FFCP PHASE1:Mm9::chr1:164816643..164816668,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=55990|HGNC=|MCL_coexpression_id=126|UniProt=Q8K2I3|association_with_transcript=0bp_to_uc007dgz.1_5end|description=CAGE_peak_9_at_Fmo2_5end|id=chr1:164816643..164816668,-|ontology_enrichment_celltype=CL:0000239!4.35e-19!6;CL:0000677!4.35e-19!6;CL:0000212!4.35e-19!6;CL:0000584!4.35e-19!6;CL:0000075!2.82e-16!7;CL:0002563!1.60e-12!9;CL:0002251!1.60e-12!9;CL:0000473!7.17e-11!3;CL:0000627!7.17e-11!3;CL:0000682!7.17e-11!3;CL:0000066!3.31e-09!25;CL:0002076!2.97e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-30,6;CL:0000677,2.65e-30,6;CL:0000584,2.65e-30,6;CL:0000075,6.09e-26,7;CL:0002563,4.05e-20,9;CL:0002251,4.05e-20,9;CL:0000682,8.31e-17,3;CL:0000066,8.90e-16,25;CL:0002076,6.13e-12,15;CL:0000223,7.40e-09,20;CL:0000473,1.70e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.22e-24!15;UBERON:0001242!3.08e-19!13;UBERON:0000060!3.08e-19!13;UBERON:0001262!3.08e-19!13;UBERON:0004786!3.08e-19!13;UBERON:0000160!1.97e-15!43;UBERON:0004923!1.38e-14!24;UBERON:0003350!1.60e-12!9;UBERON:0004808!1.60e-12!9;UBERON:0001277!1.60e-12!9;UBERON:0005409!7.36e-12!59;UBERON:0000331!5.74e-11!3;UBERON:0002116!5.74e-11!3;UBERON:0001204!5.74e-11!3;UBERON:0001168!5.74e-11!3;UBERON:0000485!3.96e-10!11;UBERON:0001962!2.09e-07!2;UBERON:0001961!2.09e-07!2;UBERON:0001744!2.09e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.35e-40,15;UBERON:0001242,2.08e-31,13;UBERON:0001262,2.08e-31,13;UBERON:0004786,2.08e-31,13;UBERON:0004923,1.03e-24,24;UBERON:0003350,4.05e-20,9;UBERON:0004808,4.05e-20,9;UBERON:0001277,4.05e-20,9;UBERON:0000331,5.76e-17,3;UBERON:0002116,5.76e-17,3;UBERON:0001204,5.76e-17,3;UBERON:0001168,5.76e-17,3;UBERON:0000485,2.09e-16,11;UBERON:0002108,7.23e-13,4;UBERON:0000160,1.49e-12,31;UBERON:0001962,3.86e-11,2;UBERON:0001961,3.86e-11,2;UBERON:0001744,3.86e-11,2;UBERON:0005409,6.92e-08,47;UBERON:0002465,1.02e-07,3|phase1_expression=0,10.8182376368202,4.09499315450582,3.0246421130683,4.50806156951712,3.18970616632591,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,3.19984845586813,3.89995777814189,8.6134794617253,6.8921919385452,6.24866574789078,20.9025761402011,19.4063199915147,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.17955448579708,0,0,0,0,0,0,0,0,0,0,12.9027784082538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Fmo2}} | ||
|EntrezGene=55990 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=Q8K2I3 | |||
|association_with_transcript=0bp_to_uc007dgz.1_5end | |||
|description=CAGE_peak_9_at_Fmo2_5end | |||
|id=chr1:164816643..164816668,- | |||
|ontology_enrichment_celltype=CL:0000239!4.35e-19!6;CL:0000677!4.35e-19!6;CL:0000212!4.35e-19!6;CL:0000584!4.35e-19!6;CL:0000075!2.82e-16!7;CL:0002563!1.60e-12!9;CL:0002251!1.60e-12!9;CL:0000473!7.17e-11!3;CL:0000627!7.17e-11!3;CL:0000682!7.17e-11!3;CL:0000066!3.31e-09!25;CL:0002076!2.97e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-30,6;CL:0000677,2.65e-30,6;CL:0000584,2.65e-30,6;CL:0000075,6.09e-26,7;CL:0002563,4.05e-20,9;CL:0002251,4.05e-20,9;CL:0000682,8.31e-17,3;CL:0000066,8.90e-16,25;CL:0002076,6.13e-12,15;CL:0000223,7.40e-09,20;CL:0000473,1.70e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.22e-24!15;UBERON:0001242!3.08e-19!13;UBERON:0000060!3.08e-19!13;UBERON:0001262!3.08e-19!13;UBERON:0004786!3.08e-19!13;UBERON:0000160!1.97e-15!43;UBERON:0004923!1.38e-14!24;UBERON:0003350!1.60e-12!9;UBERON:0004808!1.60e-12!9;UBERON:0001277!1.60e-12!9;UBERON:0005409!7.36e-12!59;UBERON:0000331!5.74e-11!3;UBERON:0002116!5.74e-11!3;UBERON:0001204!5.74e-11!3;UBERON:0001168!5.74e-11!3;UBERON:0000485!3.96e-10!11;UBERON:0001962!2.09e-07!2;UBERON:0001961!2.09e-07!2;UBERON:0001744!2.09e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.35e-40,15;UBERON:0001242,2.08e-31,13;UBERON:0001262,2.08e-31,13;UBERON:0004786,2.08e-31,13;UBERON:0004923,1.03e-24,24;UBERON:0003350,4.05e-20,9;UBERON:0004808,4.05e-20,9;UBERON:0001277,4.05e-20,9;UBERON:0000331,5.76e-17,3;UBERON:0002116,5.76e-17,3;UBERON:0001204,5.76e-17,3;UBERON:0001168,5.76e-17,3;UBERON:0000485,2.09e-16,11;UBERON:0002108,7.23e-13,4;UBERON:0000160,1.49e-12,31;UBERON:0001962,3.86e-11,2;UBERON:0001961,3.86e-11,2;UBERON:0001744,3.86e-11,2;UBERON:0005409,6.92e-08,47;UBERON:0002465,1.02e-07,3 | |||
|phase1_expression=0,10.8182376368202,4.09499315450582,3.0246421130683,4.50806156951712,3.18970616632591,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,3.19984845586813,3.89995777814189,8.6134794617253,6.8921919385452,6.24866574789078,20.9025761402011,19.4063199915147,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.17955448579708,0,0,0,0,0,0,0,0,0,0,12.9027784082538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Fmo2 | |||
}} |
Revision as of 19:28, 13 September 2013
Short description: | p9@Fmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Fmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_uc007dgz.1_5end |
EntrezGene: | Fmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.65e-30 | 6 |
gut absorptive cell | 2.65e-30 | 6 |
enterocyte | 2.65e-30 | 6 |
columnar/cuboidal epithelial cell | 6.09e-26 | 7 |
intestinal epithelial cell | 4.05e-20 | 9 |
epithelial cell of alimentary canal | 4.05e-20 | 9 |
M cell of gut | 8.31e-17 | 3 |
epithelial cell | 8.90e-16 | 25 |
endo-epithelial cell | 6.13e-12 | 15 |
endodermal cell | 7.40e-09 | 20 |
defensive cell | 1.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.35e-40 | 15 |
intestinal mucosa | 2.08e-31 | 13 |
wall of intestine | 2.08e-31 | 13 |
gastrointestinal system mucosa | 2.08e-31 | 13 |
organ component layer | 1.03e-24 | 24 |
epithelium of mucosa | 4.05e-20 | 9 |
gastrointestinal system epithelium | 4.05e-20 | 9 |
intestinal epithelium | 4.05e-20 | 9 |
ileal mucosa | 5.76e-17 | 3 |
ileum | 5.76e-17 | 3 |
mucosa of small intestine | 5.76e-17 | 3 |
wall of small intestine | 5.76e-17 | 3 |
simple columnar epithelium | 2.09e-16 | 11 |
small intestine | 7.23e-13 | 4 |
intestine | 1.49e-12 | 31 |
gut-associated lymphoid tissue | 3.86e-11 | 2 |
mucosa-associated lymphoid tissue | 3.86e-11 | 2 |
lymphoid tissue | 3.86e-11 | 2 |
gastrointestinal system | 6.92e-08 | 47 |
lymphoid system | 1.02e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.