FFCP PHASE1:Hg19::chr6:24851973..24851977,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1976|description=CAGE_peak_at_chr6:24851973..24851977,-|id=chr6:24851973..24851977,-|ontology_enrichment_celltype=CL:0000542!6.80e-24!53;CL:0000051!6.80e-24!53;CL:0000838!6.23e-23!52;CL:0002087!3.09e-22!119;CL:0000738!8.32e-22!140;CL:0002031!1.57e-18!124;CL:0000791!1.85e-18!18;CL:0000789!1.85e-18!18;CL:0002420!1.85e-18!18;CL:0002419!1.85e-18!18;CL:0000790!1.85e-18!18;CL:0000037!1.42e-15!172;CL:0000566!1.42e-15!172;CL:0000084!5.82e-14!25;CL:0000827!5.82e-14!25;CL:0000988!7.53e-14!182;CL:0002032!1.56e-13!165;CL:0000837!1.56e-13!165;CL:0000625!4.15e-12!11;CL:0000945!5.29e-09!24;CL:0000826!5.29e-09!24;CL:0000236!4.12e-07!14;CL:0000624!5.45e-07!6|ontology_enrichment_celltype_v019=CL:0000236;5.84e-20;13!CL:0000542;5.67e-12;53!CL:0000625;9.87e-11;11!CL:0000945;1.34e-10;24!CL:0000791;6.62e-10;18!CL:0000789;6.62e-10;18!CL:0002419;6.62e-10;18!CL:0000895;1.42e-08;1!CL:0000084;4.43e-07;25|ontology_enrichment_celltype_v019_2=CL:0000236,1.45e-18,14;CL:0000838,4.69e-15,52;CL:0000542,9.78e-15,53;CL:0000051,9.78e-15,53;CL:0000625,1.04e-10,11;CL:0000945,1.24e-10,24;CL:0000826,1.24e-10,24;CL:0000791,7.44e-10,18;CL:0000789,7.44e-10,18;CL:0002420,7.44e-10,18;CL:0002419,7.44e-10,18;CL:0000790,7.44e-10,18;CL:0000810,1.91e-08,1;CL:0000895,1.91e-08,1;CL:0002436,1.91e-08,1;CL:0002427,1.91e-08,1;CL:0002428,1.91e-08,1;CL:0002429,1.91e-08,1;CL:0002433,1.91e-08,1;CL:0002431,1.91e-08,1;CL:0002432,1.91e-08,1;CL:0000084,4.80e-07,25;CL:0000827,4.80e-07,25|ontology_enrichment_development_v019=CL:0000051;5.67e-12;53!CL:0000790;6.62e-10;18!CL:0002427;1.42e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!5.44e-11!15;UBERON:0000179!5.44e-11!15;UBERON:0000463!5.44e-11!15;UBERON:0002390!3.43e-10!102;UBERON:0003061!3.43e-10!102;UBERON:0002193!3.86e-09!112;UBERON:0004177!5.31e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-31;15!UBERON:0000179;1.02e-31;15!UBERON:0000463;1.02e-31;15!UBERON:0002390;1.51e-13;32!UBERON:0002193;7.73e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-31,15;UBERON:0000179,1.02e-31,15;UBERON:0000463,1.02e-31,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.300353785683013,0,0.285012743741249,0.59675003159727,0,0,0.546138611262131,1.77901850772711,4.26730222566507,1.20118796110804,1.14950487990897,1.98313461835459,3.81621501814146,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,1.4203434172042,0,0,0.589211814949674,0.443067789167242,0.541607727530031,1.66518715643378,0.780356085359269,2.79544437826249,0.829050053357545,0,1.33457906845854,3.47803076516627,2.09071047609954,0.566546713487831,1.14966148080576,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.752875595388864,1.02389288923535,1.24930726552346,1.4206635122641,0.821127996921047,0,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,6.117097657139,5.12682468456746,3.81170840732462,3.29089818468955,5.18778648954174,4.32025149790492,3.96562588147135,0,0,0,0.185803175125719,0.144269212976445,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1976 | |||
|description=CAGE_peak_at_chr6:24851973..24851977,- | |||
|id=chr6:24851973..24851977,- | |||
|ontology_enrichment_celltype=CL:0000542!6.80e-24!53;CL:0000051!6.80e-24!53;CL:0000838!6.23e-23!52;CL:0002087!3.09e-22!119;CL:0000738!8.32e-22!140;CL:0002031!1.57e-18!124;CL:0000791!1.85e-18!18;CL:0000789!1.85e-18!18;CL:0002420!1.85e-18!18;CL:0002419!1.85e-18!18;CL:0000790!1.85e-18!18;CL:0000037!1.42e-15!172;CL:0000566!1.42e-15!172;CL:0000084!5.82e-14!25;CL:0000827!5.82e-14!25;CL:0000988!7.53e-14!182;CL:0002032!1.56e-13!165;CL:0000837!1.56e-13!165;CL:0000625!4.15e-12!11;CL:0000945!5.29e-09!24;CL:0000826!5.29e-09!24;CL:0000236!4.12e-07!14;CL:0000624!5.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.84e-20;13!CL:0000542;5.67e-12;53!CL:0000625;9.87e-11;11!CL:0000945;1.34e-10;24!CL:0000791;6.62e-10;18!CL:0000789;6.62e-10;18!CL:0002419;6.62e-10;18!CL:0000895;1.42e-08;1!CL:0000084;4.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.45e-18,14;CL:0000838,4.69e-15,52;CL:0000542,9.78e-15,53;CL:0000051,9.78e-15,53;CL:0000625,1.04e-10,11;CL:0000945,1.24e-10,24;CL:0000826,1.24e-10,24;CL:0000791,7.44e-10,18;CL:0000789,7.44e-10,18;CL:0002420,7.44e-10,18;CL:0002419,7.44e-10,18;CL:0000790,7.44e-10,18;CL:0000810,1.91e-08,1;CL:0000895,1.91e-08,1;CL:0002436,1.91e-08,1;CL:0002427,1.91e-08,1;CL:0002428,1.91e-08,1;CL:0002429,1.91e-08,1;CL:0002433,1.91e-08,1;CL:0002431,1.91e-08,1;CL:0002432,1.91e-08,1;CL:0000084,4.80e-07,25;CL:0000827,4.80e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;5.67e-12;53!CL:0000790;6.62e-10;18!CL:0002427;1.42e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.44e-11!15;UBERON:0000179!5.44e-11!15;UBERON:0000463!5.44e-11!15;UBERON:0002390!3.43e-10!102;UBERON:0003061!3.43e-10!102;UBERON:0002193!3.86e-09!112;UBERON:0004177!5.31e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-31;15!UBERON:0000179;1.02e-31;15!UBERON:0000463;1.02e-31;15!UBERON:0002390;1.51e-13;32!UBERON:0002193;7.73e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-31,15;UBERON:0000179,1.02e-31,15;UBERON:0000463,1.02e-31,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.300353785683013,0,0.285012743741249,0.59675003159727,0,0,0.546138611262131,1.77901850772711,4.26730222566507,1.20118796110804,1.14950487990897,1.98313461835459,3.81621501814146,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,1.4203434172042,0,0,0.589211814949674,0.443067789167242,0.541607727530031,1.66518715643378,0.780356085359269,2.79544437826249,0.829050053357545,0,1.33457906845854,3.47803076516627,2.09071047609954,0.566546713487831,1.14966148080576,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.752875595388864,1.02389288923535,1.24930726552346,1.4206635122641,0.821127996921047,0,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,6.117097657139,5.12682468456746,3.81170840732462,3.29089818468955,5.18778648954174,4.32025149790492,3.96562588147135,0,0,0,0.185803175125719,0.144269212976445,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr6:24851973..24851977,- | |||
}} |
Revision as of 19:41, 13 September 2013
Short description: | p@chr6:24851973..24851977, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:24851973..24851977, - |
Coexpression cluster: | C1976_Neutrophils_Whole_Eosinophils_CD8_CD19_CD4_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.45e-18 | 14 |
lymphoid lineage restricted progenitor cell | 4.69e-15 | 52 |
lymphocyte | 9.78e-15 | 53 |
common lymphoid progenitor | 9.78e-15 | 53 |
CD8-positive, alpha-beta T cell | 1.04e-10 | 11 |
lymphocyte of B lineage | 1.24e-10 | 24 |
pro-B cell | 1.24e-10 | 24 |
mature alpha-beta T cell | 7.44e-10 | 18 |
alpha-beta T cell | 7.44e-10 | 18 |
immature T cell | 7.44e-10 | 18 |
mature T cell | 7.44e-10 | 18 |
immature alpha-beta T cell | 7.44e-10 | 18 |
CD4-positive, alpha-beta thymocyte | 1.91e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.91e-08 | 1 |
mature CD4 single-positive thymocyte | 1.91e-08 | 1 |
resting double-positive thymocyte | 1.91e-08 | 1 |
double-positive blast | 1.91e-08 | 1 |
CD69-positive double-positive thymocyte | 1.91e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.91e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.91e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.91e-08 | 1 |
T cell | 4.80e-07 | 25 |
pro-T cell | 4.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 1.02e-31 | 15 |
haemolymphatic fluid | 1.02e-31 | 15 |
organism substance | 1.02e-31 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.