FFCP PHASE1:Mm9::chr1:53370480..53370526,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72085|HGNC=|MCL_coexpression_id=2692|UniProt=Q6PEB4|association_with_transcript=0bp_to_ENSMUST00000114484,ENSMUST00000135614,ENSMUST00000135786,ENSMUST00000151296,ENSMUST00000153939,ENSMUST00000164503,NM_028091,uc007aza.1,uc007azb.1,uc007azc.1,uc011wkt.1_5end|description=CAGE_peak_1_at_Osgepl1_5end|id=chr1:53370480..53370526,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.32e-10!47;UBERON:0005172!1.74e-09!49;UBERON:0005173!1.74e-09!49;UBERON:0002417!1.74e-09!49;UBERON:0000916!1.74e-09!49;UBERON:0004111!8.83e-08!122;UBERON:0000025!1.33e-07!114;UBERON:0002107!2.51e-07!22;UBERON:0007499!2.51e-07!22;UBERON:0006925!2.51e-07!22;UBERON:0009497!2.51e-07!22;UBERON:0000015!2.51e-07!22;UBERON:0002423!2.51e-07!22;UBERON:0006235!2.51e-07!22;UBERON:0008835!2.51e-07!22;UBERON:0003894!2.51e-07!22;UBERON:0004161!2.51e-07!22;UBERON:0008836!2.51e-07!22;UBERON:0009854!6.50e-07!23;UBERON:0009856!6.50e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.32e-10,47;UBERON:0005172,1.74e-09,49;UBERON:0005173,1.74e-09,49;UBERON:0002417,1.74e-09,49;UBERON:0000916,1.74e-09,49;UBERON:0004111,8.82e-08,122;UBERON:0000025,1.33e-07,114;UBERON:0002107,2.51e-07,22;UBERON:0007499,2.51e-07,22;UBERON:0006925,2.51e-07,22;UBERON:0009497,2.51e-07,22;UBERON:0000015,2.51e-07,22;UBERON:0002423,2.51e-07,22;UBERON:0006235,2.51e-07,22;UBERON:0008835,2.51e-07,22;UBERON:0003894,2.51e-07,22;UBERON:0004161,2.51e-07,22;UBERON:0008836,2.51e-07,22;UBERON:0009854,6.50e-07,23;UBERON:0009856,6.50e-07,23;UBERON:0005177,6.77e-07,79|phase1_expression=10.4096750618116,5.58360652222978,4.54999239389536,3.32710632437513,2.50447864973174,6.88305014838748,9.81173090501208,9.55512593467664,1.267098499365,0.468129052643987,3.4243593645101,3.11111420081812,7.53283211697305,7.95525662012876,12.9912807108108,21.0574278085419,27.9824751251259,15.1421839371954,16.5908464662944,10.6097412949508,25.7681169157741,8.53902180327614,9.92559198727954,11.8394392867121,14.2233754261645,5.16808767703518,7.75371593086335,9.04979177280734,11.2113817479261,11.5933859689568,9.75614246883341,8.25539875497521,7.99584223859941,0,15.5979874665688,15.9585259544153,15.9252097884648,15.9042019680025,13.2827008569046,17.2762835511353,7.64700934440319,11.6117732442936,6.79714494243615,8.43508680436368,7.90740063512214,7.89251034295231,2.34717403304412,3.2703773457067,2.63623419281366,3.88859798148567,4.89952475688769,1.43752564364972,12.2481302422148,3.62681071005672,4.03312558970957,7.71778308107841,7.73640287834643,13.9231464914909,7.28339259094552,4.7609188134483,3.80298842103708,1.69422266034566,0,0.899899717281399,1.97773272513395,0,2.39680088414724,3.45796474789399,9.85051316930538,7.83034442323806,6.09942387919008,4.57041575046086,9.49734726091938,7.10446635446733,9.39285615978716,6.43453150627015,7.70811166995721,19.5361627270337,15.5142598588806,5.27545150920775,7.31901148819277,9.37644067002168,15.9134309430787,18.0084035210138,16.5022107598955,9.72274332063103,12.9558229527184,8.20157561631323,9.61722655331437,8.53958629206676,5.79728977403356,20.6501730475533,16.9992833426938,21.5881276655127,35.0879265421741,28.2256938871321,33.0044387309617,16.1908806449155,16.3665182899807,12.7202246823722,10.9857867425811,10.2661181931454,2.54805239706646,0,4.5463118612355,6.08063677140237,5.05524445014783,26.71902785426,21.4918443427153,22.2663208597237,10.5826049327343,10.9607572192371,15.681853813412,19.7446659123936,19.9900802130698,18.975655290781,5.19109432242185,34.9930443746186,13.2691582792481,14.5590164952668,26.2801406967868,21.3345111379498,11.1835056730873,24.0080253549469,19.6879904404648,13.2837668708468,8.74650408893218,6.59893004092748,6.60765180779936,22.4685959107234,23.33253074375,12.4397808591736,19.9897968221118,25.8272611903634,16.4152555202052,20.4423991465375,11.6096874789361,19.6563013563947,14.1524744722858,20.2024181651015,12.8819238533077,12.644615743841,13.3245976055958,16.4268251440929,14.9680298132921,17.1672385181699,16.4915035225123,18.6266426932091,4.95806383745537,7.94245536704841,12.3165786914764,6.79506770525482,9.17555922444473,10.447564995665,12.3469281844766,9.55364480728767,7.02213187313235,7.46308930632674,6.25159698670304,18.6413195281952,16.8858763186389,16.3856475929524,17.7558551688908,17.3152523937715,19.7461904495844,19.5328513590343,19.5839583021722,26.6224980597146,31.9246108832152,47.6085645829376,72.1512404958116,79.0941931971048,75.9643398907035,77.5713100434949,16.8231958851302,13.8921226712034,5.28670052774077,13.4869788998408,10.8777007772969,15.7920936865098,12.8867461322093,18.3532007407242,14.0098167622268,14.4571475845545,17.5575752771469,14.3288090609889,13.8234364840148,13.5290400987983,15.4021628824105,8.98819408654222,11.8875927431082,14.9355954940775,7.77638393907635,12.6815848996799,13.5249282807697,12.4227309985642,11.4431967428899,12.6945834001477,16.3150265780584,27.1602672282468,26.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| ||
|EntrezGene=72085 | |||
|HGNC= | |||
|MCL_coexpression_id=2692 | |||
|UniProt=Q6PEB4 | |||
|association_with_transcript=0bp_to_ENSMUST00000114484,ENSMUST00000135614,ENSMUST00000135786,ENSMUST00000151296,ENSMUST00000153939,ENSMUST00000164503,NM_028091,uc007aza.1,uc007azb.1,uc007azc.1,uc011wkt.1_5end | |||
|description=CAGE_peak_1_at_Osgepl1_5end | |||
|id=chr1:53370480..53370526,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.32e-10!47;UBERON:0005172!1.74e-09!49;UBERON:0005173!1.74e-09!49;UBERON:0002417!1.74e-09!49;UBERON:0000916!1.74e-09!49;UBERON:0004111!8.83e-08!122;UBERON:0000025!1.33e-07!114;UBERON:0002107!2.51e-07!22;UBERON:0007499!2.51e-07!22;UBERON:0006925!2.51e-07!22;UBERON:0009497!2.51e-07!22;UBERON:0000015!2.51e-07!22;UBERON:0002423!2.51e-07!22;UBERON:0006235!2.51e-07!22;UBERON:0008835!2.51e-07!22;UBERON:0003894!2.51e-07!22;UBERON:0004161!2.51e-07!22;UBERON:0008836!2.51e-07!22;UBERON:0009854!6.50e-07!23;UBERON:0009856!6.50e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.32e-10,47;UBERON:0005172,1.74e-09,49;UBERON:0005173,1.74e-09,49;UBERON:0002417,1.74e-09,49;UBERON:0000916,1.74e-09,49;UBERON:0004111,8.82e-08,122;UBERON:0000025,1.33e-07,114;UBERON:0002107,2.51e-07,22;UBERON:0007499,2.51e-07,22;UBERON:0006925,2.51e-07,22;UBERON:0009497,2.51e-07,22;UBERON:0000015,2.51e-07,22;UBERON:0002423,2.51e-07,22;UBERON:0006235,2.51e-07,22;UBERON:0008835,2.51e-07,22;UBERON:0003894,2.51e-07,22;UBERON:0004161,2.51e-07,22;UBERON:0008836,2.51e-07,22;UBERON:0009854,6.50e-07,23;UBERON:0009856,6.50e-07,23;UBERON:0005177,6.77e-07,79 | |||
|phase1_expression=10.4096750618116,5.58360652222978,4.54999239389536,3.32710632437513,2.50447864973174,6.88305014838748,9.81173090501208,9.55512593467664,1.267098499365,0.468129052643987,3.4243593645101,3.11111420081812,7.53283211697305,7.95525662012876,12.9912807108108,21.0574278085419,27.9824751251259,15.1421839371954,16.5908464662944,10.6097412949508,25.7681169157741,8.53902180327614,9.92559198727954,11.8394392867121,14.2233754261645,5.16808767703518,7.75371593086335,9.04979177280734,11.2113817479261,11.5933859689568,9.75614246883341,8.25539875497521,7.99584223859941,0,15.5979874665688,15.9585259544153,15.9252097884648,15.9042019680025,13.2827008569046,17.2762835511353,7.64700934440319,11.6117732442936,6.79714494243615,8.43508680436368,7.90740063512214,7.89251034295231,2.34717403304412,3.2703773457067,2.63623419281366,3.88859798148567,4.89952475688769,1.43752564364972,12.2481302422148,3.62681071005672,4.03312558970957,7.71778308107841,7.73640287834643,13.9231464914909,7.28339259094552,4.7609188134483,3.80298842103708,1.69422266034566,0,0.899899717281399,1.97773272513395,0,2.39680088414724,3.45796474789399,9.85051316930538,7.83034442323806,6.09942387919008,4.57041575046086,9.49734726091938,7.10446635446733,9.39285615978716,6.43453150627015,7.70811166995721,19.5361627270337,15.5142598588806,5.27545150920775,7.31901148819277,9.37644067002168,15.9134309430787,18.0084035210138,16.5022107598955,9.72274332063103,12.9558229527184,8.20157561631323,9.61722655331437,8.53958629206676,5.79728977403356,20.6501730475533,16.9992833426938,21.5881276655127,35.0879265421741,28.2256938871321,33.0044387309617,16.1908806449155,16.3665182899807,12.7202246823722,10.9857867425811,10.2661181931454,2.54805239706646,0,4.5463118612355,6.08063677140237,5.05524445014783,26.71902785426,21.4918443427153,22.2663208597237,10.5826049327343,10.9607572192371,15.681853813412,19.7446659123936,19.9900802130698,18.975655290781,5.19109432242185,34.9930443746186,13.2691582792481,14.5590164952668,26.2801406967868,21.3345111379498,11.1835056730873,24.0080253549469,19.6879904404648,13.2837668708468,8.74650408893218,6.59893004092748,6.60765180779936,22.4685959107234,23.33253074375,12.4397808591736,19.9897968221118,25.8272611903634,16.4152555202052,20.4423991465375,11.6096874789361,19.6563013563947,14.1524744722858,20.2024181651015,12.8819238533077,12.644615743841,13.3245976055958,16.4268251440929,14.9680298132921,17.1672385181699,16.4915035225123,18.6266426932091,4.95806383745537,7.94245536704841,12.3165786914764,6.79506770525482,9.17555922444473,10.447564995665,12.3469281844766,9.55364480728767,7.02213187313235,7.46308930632674,6.25159698670304,18.6413195281952,16.8858763186389,16.3856475929524,17.7558551688908,17.3152523937715,19.7461904495844,19.5328513590343,19.5839583021722,26.6224980597146,31.9246108832152,47.6085645829376,72.1512404958116,79.0941931971048,75.9643398907035,77.5713100434949,16.8231958851302,13.8921226712034,5.28670052774077,13.4869788998408,10.8777007772969,15.7920936865098,12.8867461322093,18.3532007407242,14.0098167622268,14.4571475845545,17.5575752771469,14.3288090609889,13.8234364840148,13.5290400987983,15.4021628824105,8.98819408654222,11.8875927431082,14.9355954940775,7.77638393907635,12.6815848996799,13.5249282807697,12.4227309985642,11.4431967428899,12.6945834001477,16.3150265780584,27.1602672282468,26.6897837330337,22.7050781616113,26.3842838107563,18.1861165230543,17.8868685553015,26.9834534861824,22.1117532313468,20.9824128984603,15.786802810448,13.2340223227373,15.5649817704034,22.7885972946108,17.2521847832825,13.3970741160661,25.2750515222794,27.025939940341,36.9558671855139,28.4641677604387,14.041242452662,11.1799932944586,14.9927778326664,11.3729207469376,12.2038929110021,15.0755631697634,16.1869675802489,10.5372169843211,13.5566223931324,12.1805579306826,10.8429242687091,11.6342953448174,14.3328534948693,12.43981903801,10.5553898757491,4.89515115436839,10.3270497333998,9.3818493743609,24.2431390881566,21.4497386463732,6.72133276044369,49.7367726592615,9.4652465824877,10.5418460960092,7.53981892064796,5.9742199488138,8.24355094104858,5.09537755419898,7.2865926301481,8.18316402151673,11.0680577825027,21.5285282002611,16.890870139784,4.80777129901589,10.750539317336,12.5377293459127,13.2745138339963,8.74010290157933,12.3952658355548,20.9351638529047,8.85905678642318,14.4494519533646,13.9551278310839,14.1778154496227,15.6858846489277,19.5942789920206,15.8127912862498,15.470331487228,20.0859367394735,14.2248264284735,7.76152102696527,17.361299837559,19.8621061679346,12.8425548673491,12.176627524557,5.78483403317739,3.05073220482823,6.35496212591461,16.9806866502321,15.3344215235576,14.0474051225438,11.1578911117088,10.2660215842697,9.19189038572343,18.0718118710507,24.1052892613663,17.428829841381,10.5257302661243,20.3713980106683,18.6484772434644,28.4323993659732,21.7339264546196,7.47905091972963,7.83728133012485,6.35719879500349,14.3200592702267,12.4952717464548,12.6058069618646,12.0965981720417,9.19988502463662,9.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| |||
|short_description=p1@Osgepl1 | |||
}} |
Revision as of 20:31, 13 September 2013
Short description: | p1@Osgepl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Osgepl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2692 |
Association with transcript: | 0bp_to_ENSMUST00000114484, ENSMUST00000135614, ENSMUST00000135786, ENSMUST00000151296, ENSMUST00000153939, ENSMUST00000164503, NM_028091, uc007aza.1, uc007azb.1, uc007azc.1, uc011wkt.1_5end |
EntrezGene: | Osgepl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.32e-10 | 47 |
abdomen element | 1.74e-09 | 49 |
abdominal segment element | 1.74e-09 | 49 |
abdominal segment of trunk | 1.74e-09 | 49 |
abdomen | 1.74e-09 | 49 |
anatomical conduit | 8.82e-08 | 122 |
tube | 1.33e-07 | 114 |
liver | 2.51e-07 | 22 |
epithelial sac | 2.51e-07 | 22 |
digestive gland | 2.51e-07 | 22 |
epithelium of foregut-midgut junction | 2.51e-07 | 22 |
anatomical boundary | 2.51e-07 | 22 |
hepatobiliary system | 2.51e-07 | 22 |
foregut-midgut junction | 2.51e-07 | 22 |
hepatic diverticulum | 2.51e-07 | 22 |
liver primordium | 2.51e-07 | 22 |
septum transversum | 2.51e-07 | 22 |
liver bud | 2.51e-07 | 22 |
digestive tract diverticulum | 6.50e-07 | 23 |
sac | 6.50e-07 | 23 |
trunk region element | 6.77e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.