FFCP PHASE1:Mm9::chr2:11414279..11414290,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:11414279..11414290,-|id=chr2:11414279..11414290,-|ontology_enrichment_celltype=CL:0000075!2.33e-10!7;CL:0000473!4.75e-10!3;CL:0000627!4.75e-10!3;CL:0000682!4.75e-10!3;CL:0000239!2.44e-08!6;CL:0000677!2.44e-08!6;CL:0000212!2.44e-08!6;CL:0000584!2.44e-08!6|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,4.21e-14,25;CL:0000473,2.31e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!8.64e-10!3;UBERON:0000344!4.21e-09!15;UBERON:0001962!3.44e-07!2;UBERON:0001961!3.44e-07!2;UBERON:0001744!3.44e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,1.59e-20,2;UBERON:0001961,1.59e-20,2;UBERON:0001744,1.59e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,4.93e-14,3;UBERON:0001242,3.01e-12,13;UBERON:0001262,3.01e-12,13;UBERON:0004786,3.01e-12,13;UBERON:0003199,3.65e-11,1;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0000485,1.33e-08,11|phase1_expression=0,2.79180326111489,0.909998478779072,0,0,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,2.3998863419011,2.52350209173887,1.14846392823004,5.1691439539089,5.817723282519,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr2:11414279..11414290,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:11414279..11414290,- | |||
|id=chr2:11414279..11414290,- | |||
|ontology_enrichment_celltype=CL:0000075!2.33e-10!7;CL:0000473!4.75e-10!3;CL:0000627!4.75e-10!3;CL:0000682!4.75e-10!3;CL:0000239!2.44e-08!6;CL:0000677!2.44e-08!6;CL:0000212!2.44e-08!6;CL:0000584!2.44e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,4.21e-14,25;CL:0000473,2.31e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!8.64e-10!3;UBERON:0000344!4.21e-09!15;UBERON:0001962!3.44e-07!2;UBERON:0001961!3.44e-07!2;UBERON:0001744!3.44e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,1.59e-20,2;UBERON:0001961,1.59e-20,2;UBERON:0001744,1.59e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,4.93e-14,3;UBERON:0001242,3.01e-12,13;UBERON:0001262,3.01e-12,13;UBERON:0004786,3.01e-12,13;UBERON:0003199,3.65e-11,1;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0000485,1.33e-08,11 | |||
|phase1_expression=0,2.79180326111489,0.909998478779072,0,0,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,2.3998863419011,2.52350209173887,1.14846392823004,5.1691439539089,5.817723282519,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr2:11414279..11414290,- | |||
}} |
Revision as of 21:40, 13 September 2013
Short description: | p@chr2:11414279..11414290, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:11414279..11414290, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.62e-30 | 3 |
brush border epithelial cell | 3.13e-15 | 6 |
gut absorptive cell | 3.13e-15 | 6 |
enterocyte | 3.13e-15 | 6 |
epithelial cell | 4.21e-14 | 25 |
defensive cell | 2.31e-13 | 7 |
columnar/cuboidal epithelial cell | 3.73e-13 | 7 |
intestinal epithelial cell | 2.23e-10 | 9 |
epithelial cell of alimentary canal | 2.23e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.51e-23 | 15 |
gut-associated lymphoid tissue | 1.59e-20 | 2 |
mucosa-associated lymphoid tissue | 1.59e-20 | 2 |
lymphoid tissue | 1.59e-20 | 2 |
organ component layer | 1.61e-14 | 24 |
lymphoid system | 4.93e-14 | 3 |
intestinal mucosa | 3.01e-12 | 13 |
wall of intestine | 3.01e-12 | 13 |
gastrointestinal system mucosa | 3.01e-12 | 13 |
egg chamber | 3.65e-11 | 1 |
epithelium of mucosa | 2.23e-10 | 9 |
gastrointestinal system epithelium | 2.23e-10 | 9 |
intestinal epithelium | 2.23e-10 | 9 |
simple columnar epithelium | 1.33e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.