FFCP PHASE1:Mm9::chr2:122436958..122436969,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67092|HGNC=|MCL_coexpression_id=2328|UniProt=Q9D964|association_with_transcript=43bp_to_NM_025961,uc008maw.2_5end|description=CAGE_peak_2_at_Gatm_5end|id=chr2:122436958..122436969,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002323!2.80e-07!37;UBERON:0004458!2.80e-07!37;UBERON:0003886!5.96e-07!38|ontology_enrichment_uberon_v019_2=UBERON:0002323,4.36e-07,37;UBERON:0004458,4.36e-07,37|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,2.99798785634096,2.22722794128809,4.89693314689703,0.315462165358238,0,0.42438965179803,4.84746753861098,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.837063261473815,3.1253413780952,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,2.34717403304412,1.74420125104357,0,0.194429899074283,3.49966054063406,1.43752564364972,0,0,0,0,0.573066879877513,1.03134418455488,0,0.528990979272033,3.1691570175309,1.0165335962074,0.889294796111139,17.997994345628,15.8218618010716,12.7886420690298,17.0772062995491,12.6792040756113,0.103689612308478,0.405017814995072,1.05162480675691,13.139945282575,11.9269012113871,0.979926393719632,0.862609239164127,0,6.60695285996332,12.3856717942632,10.752457327937,1.97829431595291,1.64677758484337,1.04182674111352,13.4007839520663,12.380777420697,10.3902808488231,4.71405736757868,8.39992916714707,2.42319279572891,11.2832028066444,17.8348881852014,5.50742528533188,1.72084775396277,0,1.07940638327563,0,0,1.82577746171277,0.852151612890289,1.29893002301434,0.70667914902068,5.49289337129054,0,0,0,0,0.253359865475099,0,2.16949371466214,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,1.99900802130698,0.376999773989026,0.741584903203122,0.144599356919912,2.65383165584962,10.0295446967394,0.662524555381181,0.969750506270444,1.86391761218122,3.80615036115011,2.93225389538837,1.78819938646014,0.479260498023681,1.79970819298022,1.01656181658452,9.8861822007183,7.77751024791665,3.01570445070875,5.73620256634512,3.3243009452943,13.0906468072523,3.24482526135515,0.81471491080253,0.622034853050465,0.505445516867349,0.631325567659422,0.520481771850815,0.229902104433473,0.540186389416048,0.753524089178575,0.680364991513279,1.15302348256365,2.24884138943349,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,0,3.83077383174383,0.823128545631774,2.7864797354589,1.40442637462647,2.31613116403244,1.13665399758237,0.828503090142008,0.469052119962192,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0.536546802799238,0.583826711835847,0.658239399653922,0,0.810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,4.6263788684108,2.36680608472354,0.991256348951394,0.264450566663544,0.639864751605702,0.232236671860439,0.257734922644187,0.80673409849337,0.22237804384487,4.37518940058886,0.474529061544512,4.94096864172033,4.77536896720512,2.78539060857611,2.9244613067868,0,0.648414149624083,0.597423819763102,0.758671603812327,0.685491075658373,2.25415471346161,2.8511185898344,5.23671715352589,7.99548346749632,9.23253442014156,14.9086249459398,14.2868842335651,18.5095745882701,1.1858105083486,0.667380422864376,0.589676985339609,0.674586337154561,1.01430060694251,1.4470629585145,1.78238096246994,1.72617682470486,1.78348749452539,1.64736847912849,1.43768206527355,2.60498663367952,2.18426371180192,3.03094653536534,1.07638448113147,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,6.03165135757089,5.98296252200581,0.491764273019036,0.827810238914197,15.7339578188036,10.6662634798905,0,3.28212205365685,0.315508219416257,0,2.15423397732799,0.716906393857656,1.33679204449436,1.41538265394416,0,0,0,5.46246237917072,2.55492153374884,2.67098405500883,2.44330439030364,3.13443233647817,23.8941249011933,0.242780636154981,0.302323556964751,3.39489143560617,7.38254732201932,13.2197113615889,9.30341855405596,25.0838273339479,17.1118741624666,17.6980584444057,20.0295356292498,29.9093075419742,0.340439605753788,0.36012218806262,0.258717367565509,0.857348140126369,0.354680467284547,0.535106452806212,0.822745103010605,0.913394847343798,21.5897971418614,5.71946591332314,0.661585194164886,0.8244312647074,2.42196640043858,1.5078231232039,0.954978752025092,0.492422699235184,1.1659233465194,16.8737024829564,2.39219233116994,0.619160603889667,0.740778109478847,3.20226376907975,3.8274383761887,1.60144721244566,0,0.139951452323658,0.690999869022119,2.86401185404534,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,1.48350781023303,1.07449492442937,0.523511883968059,0,0,9.01908701894705,5.23307911153926,4.13646226142744,3.88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| ||
|EntrezGene=67092 | |||
|HGNC= | |||
|MCL_coexpression_id=2328 | |||
|UniProt=Q9D964 | |||
|association_with_transcript=43bp_to_NM_025961,uc008maw.2_5end | |||
|description=CAGE_peak_2_at_Gatm_5end | |||
|id=chr2:122436958..122436969,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002323!2.80e-07!37;UBERON:0004458!2.80e-07!37;UBERON:0003886!5.96e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002323,4.36e-07,37;UBERON:0004458,4.36e-07,37 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,2.99798785634096,2.22722794128809,4.89693314689703,0.315462165358238,0,0.42438965179803,4.84746753861098,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.837063261473815,3.1253413780952,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,2.34717403304412,1.74420125104357,0,0.194429899074283,3.49966054063406,1.43752564364972,0,0,0,0,0.573066879877513,1.03134418455488,0,0.528990979272033,3.1691570175309,1.0165335962074,0.889294796111139,17.997994345628,15.8218618010716,12.7886420690298,17.0772062995491,12.6792040756113,0.103689612308478,0.405017814995072,1.05162480675691,13.139945282575,11.9269012113871,0.979926393719632,0.862609239164127,0,6.60695285996332,12.3856717942632,10.752457327937,1.97829431595291,1.64677758484337,1.04182674111352,13.4007839520663,12.380777420697,10.3902808488231,4.71405736757868,8.39992916714707,2.42319279572891,11.2832028066444,17.8348881852014,5.50742528533188,1.72084775396277,0,1.07940638327563,0,0,1.82577746171277,0.852151612890289,1.29893002301434,0.70667914902068,5.49289337129054,0,0,0,0,0.253359865475099,0,2.16949371466214,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,1.99900802130698,0.376999773989026,0.741584903203122,0.144599356919912,2.65383165584962,10.0295446967394,0.662524555381181,0.969750506270444,1.86391761218122,3.80615036115011,2.93225389538837,1.78819938646014,0.479260498023681,1.79970819298022,1.01656181658452,9.8861822007183,7.77751024791665,3.01570445070875,5.73620256634512,3.3243009452943,13.0906468072523,3.24482526135515,0.81471491080253,0.622034853050465,0.505445516867349,0.631325567659422,0.520481771850815,0.229902104433473,0.540186389416048,0.753524089178575,0.680364991513279,1.15302348256365,2.24884138943349,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,0,3.83077383174383,0.823128545631774,2.7864797354589,1.40442637462647,2.31613116403244,1.13665399758237,0.828503090142008,0.469052119962192,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0.536546802799238,0.583826711835847,0.658239399653922,0,0.810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,4.6263788684108,2.36680608472354,0.991256348951394,0.264450566663544,0.639864751605702,0.232236671860439,0.257734922644187,0.80673409849337,0.22237804384487,4.37518940058886,0.474529061544512,4.94096864172033,4.77536896720512,2.78539060857611,2.9244613067868,0,0.648414149624083,0.597423819763102,0.758671603812327,0.685491075658373,2.25415471346161,2.8511185898344,5.23671715352589,7.99548346749632,9.23253442014156,14.9086249459398,14.2868842335651,18.5095745882701,1.1858105083486,0.667380422864376,0.589676985339609,0.674586337154561,1.01430060694251,1.4470629585145,1.78238096246994,1.72617682470486,1.78348749452539,1.64736847912849,1.43768206527355,2.60498663367952,2.18426371180192,3.03094653536534,1.07638448113147,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,6.03165135757089,5.98296252200581,0.491764273019036,0.827810238914197,15.7339578188036,10.6662634798905,0,3.28212205365685,0.315508219416257,0,2.15423397732799,0.716906393857656,1.33679204449436,1.41538265394416,0,0,0,5.46246237917072,2.55492153374884,2.67098405500883,2.44330439030364,3.13443233647817,23.8941249011933,0.242780636154981,0.302323556964751,3.39489143560617,7.38254732201932,13.2197113615889,9.30341855405596,25.0838273339479,17.1118741624666,17.6980584444057,20.0295356292498,29.9093075419742,0.340439605753788,0.36012218806262,0.258717367565509,0.857348140126369,0.354680467284547,0.535106452806212,0.822745103010605,0.913394847343798,21.5897971418614,5.71946591332314,0.661585194164886,0.8244312647074,2.42196640043858,1.5078231232039,0.954978752025092,0.492422699235184,1.1659233465194,16.8737024829564,2.39219233116994,0.619160603889667,0.740778109478847,3.20226376907975,3.8274383761887,1.60144721244566,0,0.139951452323658,0.690999869022119,2.86401185404534,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,1.48350781023303,1.07449492442937,0.523511883968059,0,0,9.01908701894705,5.23307911153926,4.13646226142744,3.88902376688095,5.16639293910924,3.54807863530634,7.27614879603675,10.1559420178281,10.0664970648682,7.00593950395418,4.03242008761012,0,0,0,0.389762468933385,0.358053391334963,0,0.240390899039938,0.443068581523732,0.201932899896295,0.228620419965,0.100826185136841,0,0,0,0.680191150845634,0.887943813496259,0,0.503653849092235,0.772758376128762,16.8914227906064,1.64836461840539,0.428736758158132,0,7.90652579663893,2.30162618253588,4.01026859407578,3.60891682921744,5.48066015816514,3.0215755895588,5.40018000185445,4.0528908290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| |||
|short_description=p2@Gatm | |||
}} | |||
Revision as of 21:54, 13 September 2013
| Short description: | p2@Gatm |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Gatm_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2328 |
| Association with transcript: | 43bp_to_NM_025961, uc008maw.2_5end |
| EntrezGene: | Gatm |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| body cavity | 4.36e-07 | 37 |
| body cavity or lining | 4.36e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
