FFCP PHASE1:Mm9::chr2:126371344..126371355,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=179|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:126371344..126371355,+|id=chr2:126371344..126371355,+|ontology_enrichment_celltype=CL:0000181!4.24e-07!5;CL:0000417!4.24e-07!5;CL:0000668!4.24e-07!5;CL:0000412!4.24e-07!5;CL:0000182!4.24e-07!5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.27e-28!22;UBERON:0007499!1.27e-28!22;UBERON:0006925!1.27e-28!22;UBERON:0009497!1.27e-28!22;UBERON:0000015!1.27e-28!22;UBERON:0002423!1.27e-28!22;UBERON:0006235!1.27e-28!22;UBERON:0008835!1.27e-28!22;UBERON:0003894!1.27e-28!22;UBERON:0004161!1.27e-28!22;UBERON:0008836!1.27e-28!22;UBERON:0009854!2.92e-27!23;UBERON:0009856!2.92e-27!23;UBERON:0005172!7.10e-25!49;UBERON:0005173!7.10e-25!49;UBERON:0002417!7.10e-25!49;UBERON:0000916!7.10e-25!49;UBERON:0002365!7.26e-25!25;UBERON:0002330!7.26e-25!25;UBERON:0009569!1.69e-17!66;UBERON:0003914!7.67e-14!47;UBERON:0005256!8.65e-14!47;UBERON:0005177!9.86e-13!85;UBERON:0005057!8.30e-11!51;UBERON:0002100!1.56e-10!98;UBERON:0002368!3.60e-10!60;UBERON:0003929!7.98e-10!55;UBERON:0002530!3.65e-09!65;UBERON:0000949!5.43e-08!72;UBERON:0003104!7.93e-08!131;UBERON:0009142!7.93e-08!131;UBERON:0000490!9.71e-08!66;UBERON:0005911!2.75e-07!69;UBERON:0002405!3.82e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.30e-11,49;UBERON:0005173,6.30e-11,49;UBERON:0002417,6.30e-11,49;UBERON:0000916,6.30e-11,49;UBERON:0003104,9.17e-09,61;UBERON:0009142,9.17e-09,61;UBERON:0002107,2.73e-08,22;UBERON:0007499,2.73e-08,22;UBERON:0006925,2.73e-08,22;UBERON:0009497,2.73e-08,22;UBERON:0000015,2.73e-08,22;UBERON:0002423,2.73e-08,22;UBERON:0006235,2.73e-08,22;UBERON:0008835,2.73e-08,22;UBERON:0003894,2.73e-08,22;UBERON:0004161,2.73e-08,22;UBERON:0008836,2.73e-08,22;UBERON:0009569,4.31e-08,66;UBERON:0009854,6.04e-08,23;UBERON:0009856,6.04e-08,23;UBERON:0002113,8.75e-08,14;UBERON:0003918,8.75e-08,14;UBERON:0011143,8.75e-08,14;UBERON:0005095,8.75e-08,14;UBERON:0007687,8.75e-08,14;UBERON:0002365,2.45e-07,25;UBERON:0002330,2.45e-07,25;UBERON:0005177,9.79e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,2.68816132258401,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,2.06654207171443,2.19798218977925,3.20832626196681,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,2.02063102357689,1.61457672169721,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr2:126371344..126371355,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:126371344..126371355,+ | |||
|id=chr2:126371344..126371355,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.24e-07!5;CL:0000417!4.24e-07!5;CL:0000668!4.24e-07!5;CL:0000412!4.24e-07!5;CL:0000182!4.24e-07!5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.27e-28!22;UBERON:0007499!1.27e-28!22;UBERON:0006925!1.27e-28!22;UBERON:0009497!1.27e-28!22;UBERON:0000015!1.27e-28!22;UBERON:0002423!1.27e-28!22;UBERON:0006235!1.27e-28!22;UBERON:0008835!1.27e-28!22;UBERON:0003894!1.27e-28!22;UBERON:0004161!1.27e-28!22;UBERON:0008836!1.27e-28!22;UBERON:0009854!2.92e-27!23;UBERON:0009856!2.92e-27!23;UBERON:0005172!7.10e-25!49;UBERON:0005173!7.10e-25!49;UBERON:0002417!7.10e-25!49;UBERON:0000916!7.10e-25!49;UBERON:0002365!7.26e-25!25;UBERON:0002330!7.26e-25!25;UBERON:0009569!1.69e-17!66;UBERON:0003914!7.67e-14!47;UBERON:0005256!8.65e-14!47;UBERON:0005177!9.86e-13!85;UBERON:0005057!8.30e-11!51;UBERON:0002100!1.56e-10!98;UBERON:0002368!3.60e-10!60;UBERON:0003929!7.98e-10!55;UBERON:0002530!3.65e-09!65;UBERON:0000949!5.43e-08!72;UBERON:0003104!7.93e-08!131;UBERON:0009142!7.93e-08!131;UBERON:0000490!9.71e-08!66;UBERON:0005911!2.75e-07!69;UBERON:0002405!3.82e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.30e-11,49;UBERON:0005173,6.30e-11,49;UBERON:0002417,6.30e-11,49;UBERON:0000916,6.30e-11,49;UBERON:0003104,9.17e-09,61;UBERON:0009142,9.17e-09,61;UBERON:0002107,2.73e-08,22;UBERON:0007499,2.73e-08,22;UBERON:0006925,2.73e-08,22;UBERON:0009497,2.73e-08,22;UBERON:0000015,2.73e-08,22;UBERON:0002423,2.73e-08,22;UBERON:0006235,2.73e-08,22;UBERON:0008835,2.73e-08,22;UBERON:0003894,2.73e-08,22;UBERON:0004161,2.73e-08,22;UBERON:0008836,2.73e-08,22;UBERON:0009569,4.31e-08,66;UBERON:0009854,6.04e-08,23;UBERON:0009856,6.04e-08,23;UBERON:0002113,8.75e-08,14;UBERON:0003918,8.75e-08,14;UBERON:0011143,8.75e-08,14;UBERON:0005095,8.75e-08,14;UBERON:0007687,8.75e-08,14;UBERON:0002365,2.45e-07,25;UBERON:0002330,2.45e-07,25;UBERON:0005177,9.79e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,2.68816132258401,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,2.06654207171443,2.19798218977925,3.20832626196681,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,2.02063102357689,1.61457672169721,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr2:126371344..126371355,+ | |||
}} |
Revision as of 21:57, 13 September 2013
Short description: | p@chr2:126371344..126371355, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:126371344..126371355, + |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 6.30e-11 | 49 |
abdominal segment element | 6.30e-11 | 49 |
abdominal segment of trunk | 6.30e-11 | 49 |
abdomen | 6.30e-11 | 49 |
mesenchyme | 9.17e-09 | 61 |
entire embryonic mesenchyme | 9.17e-09 | 61 |
liver | 2.73e-08 | 22 |
epithelial sac | 2.73e-08 | 22 |
digestive gland | 2.73e-08 | 22 |
epithelium of foregut-midgut junction | 2.73e-08 | 22 |
anatomical boundary | 2.73e-08 | 22 |
hepatobiliary system | 2.73e-08 | 22 |
foregut-midgut junction | 2.73e-08 | 22 |
hepatic diverticulum | 2.73e-08 | 22 |
liver primordium | 2.73e-08 | 22 |
septum transversum | 2.73e-08 | 22 |
liver bud | 2.73e-08 | 22 |
subdivision of trunk | 4.31e-08 | 66 |
digestive tract diverticulum | 6.04e-08 | 23 |
sac | 6.04e-08 | 23 |
kidney | 8.75e-08 | 14 |
kidney mesenchyme | 8.75e-08 | 14 |
upper urinary tract | 8.75e-08 | 14 |
kidney rudiment | 8.75e-08 | 14 |
kidney field | 8.75e-08 | 14 |
exocrine gland | 2.45e-07 | 25 |
exocrine system | 2.45e-07 | 25 |
trunk region element | 9.79e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.