FFCP PHASE1:Hg19::chr7:150946376..150946389,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6604|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11108|TSSclassifier=N|UniProt=Q6STE5|association_with_transcript=-317bp_to_ENST00000262188_5end|coexpression_cluster_id=C7|description=CAGE_peak_6_at_SMARCD3_5end|id=chr7:150946376..150946389,-|ontology_enrichment_celltype=CL:0002057!1.69e-14!42;CL:0000860!7.03e-13!45;CL:0002194!3.40e-07!63;CL:0000576!3.40e-07!63;CL:0000040!3.40e-07!63;CL:0000559!3.40e-07!63;CL:0000048!8.28e-07!430;CL:0002009!9.92e-07!65|ontology_enrichment_celltype_v019=CL:0000860;1.19e-21;33!CL:0002057;1.19e-21;33!CL:0000473;6.70e-15;39!CL:0000234;6.70e-15;39!CL:0000576;5.29e-11;48|ontology_enrichment_celltype_v019_2=CL:0000860,5.81e-18,42;CL:0002057,5.81e-18,42;CL:0000473,2.59e-15,48;CL:0000234,2.59e-15,48;CL:0002194,1.29e-11,59;CL:0000576,1.29e-11,59;CL:0000040,1.29e-11,59;CL:0000559,1.29e-11,59;CL:0002009,3.87e-11,61;CL:0000839,4.47e-10,66;CL:0000557,6.98e-10,67;CL:0000766,5.37e-09,72;CL:0000134,1.08e-08,354;CL:0002320,2.26e-08,361;CL:0000219,6.47e-08,386|ontology_enrichment_development_v019=CL:0002057;1.69e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.21e-07!167;UBERON:0002384!7.04e-07!375;UBERON:0003688!7.11e-07!6;UBERON:0002358!7.11e-07!6;UBERON:0003684!7.11e-07!6;UBERON:0001178!7.11e-07!6|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.96e-10,82;UBERON:0002371,1.08e-09,76;UBERON:0002384,2.06e-09,371;UBERON:0004765,6.33e-09,90;UBERON:0001434,1.07e-07,100;UBERON:0002405,2.36e-07,93;UBERON:0002390,7.99e-07,98;UBERON:0003061,7.99e-07,98|phase1_expression=1.63510541343501,0,0.140954404095971,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.727752183563449,0.464858073811369,1.23350366406548,0.929119112685311,12.0830804775303,26.3845527724974,16.3172738623124,1.03423704220986,0.645484683583826,0,0.188242339542605,1.63743690034707,0.224723484445085,0.612167784741805,1.92557416245656,3.19668562899521,17.1522676097092,26.528666463677,20.4587880255693,0,0.56738522469114,0,10.5524439407832,18.7733850631273,10.4250645458456,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.144846518960824,0,3.40644409211845,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,1.98613771219828,0.860509862246441,0,0.560677600142307,1.06748995729705,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0,0,1.07633781413317,0.213557388818567,0,0.300091096084402,0.206105058476878,2.83404594050192,0.37223371266318,1.35021065793013,0.487185025805993,1.26216887122057,0.460249493211497,0,1.42003837006646,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0,0.686286847621712,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0.768834895534206,2.04682899626681,0.965123526861645,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.801288320820636,0,0,0.127612712494584,0,0.464845549297286,14.4813679542094,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,1.22864280839693,0,0.422008249231538,0,0,0,1.39473591775749,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |||
|TSSclassifier=N | |||
|UniProt=Q6STE5 | |||
|association_with_transcript=-317bp_to_ENST00000262188_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_SMARCD3_5end | |||
|id=chr7:150946376..150946389,- | |||
|ontology_enrichment_celltype=CL:0002057!1.69e-14!42;CL:0000860!7.03e-13!45;CL:0002194!3.40e-07!63;CL:0000576!3.40e-07!63;CL:0000040!3.40e-07!63;CL:0000559!3.40e-07!63;CL:0000048!8.28e-07!430;CL:0002009!9.92e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-21;33!CL:0002057;1.19e-21;33!CL:0000473;6.70e-15;39!CL:0000234;6.70e-15;39!CL:0000576;5.29e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.81e-18,42;CL:0002057,5.81e-18,42;CL:0000473,2.59e-15,48;CL:0000234,2.59e-15,48;CL:0002194,1.29e-11,59;CL:0000576,1.29e-11,59;CL:0000040,1.29e-11,59;CL:0000559,1.29e-11,59;CL:0002009,3.87e-11,61;CL:0000839,4.47e-10,66;CL:0000557,6.98e-10,67;CL:0000766,5.37e-09,72;CL:0000134,1.08e-08,354;CL:0002320,2.26e-08,361;CL:0000219,6.47e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.21e-07!167;UBERON:0002384!7.04e-07!375;UBERON:0003688!7.11e-07!6;UBERON:0002358!7.11e-07!6;UBERON:0003684!7.11e-07!6;UBERON:0001178!7.11e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.96e-10,82;UBERON:0002371,1.08e-09,76;UBERON:0002384,2.06e-09,371;UBERON:0004765,6.33e-09,90;UBERON:0001434,1.07e-07,100;UBERON:0002405,2.36e-07,93;UBERON:0002390,7.99e-07,98;UBERON:0003061,7.99e-07,98 | |||
|phase1_expression=1.63510541343501,0,0.140954404095971,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.727752183563449,0.464858073811369,1.23350366406548,0.929119112685311,12.0830804775303,26.3845527724974,16.3172738623124,1.03423704220986,0.645484683583826,0,0.188242339542605,1.63743690034707,0.224723484445085,0.612167784741805,1.92557416245656,3.19668562899521,17.1522676097092,26.528666463677,20.4587880255693,0,0.56738522469114,0,10.5524439407832,18.7733850631273,10.4250645458456,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.144846518960824,0,3.40644409211845,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,1.98613771219828,0.860509862246441,0,0.560677600142307,1.06748995729705,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0,0,1.07633781413317,0.213557388818567,0,0.300091096084402,0.206105058476878,2.83404594050192,0.37223371266318,1.35021065793013,0.487185025805993,1.26216887122057,0.460249493211497,0,1.42003837006646,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0,0.686286847621712,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0.768834895534206,2.04682899626681,0.965123526861645,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.801288320820636,0,0,0.127612712494584,0,0.464845549297286,14.4813679542094,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,1.22864280839693,0,0.422008249231538,0,0,0,1.39473591775749,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,1.13641803165053,0,0,0.457680136793847,0.604923695052956,0.15543720058278,0,0,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0.727394636810238,0.322231671127465,1.39210127963548,0,1.20008329398946,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.636008701306837,0,0,2.46873160583479,0.6124909547064,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0,0,1.03343398250592,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,0.156986185701028,0,0,0,0,1.9110067515482,0.0714765441766563,0,0,1.04314963381548,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.94228651156368,0.718639647993729,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.206865991723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| |||
|short_description=p6@SMARCD3 | |||
}} |
Revision as of 00:01, 14 September 2013
Short description: | p6@SMARCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SMARCD3_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -317bp_to_ENST00000262188_5end |
EntrezGene: | SMARCD3 |
HGNC: | 11108 |
UniProt: | Q6STE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.81e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-18 | 42 |
defensive cell | 2.59e-15 | 48 |
phagocyte | 2.59e-15 | 48 |
monopoietic cell | 1.29e-11 | 59 |
monocyte | 1.29e-11 | 59 |
monoblast | 1.29e-11 | 59 |
promonocyte | 1.29e-11 | 59 |
macrophage dendritic cell progenitor | 3.87e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.47e-10 | 66 |
granulocyte monocyte progenitor cell | 6.98e-10 | 67 |
myeloid leukocyte | 5.37e-09 | 72 |
mesenchymal cell | 1.08e-08 | 354 |
connective tissue cell | 2.26e-08 | 361 |
motile cell | 6.47e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.96e-10 | 82 |
bone marrow | 1.08e-09 | 76 |
connective tissue | 2.06e-09 | 371 |
skeletal element | 6.33e-09 | 90 |
skeletal system | 1.07e-07 | 100 |
immune system | 2.36e-07 | 93 |
hematopoietic system | 7.99e-07 | 98 |
blood island | 7.99e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.