FFCP PHASE1:Mm9::chr2:84355708..84355747,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:84355708..84355747,+|id=chr2:84355708..84355747,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.30e-07,3;CL:0002202,4.30e-07,3;CL:0000069,4.30e-07,3;CL:0002632,4.30e-07,3;CL:0002368,4.30e-07,3;CL:0000307,4.30e-07,3;CL:0000377,4.30e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.31e-18!17;UBERON:0005181!1.31e-18!17;UBERON:0002224!1.31e-18!17;UBERON:0000915!1.31e-18!17;UBERON:0008947!1.31e-18!17;UBERON:0003258!1.31e-18!17;UBERON:0002048!1.84e-17!14;UBERON:0000117!1.84e-17!14;UBERON:0000171!1.84e-17!14;UBERON:0000170!1.84e-17!14;UBERON:0005597!1.84e-17!14;UBERON:0000118!1.84e-17!14;UBERON:0001007!1.74e-15!128;UBERON:0001555!1.74e-15!128;UBERON:0007026!1.74e-15!128;UBERON:0004119!4.92e-15!130;UBERON:0000925!4.92e-15!130;UBERON:0006595!4.92e-15!130;UBERON:0004921!5.71e-15!126;UBERON:0004185!5.71e-15!126;UBERON:0005409!5.14e-14!59;UBERON:0005153!1.19e-13!17;UBERON:0000160!3.36e-10!43;UBERON:0000344!4.63e-08!15;UBERON:0001242!7.75e-08!13;UBERON:0000060!7.75e-08!13;UBERON:0001262!7.75e-08!13;UBERON:0004786!7.75e-08!13;UBERON:0000310!8.04e-08!6;UBERON:0001443!8.04e-08!6;UBERON:0005157!3.57e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.04e-13,17;UBERON:0005181,4.04e-13,17;UBERON:0002224,4.04e-13,17;UBERON:0000915,4.04e-13,17;UBERON:0008947,4.04e-13,17;UBERON:0003258,4.04e-13,17;UBERON:0002108,2.26e-12,4;UBERON:0004921,8.20e-12,114;UBERON:0001007,1.44e-11,116;UBERON:0001555,1.44e-11,116;UBERON:0007026,1.44e-11,116;UBERON:0005409,1.76e-11,47;UBERON:0004119,2.49e-11,118;UBERON:0000925,2.49e-11,118;UBERON:0006595,2.49e-11,118;UBERON:0002048,1.48e-08,14;UBERON:0000117,1.48e-08,14;UBERON:0000171,1.48e-08,14;UBERON:0000170,1.48e-08,14;UBERON:0005597,1.48e-08,14;UBERON:0000118,1.48e-08,14;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3;UBERON:0000160,2.58e-07,31;UBERON:0003126,4.30e-07,3;UBERON:0001005,4.30e-07,3;UBERON:0007196,4.30e-07,3;UBERON:0001558,4.30e-07,3;UBERON:0005153,5.11e-07,17|phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,7.41091335879858,5.29263272495855,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01343946190039,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,1.79763881730844,0.864552199498777,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,1.64283173801951,1.00503754465089,0.714130922658041,1.75620283072019,1.26108115284953,1.55025282754142,0.478364305972461,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.756037385752609,1.04544148007234,0.218362563746178,2.29269388854195,2.47960367176008,0.26175594198403,2.72191443912765,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr2:84355708..84355747,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:84355708..84355747,+ | |||
|id=chr2:84355708..84355747,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.30e-07,3;CL:0002202,4.30e-07,3;CL:0000069,4.30e-07,3;CL:0002632,4.30e-07,3;CL:0002368,4.30e-07,3;CL:0000307,4.30e-07,3;CL:0000377,4.30e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.31e-18!17;UBERON:0005181!1.31e-18!17;UBERON:0002224!1.31e-18!17;UBERON:0000915!1.31e-18!17;UBERON:0008947!1.31e-18!17;UBERON:0003258!1.31e-18!17;UBERON:0002048!1.84e-17!14;UBERON:0000117!1.84e-17!14;UBERON:0000171!1.84e-17!14;UBERON:0000170!1.84e-17!14;UBERON:0005597!1.84e-17!14;UBERON:0000118!1.84e-17!14;UBERON:0001007!1.74e-15!128;UBERON:0001555!1.74e-15!128;UBERON:0007026!1.74e-15!128;UBERON:0004119!4.92e-15!130;UBERON:0000925!4.92e-15!130;UBERON:0006595!4.92e-15!130;UBERON:0004921!5.71e-15!126;UBERON:0004185!5.71e-15!126;UBERON:0005409!5.14e-14!59;UBERON:0005153!1.19e-13!17;UBERON:0000160!3.36e-10!43;UBERON:0000344!4.63e-08!15;UBERON:0001242!7.75e-08!13;UBERON:0000060!7.75e-08!13;UBERON:0001262!7.75e-08!13;UBERON:0004786!7.75e-08!13;UBERON:0000310!8.04e-08!6;UBERON:0001443!8.04e-08!6;UBERON:0005157!3.57e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.04e-13,17;UBERON:0005181,4.04e-13,17;UBERON:0002224,4.04e-13,17;UBERON:0000915,4.04e-13,17;UBERON:0008947,4.04e-13,17;UBERON:0003258,4.04e-13,17;UBERON:0002108,2.26e-12,4;UBERON:0004921,8.20e-12,114;UBERON:0001007,1.44e-11,116;UBERON:0001555,1.44e-11,116;UBERON:0007026,1.44e-11,116;UBERON:0005409,1.76e-11,47;UBERON:0004119,2.49e-11,118;UBERON:0000925,2.49e-11,118;UBERON:0006595,2.49e-11,118;UBERON:0002048,1.48e-08,14;UBERON:0000117,1.48e-08,14;UBERON:0000171,1.48e-08,14;UBERON:0000170,1.48e-08,14;UBERON:0005597,1.48e-08,14;UBERON:0000118,1.48e-08,14;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3;UBERON:0000160,2.58e-07,31;UBERON:0003126,4.30e-07,3;UBERON:0001005,4.30e-07,3;UBERON:0007196,4.30e-07,3;UBERON:0001558,4.30e-07,3;UBERON:0005153,5.11e-07,17 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,7.41091335879858,5.29263272495855,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01343946190039,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,1.79763881730844,0.864552199498777,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,1.64283173801951,1.00503754465089,0.714130922658041,1.75620283072019,1.26108115284953,1.55025282754142,0.478364305972461,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.756037385752609,1.04544148007234,0.218362563746178,2.29269388854195,2.47960367176008,0.26175594198403,2.72191443912765,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:84355708..84355747,+ | |||
}} |
Revision as of 00:46, 14 September 2013
Short description: | p@chr2:84355708..84355747, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:84355708..84355747, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.30e-07 | 3 |
epithelial cell of tracheobronchial tree | 4.30e-07 | 3 |
branched duct epithelial cell | 4.30e-07 | 3 |
epithelial cell of lower respiratory tract | 4.30e-07 | 3 |
respiratory epithelial cell | 4.30e-07 | 3 |
tracheal epithelial cell | 4.30e-07 | 3 |
tracheoblast | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 4.04e-13 | 17 |
thoracic segment organ | 4.04e-13 | 17 |
thoracic cavity | 4.04e-13 | 17 |
thoracic segment of trunk | 4.04e-13 | 17 |
respiratory primordium | 4.04e-13 | 17 |
endoderm of foregut | 4.04e-13 | 17 |
small intestine | 2.26e-12 | 4 |
subdivision of digestive tract | 8.20e-12 | 114 |
digestive system | 1.44e-11 | 116 |
digestive tract | 1.44e-11 | 116 |
primitive gut | 1.44e-11 | 116 |
gastrointestinal system | 1.76e-11 | 47 |
endoderm-derived structure | 2.49e-11 | 118 |
endoderm | 2.49e-11 | 118 |
presumptive endoderm | 2.49e-11 | 118 |
lung | 1.48e-08 | 14 |
respiratory tube | 1.48e-08 | 14 |
respiration organ | 1.48e-08 | 14 |
pair of lungs | 1.48e-08 | 14 |
lung primordium | 1.48e-08 | 14 |
lung bud | 1.48e-08 | 14 |
ileal mucosa | 4.50e-08 | 3 |
ileum | 4.50e-08 | 3 |
mucosa of small intestine | 4.50e-08 | 3 |
wall of small intestine | 4.50e-08 | 3 |
intestine | 2.58e-07 | 31 |
trachea | 4.30e-07 | 3 |
respiratory airway | 4.30e-07 | 3 |
tracheobronchial tree | 4.30e-07 | 3 |
lower respiratory tract | 4.30e-07 | 3 |
epithelial bud | 5.11e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.