FFCP PHASE1:Mm9::chr3:33980178..33980269,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503724,67713|HGNC=|MCL_coexpression_id=201|UniProt=G3X8S1,Q9CQV7,D3Z5K6|association_with_transcript=0bp_to_ENSMUST00000011029,ENSMUST00000108195,ENSMUST00000117223,ENSMUST00000120805,NM_001026211,NM_026332,uc008oxm.1,uc008oxo.1,uc008oxp.1_5end|description=CAGE_peak_1_at_Dnajc19_5end,CAGE_peak_1_at_Gm15118_5end|id=chr3:33980178..33980269,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.03e-10!43;UBERON:0002107!1.24e-09!22;UBERON:0007499!1.24e-09!22;UBERON:0006925!1.24e-09!22;UBERON:0009497!1.24e-09!22;UBERON:0000015!1.24e-09!22;UBERON:0002423!1.24e-09!22;UBERON:0006235!1.24e-09!22;UBERON:0008835!1.24e-09!22;UBERON:0003894!1.24e-09!22;UBERON:0004161!1.24e-09!22;UBERON:0008836!1.24e-09!22;UBERON:0002365!2.43e-09!25;UBERON:0002330!2.43e-09!25;UBERON:0003914!2.45e-09!47;UBERON:0009854!2.67e-09!23;UBERON:0009856!2.67e-09!23;UBERON:0005409!4.79e-09!59;UBERON:0005172!3.26e-08!49;UBERON:0005173!3.26e-08!49;UBERON:0002417!3.26e-08!49;UBERON:0000916!3.26e-08!49;UBERON:0002108!3.10e-07!16;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!8.23e-07!130;UBERON:0000925!8.23e-07!130;UBERON:0006595!8.23e-07!130;UBERON:0004921!8.90e-07!126;UBERON:0004185!8.90e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.24e-09,22;UBERON:0007499,1.24e-09,22;UBERON:0006925,1.24e-09,22;UBERON:0009497,1.24e-09,22;UBERON:0000015,1.24e-09,22;UBERON:0002423,1.24e-09,22;UBERON:0006235,1.24e-09,22;UBERON:0008835,1.24e-09,22;UBERON:0003894,1.24e-09,22;UBERON:0004161,1.24e-09,22;UBERON:0008836,1.24e-09,22;UBERON:0002365,2.43e-09,25;UBERON:0002330,2.43e-09,25;UBERON:0003914,2.45e-09,47;UBERON:0009854,2.67e-09,23;UBERON:0009856,2.67e-09,23;UBERON:0005172,3.26e-08,49;UBERON:0005173,3.26e-08,49;UBERON:0002417,3.26e-08,49;UBERON:0000916,3.26e-08,49;UBERON:0005177,1.82e-07,79|phase1_expression=47.5642075901238,77.4725404959382,80.5348653719479,91.9491202372763,78.1397338716302,83.6038774121211,88.5391907857042,63.9160451035803,22.1038293778117,31.1305820008251,115.058474647539,110.643984526532,62.1458649650277,62.7678489368401,128.24725829903,119.662883027387,111.230338622375,81.5469697451044,71.5737343421956,72.1462408056651,78.1547836488331,75.7589957662755,89.069128096377,116.314491370807,119.292826154928,106.232913361279,126.644026870768,118.940120442611,161.709929957374,135.340179681083,168.736918608687,48.8973618563916,27.0628506537211,95.0890086092632,149.913990650912,185.351629574719,165.785517285044,52.7349854728504,136.733685291665,99.4695113550217,51.7643709467293,50.545365886925,64.0873666001123,64.9627580753979,69.747328679026,68.0958450519839,162.737399624392,81.3233833299065,77.768908688003,58.5233996213593,82.5919887589639,110.689474561028,57.2138686656881,59.4796956449302,49.4057884739422,51.9664060792613,64.1834905462815,62.3963231655705,43.7003555456731,37.5583595283143,52.6080064910129,75.2234861193473,50.6898033783349,90.4399215867806,86.0313735433268,96.6252956326696,85.6856316082637,103.73894243682,33.8028136125637,39.5567399311854,40.3823925794653,51.9884791614923,83.4883084797099,44.4641601150283,38.7215702913675,68.9414089957516,67.1706874096271,61.6729842951457,59.4457283701662,37.1919331399147,34.5823292817108,39.5894161623138,53.6031358082651,75.4101897442451,57.910535907411,44.1942878210502,73.8909023347344,37.0934897192348,35.7427632532629,65.898400413117,55.6539818307221,243.499957185732,125.114725402226,156.513925574967,324.888208723835,312.72276719394,175.134191904295,106.518951611286,123.658138190966,124.72886980215,70.8442401476703,64.1632387071589,53.5091003383956,49.7746692207332,124.698839622459,114.011939463794,101.104889002957,206.216086772622,63.9576572608514,72.7366481417641,78.0683970447611,72.1583183599775,75.8724985972433,69.1816920136538,60.7933615891594,95.0039430452347,54.6300878692966,164.554068174859,73.4226758118396,109.030856864554,108.654027082514,108.127181449155,82.0123749359738,70.5601720797829,63.4623521644769,136.669524536596,120.054754754932,211.765664040673,129.484561387453,74.8953197024114,87.8401157411763,83.9371072113934,78.568592726909,73.3903362538049,75.6348482196799,80.4716664816078,69.3526067820654,80.24249604351,114.483409570455,96.5928118518916,68.8337143272703,83.4544639093507,75.265970258636,71.8861981076361,68.8529371411438,77.636914492619,70.2762934197966,85.3721123438752,70.2751656961066,54.4625510883319,59.4714799674147,64.8819367985622,67.0093870633691,49.8000598126698,59.4710374218957,75.8320556578459,207.152890257404,161.357137760926,117.075361750984,74.3581523402452,85.6020118931001,99.0341338035582,80.4932100989715,103.497985899134,109.529650150039,125.56833016522,132.795333692812,118.283291817943,170.648564360279,198.642631535705,201.618129340543,218.276581226021,217.35461413814,195.538752133862,68.7648131804696,72.7535609521541,165.870229057867,163.165999631407,79.343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| ||
|EntrezGene=100503724,67713 | |||
|HGNC= | |||
|MCL_coexpression_id=201 | |||
|UniProt=G3X8S1,Q9CQV7,D3Z5K6 | |||
|association_with_transcript=0bp_to_ENSMUST00000011029,ENSMUST00000108195,ENSMUST00000117223,ENSMUST00000120805,NM_001026211,NM_026332,uc008oxm.1,uc008oxo.1,uc008oxp.1_5end | |||
|description=CAGE_peak_1_at_Dnajc19_5end,CAGE_peak_1_at_Gm15118_5end | |||
|id=chr3:33980178..33980269,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.03e-10!43;UBERON:0002107!1.24e-09!22;UBERON:0007499!1.24e-09!22;UBERON:0006925!1.24e-09!22;UBERON:0009497!1.24e-09!22;UBERON:0000015!1.24e-09!22;UBERON:0002423!1.24e-09!22;UBERON:0006235!1.24e-09!22;UBERON:0008835!1.24e-09!22;UBERON:0003894!1.24e-09!22;UBERON:0004161!1.24e-09!22;UBERON:0008836!1.24e-09!22;UBERON:0002365!2.43e-09!25;UBERON:0002330!2.43e-09!25;UBERON:0003914!2.45e-09!47;UBERON:0009854!2.67e-09!23;UBERON:0009856!2.67e-09!23;UBERON:0005409!4.79e-09!59;UBERON:0005172!3.26e-08!49;UBERON:0005173!3.26e-08!49;UBERON:0002417!3.26e-08!49;UBERON:0000916!3.26e-08!49;UBERON:0002108!3.10e-07!16;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!8.23e-07!130;UBERON:0000925!8.23e-07!130;UBERON:0006595!8.23e-07!130;UBERON:0004921!8.90e-07!126;UBERON:0004185!8.90e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.24e-09,22;UBERON:0007499,1.24e-09,22;UBERON:0006925,1.24e-09,22;UBERON:0009497,1.24e-09,22;UBERON:0000015,1.24e-09,22;UBERON:0002423,1.24e-09,22;UBERON:0006235,1.24e-09,22;UBERON:0008835,1.24e-09,22;UBERON:0003894,1.24e-09,22;UBERON:0004161,1.24e-09,22;UBERON:0008836,1.24e-09,22;UBERON:0002365,2.43e-09,25;UBERON:0002330,2.43e-09,25;UBERON:0003914,2.45e-09,47;UBERON:0009854,2.67e-09,23;UBERON:0009856,2.67e-09,23;UBERON:0005172,3.26e-08,49;UBERON:0005173,3.26e-08,49;UBERON:0002417,3.26e-08,49;UBERON:0000916,3.26e-08,49;UBERON:0005177,1.82e-07,79 | |||
|phase1_expression=47.5642075901238,77.4725404959382,80.5348653719479,91.9491202372763,78.1397338716302,83.6038774121211,88.5391907857042,63.9160451035803,22.1038293778117,31.1305820008251,115.058474647539,110.643984526532,62.1458649650277,62.7678489368401,128.24725829903,119.662883027387,111.230338622375,81.5469697451044,71.5737343421956,72.1462408056651,78.1547836488331,75.7589957662755,89.069128096377,116.314491370807,119.292826154928,106.232913361279,126.644026870768,118.940120442611,161.709929957374,135.340179681083,168.736918608687,48.8973618563916,27.0628506537211,95.0890086092632,149.913990650912,185.351629574719,165.785517285044,52.7349854728504,136.733685291665,99.4695113550217,51.7643709467293,50.545365886925,64.0873666001123,64.9627580753979,69.747328679026,68.0958450519839,162.737399624392,81.3233833299065,77.768908688003,58.5233996213593,82.5919887589639,110.689474561028,57.2138686656881,59.4796956449302,49.4057884739422,51.9664060792613,64.1834905462815,62.3963231655705,43.7003555456731,37.5583595283143,52.6080064910129,75.2234861193473,50.6898033783349,90.4399215867806,86.0313735433268,96.6252956326696,85.6856316082637,103.73894243682,33.8028136125637,39.5567399311854,40.3823925794653,51.9884791614923,83.4883084797099,44.4641601150283,38.7215702913675,68.9414089957516,67.1706874096271,61.6729842951457,59.4457283701662,37.1919331399147,34.5823292817108,39.5894161623138,53.6031358082651,75.4101897442451,57.910535907411,44.1942878210502,73.8909023347344,37.0934897192348,35.7427632532629,65.898400413117,55.6539818307221,243.499957185732,125.114725402226,156.513925574967,324.888208723835,312.72276719394,175.134191904295,106.518951611286,123.658138190966,124.72886980215,70.8442401476703,64.1632387071589,53.5091003383956,49.7746692207332,124.698839622459,114.011939463794,101.104889002957,206.216086772622,63.9576572608514,72.7366481417641,78.0683970447611,72.1583183599775,75.8724985972433,69.1816920136538,60.7933615891594,95.0039430452347,54.6300878692966,164.554068174859,73.4226758118396,109.030856864554,108.654027082514,108.127181449155,82.0123749359738,70.5601720797829,63.4623521644769,136.669524536596,120.054754754932,211.765664040673,129.484561387453,74.8953197024114,87.8401157411763,83.9371072113934,78.568592726909,73.3903362538049,75.6348482196799,80.4716664816078,69.3526067820654,80.24249604351,114.483409570455,96.5928118518916,68.8337143272703,83.4544639093507,75.265970258636,71.8861981076361,68.8529371411438,77.636914492619,70.2762934197966,85.3721123438752,70.2751656961066,54.4625510883319,59.4714799674147,64.8819367985622,67.0093870633691,49.8000598126698,59.4710374218957,75.8320556578459,207.152890257404,161.357137760926,117.075361750984,74.3581523402452,85.6020118931001,99.0341338035582,80.4932100989715,103.497985899134,109.529650150039,125.56833016522,132.795333692812,118.283291817943,170.648564360279,198.642631535705,201.618129340543,218.276581226021,217.35461413814,195.538752133862,68.7648131804696,72.7535609521541,165.870229057867,163.165999631407,79.343229199107,70.1354749018524,69.072959268642,96.6064082945811,123.419814333903,142.478993958307,125.750201309296,141.476402107925,161.859874467374,133.897705683695,132.575579241002,153.698118879872,131.628072373689,117.891633766585,82.5055369145905,84.8866448690285,85.6578791115411,103.047571889729,122.965876864275,113.479756582535,147.151421888147,179.641550091176,219.170224066559,218.906568797274,232.715312263412,97.604386843915,126.190874862676,107.259227607575,136.727721815851,126.859186029771,146.919116477879,136.080273014233,125.168395070327,236.671938168126,106.388472830242,207.654648799025,252.43847754968,246.769563754328,280.756952161793,226.266011519419,75.9335611584745,77.3124960023578,59.9711113306655,76.8945238561602,76.0396404454747,46.399233311383,48.0848154589748,51.3201493866011,70.7781797036798,63.7818306188472,58.6793548659553,70.2973620130516,67.3471429276993,58.0042724911861,93.4905960423488,113.67628791811,93.4352118736169,70.3638703077068,82.0413514837617,81.344910494989,122.459404196377,214.600288123717,61.5241027861701,59.7371278773857,43.3001029442926,65.7164194369518,58.818849957752,49.8214694188345,57.483119637835,43.8383786866968,49.0156844653689,68.4414403978449,60.1825961283059,68.0210606008915,67.9238620504412,62.1937363606459,169.913777075152,83.7593194734686,113.975980975711,168.235731142261,120.778474188236,140.497862610375,106.214028492139,141.051087037272,156.858846489277,189.306018003554,229.812566693497,188.738044144182,61.6195686414356,78.5066369976513,83.9537857750077,64.7297845795409,59.9409989710885,55.1159646390398,63.0222748906123,36.8402588428665,68.2894670465397,69.0572551016054,108.499971843041,74.528586329549,50.3769011291225,67.4298500696783,71.2652893698725,59.0907239082221,128.543048953764,83.4413859047294,86.4606656837135,73.8864987308337,84.819093535328,107.370020492674,88.8512480186664,87.6220403380982,71.0509837374315,68.9960659955634,68.823586954603,151.792628264403,55.991470863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| |||
|short_description=p1@Dnajc19,p1@Gm15118 | |||
}} |
Revision as of 02:08, 14 September 2013
Short description: | p1@Dnajc19, p1@Gm15118 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajc19_5end, CAGE_peak_1_at_Gm15118_5end |
Coexpression cluster: | MCL_coexpression_mm9:201 |
Association with transcript: | 0bp_to_ENSMUST00000011029, ENSMUST00000108195, ENSMUST00000117223, ENSMUST00000120805, NM_001026211, NM_026332, uc008oxm.1, uc008oxo.1, uc008oxp.1_5end |
EntrezGene: | 100503724,67713 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.24e-09 | 22 |
epithelial sac | 1.24e-09 | 22 |
digestive gland | 1.24e-09 | 22 |
epithelium of foregut-midgut junction | 1.24e-09 | 22 |
anatomical boundary | 1.24e-09 | 22 |
hepatobiliary system | 1.24e-09 | 22 |
foregut-midgut junction | 1.24e-09 | 22 |
hepatic diverticulum | 1.24e-09 | 22 |
liver primordium | 1.24e-09 | 22 |
septum transversum | 1.24e-09 | 22 |
liver bud | 1.24e-09 | 22 |
exocrine gland | 2.43e-09 | 25 |
exocrine system | 2.43e-09 | 25 |
epithelial tube | 2.45e-09 | 47 |
digestive tract diverticulum | 2.67e-09 | 23 |
sac | 2.67e-09 | 23 |
abdomen element | 3.26e-08 | 49 |
abdominal segment element | 3.26e-08 | 49 |
abdominal segment of trunk | 3.26e-08 | 49 |
abdomen | 3.26e-08 | 49 |
trunk region element | 1.82e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.