FFCP PHASE1:Hg19::chr7:84122019..84122030,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10371|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10723|TSSclassifier=S|UniProt=C9JD25|association_with_transcript=9bp_to_ENST00000424555_5end|description=CAGE_peak_18_at_SEMA3A_5end|id=chr7:84122019..84122030,-|ontology_enrichment_celltype=CL:0002620!6.36e-32!23;CL:0000057!3.32e-18!75;CL:0002541!5.18e-08!3;CL:0002537!5.26e-08!5;CL:0000055!2.82e-07!180|ontology_enrichment_celltype_v019=CL:0002620;1.78e-37;23!CL:0000319;1.37e-08;1|ontology_enrichment_celltype_v019_2=CL:0002620,1.37e-37,23;CL:0000057,5.28e-12,76;CL:0000319,1.42e-08,1|ontology_enrichment_development_v019=UBERON:0003124;1.37e-08;1|ontology_enrichment_disease=DOID:17!5.85e-13!5;DOID:450!5.85e-13!5;DOID:66!5.85e-13!5;DOID:423!5.85e-13!5;DOID:0080000!5.85e-13!5;DOID:11722!5.85e-13!5|ontology_enrichment_disease_v019=DOID:17;1.16e-23;5!DOID:450;1.16e-23;5!DOID:66;1.16e-23;5!DOID:423;1.16e-23;5!DOID:0080000;1.16e-23;5!DOID:11722;1.16e-23;5!DOID:3030;1.37e-08;1|ontology_enrichment_disease_v019_2=DOID:17,1.03e-23,5;DOID:450,1.03e-23,5;DOID:66,1.03e-23,5;DOID:423,1.03e-23,5;DOID:0080000,1.03e-23,5;DOID:11722,1.03e-23,5;DOID:3030,1.42e-08,1|ontology_enrichment_uberon=UBERON:0002199!2.58e-21!45;UBERON:0002416!2.58e-21!45;UBERON:0002097!2.73e-20!40;UBERON:0003102!1.14e-11!95;UBERON:0005631!5.41e-10!14;UBERON:0000158!5.41e-10!14;UBERON:0000476!5.18e-08!3;UBERON:0000920!5.18e-08!3;UBERON:0002384!5.89e-08!375|ontology_enrichment_uberon_v019=UBERON:0002097;3.77e-14;41!UBERON:0002199;5.44e-12;46!UBERON:0002416;5.44e-12;46!UBERON:0003102;3.39e-08;50|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.87e-20,41;UBERON:0002199,7.37e-18,46;UBERON:0002416,7.37e-18,46;UBERON:0003102,2.77e-07,99|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,2.31754430337318,0,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.647491777472526,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0,0.505008341862199,0,0.277064115484183,0,0,0,0,0.179389635688862,1.06778694409284,1.90738711043606,1.20036438433761,2.67936576019941,3.09168648054755,2.23340227597908,2.53164498361899,0.68205903612839,4.54380793639406,3.49789614840738,2.7479829659198,0.355009592516614,1.71278566986988,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,3.39809460898638,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21879476821022,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7548292581589,0.612691153526923,1.63936315354902,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,1.1531308121143,0,0,0,0,0,0,0,0,4.20408244970683,0,0,0,0.0714765441766563,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52434499509095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0|short_description=p18@SEMA3A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |||
|TSSclassifier=S | |||
|UniProt=C9JD25 | |||
|association_with_transcript=9bp_to_ENST00000424555_5end | |||
|description=CAGE_peak_18_at_SEMA3A_5end | |||
|id=chr7:84122019..84122030,- | |||
|ontology_enrichment_celltype=CL:0002620!6.36e-32!23;CL:0000057!3.32e-18!75;CL:0002541!5.18e-08!3;CL:0002537!5.26e-08!5;CL:0000055!2.82e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.78e-37;23!CL:0000319;1.37e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.37e-37,23;CL:0000057,5.28e-12,76;CL:0000319,1.42e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.37e-08;1 | |||
|ontology_enrichment_disease=DOID:17!5.85e-13!5;DOID:450!5.85e-13!5;DOID:66!5.85e-13!5;DOID:423!5.85e-13!5;DOID:0080000!5.85e-13!5;DOID:11722!5.85e-13!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.16e-23;5!DOID:450;1.16e-23;5!DOID:66;1.16e-23;5!DOID:423;1.16e-23;5!DOID:0080000;1.16e-23;5!DOID:11722;1.16e-23;5!DOID:3030;1.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.03e-23,5;DOID:450,1.03e-23,5;DOID:66,1.03e-23,5;DOID:423,1.03e-23,5;DOID:0080000,1.03e-23,5;DOID:11722,1.03e-23,5;DOID:3030,1.42e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.58e-21!45;UBERON:0002416!2.58e-21!45;UBERON:0002097!2.73e-20!40;UBERON:0003102!1.14e-11!95;UBERON:0005631!5.41e-10!14;UBERON:0000158!5.41e-10!14;UBERON:0000476!5.18e-08!3;UBERON:0000920!5.18e-08!3;UBERON:0002384!5.89e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.77e-14;41!UBERON:0002199;5.44e-12;46!UBERON:0002416;5.44e-12;46!UBERON:0003102;3.39e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.87e-20,41;UBERON:0002199,7.37e-18,46;UBERON:0002416,7.37e-18,46;UBERON:0003102,2.77e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,2.31754430337318,0,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.647491777472526,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0,0.505008341862199,0,0.277064115484183,0,0,0,0,0.179389635688862,1.06778694409284,1.90738711043606,1.20036438433761,2.67936576019941,3.09168648054755,2.23340227597908,2.53164498361899,0.68205903612839,4.54380793639406,3.49789614840738,2.7479829659198,0.355009592516614,1.71278566986988,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,3.39809460898638,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21879476821022,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7548292581589,0.612691153526923,1.63936315354902,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,1.1531308121143,0,0,0,0,0,0,0,0,4.20408244970683,0,0,0,0.0714765441766563,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52434499509095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p18@SEMA3A | |||
}} |
Revision as of 02:14, 14 September 2013
Short description: | p18@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.37e-37 | 23 |
fibroblast | 5.28e-12 | 76 |
mucus secreting cell | 1.42e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.87e-20 | 41 |
integument | 7.37e-18 | 46 |
integumental system | 7.37e-18 | 46 |
surface structure | 2.77e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.03e-23 | 5 |
myotonic disease | 1.03e-23 | 5 |
muscle tissue disease | 1.03e-23 | 5 |
myopathy | 1.03e-23 | 5 |
muscular disease | 1.03e-23 | 5 |
myotonic dystrophy | 1.03e-23 | 5 |
mucinous adenocarcinoma | 1.42e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.