FFCP PHASE1:Hg19::chr8:41167120..41167134,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6422|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10776|TSSclassifier=S|UniProt=Q8N474|association_with_transcript=-104bp_to_ENST00000220772_5end|coexpression_cluster_id=C863|description=CAGE_peak_3_at_SFRP1_5end|id=chr8:41167120..41167134,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;7.17e-14;3!CL:0000067;7.17e-14;3!CL:0005012;7.17e-14;3!CL:0002304;7.17e-14;3|ontology_enrichment_celltype_v019_2=CL:0000064,7.21e-14,3;CL:0000067,7.21e-14,3;CL:0005012,7.21e-14,3;CL:0002304,7.21e-14,3;CL:0000047,2.27e-08,8;CL:0000540,7.75e-07,6;CL:0000031,7.75e-07,6;CL:0000404,7.75e-07,6|ontology_enrichment_development_v019=UBERON:0005795;2.64e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.86e-13;3!DOID:127;2.86e-13;3!DOID:0060072;4.60e-10;4|ontology_enrichment_disease_v019_2=DOID:0060084,3.53e-13,3;DOID:127,3.53e-13,3;DOID:0060072,5.38e-10,4|ontology_enrichment_uberon=UBERON:0007625!4.85e-10!11;UBERON:0004121!3.39e-09!169;UBERON:0000468!1.24e-08!659;UBERON:0000924!1.27e-08!173;UBERON:0006601!1.27e-08!173;UBERON:0003075!6.91e-08!86;UBERON:0007284!6.91e-08!86;UBERON:0000475!1.56e-07!365;UBERON:0002346!4.05e-07!90;UBERON:0000019!7.55e-07!19;UBERON:0000047!7.55e-07!19;UBERON:0004088!7.55e-07!19;UBERON:0003072!7.55e-07!19;UBERON:0003071!7.55e-07!19;UBERON:0004128!7.55e-07!19|ontology_enrichment_uberon_v019=UBERON:0000488;9.41e-18;4!UBERON:0001778;7.17e-14;3!UBERON:0001775;7.17e-14;3!UBERON:0002203;7.44e-12;6!UBERON:0001768;7.44e-12;6!UBERON:0002200;7.44e-12;6!UBERON:0007625;1.01e-09;11!UBERON:0004175;1.36e-08;21!UBERON:0003975;1.23e-07;18!UBERON:0001801;1.47e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.05e-17,4;UBERON:0001778,7.21e-14,3;UBERON:0001775,7.21e-14,3;UBERON:0002203,8.01e-12,6;UBERON:0001768,8.01e-12,6;UBERON:0002200,8.01e-12,6;UBERON:0007625,1.04e-09,11;UBERON:0004175,2.76e-09,25;UBERON:0005795,1.80e-08,22;UBERON:0003975,2.79e-08,22;UBERON:0001801,1.51e-07,14|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,1.22866968250754,0.697801167972428,0.655324116390517,1.84636884759917,0,0,0,0,0,0,0.369363174230364,2.24400760368678,1.56727360739044,0.572471974262113,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8168521455085,4.21285855178871,4.21606971327005,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,1.10550885580591,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.901428353439581,0,0,0,1.27159140695737,0,0.206105058476878,0,0,0.337552664482532,0.389748020644795,0,0.552299391853796,0,0,0,0.339121184620975,0,0,0,0.731842236777572,5.56625026950238,0.69716365721711,0.310983165046111,1.51392510525377,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25978839567199,0,0,0,0,0,0,5.77325368101093,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0,0,0.955719759148911,0,0,0,0,0,0.303127571446259,8.32177197552485,0.30239029332968,0.248107807818777,0.61384789315225,0.561320188866147,0.640695746278505,0,0.321707842287215,0,0,0,0.164254312027618,1.55776328755086,0,0,0,0.184161977871793,0.114814448164607,0.910455840033585,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,6.42735719376638,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,4.09256050879832,0.6970372701606,0.308033580176089,0,0.869932992075073,0.74129687641568,0.143124886741991,0,0,0,0.255897791311334,0,2.54562598340749,0,0.359744915166629,0,0,0,0,0,0.975267478179181,0.731140468893853,0,0,0.141405431953713,3.39024349860728,6.06501877900737,0.66343897524122,1.31535265576129,0,1.31178950409327,0,0,0,0,0,0,0,0.211107635297664,0,0.75894634753143,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,3.38581137416707,0,0,0.0897576444097721,0,1.5950057986596,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10776 | |||
|TSSclassifier=S | |||
|UniProt=Q8N474 | |||
|association_with_transcript=-104bp_to_ENST00000220772_5end | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_3_at_SFRP1_5end | |||
|id=chr8:41167120..41167134,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;7.17e-14;3!CL:0000067;7.17e-14;3!CL:0005012;7.17e-14;3!CL:0002304;7.17e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.21e-14,3;CL:0000067,7.21e-14,3;CL:0005012,7.21e-14,3;CL:0002304,7.21e-14,3;CL:0000047,2.27e-08,8;CL:0000540,7.75e-07,6;CL:0000031,7.75e-07,6;CL:0000404,7.75e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.64e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.86e-13;3!DOID:127;2.86e-13;3!DOID:0060072;4.60e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.53e-13,3;DOID:127,3.53e-13,3;DOID:0060072,5.38e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.85e-10!11;UBERON:0004121!3.39e-09!169;UBERON:0000468!1.24e-08!659;UBERON:0000924!1.27e-08!173;UBERON:0006601!1.27e-08!173;UBERON:0003075!6.91e-08!86;UBERON:0007284!6.91e-08!86;UBERON:0000475!1.56e-07!365;UBERON:0002346!4.05e-07!90;UBERON:0000019!7.55e-07!19;UBERON:0000047!7.55e-07!19;UBERON:0004088!7.55e-07!19;UBERON:0003072!7.55e-07!19;UBERON:0003071!7.55e-07!19;UBERON:0004128!7.55e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.41e-18;4!UBERON:0001778;7.17e-14;3!UBERON:0001775;7.17e-14;3!UBERON:0002203;7.44e-12;6!UBERON:0001768;7.44e-12;6!UBERON:0002200;7.44e-12;6!UBERON:0007625;1.01e-09;11!UBERON:0004175;1.36e-08;21!UBERON:0003975;1.23e-07;18!UBERON:0001801;1.47e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.05e-17,4;UBERON:0001778,7.21e-14,3;UBERON:0001775,7.21e-14,3;UBERON:0002203,8.01e-12,6;UBERON:0001768,8.01e-12,6;UBERON:0002200,8.01e-12,6;UBERON:0007625,1.04e-09,11;UBERON:0004175,2.76e-09,25;UBERON:0005795,1.80e-08,22;UBERON:0003975,2.79e-08,22;UBERON:0001801,1.51e-07,14 | |||
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|short_description=p3@SFRP1 | |||
}} |
Revision as of 05:17, 14 September 2013
Short description: | p3@SFRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SFRP1_5end |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | -104bp_to_ENST00000220772_5end |
EntrezGene: | SFRP1 |
HGNC: | 10776 |
UniProt: | Q8N474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.21e-14 | 3 |
ciliated epithelial cell | 7.21e-14 | 3 |
multi-ciliated epithelial cell | 7.21e-14 | 3 |
non-pigmented ciliary epithelial cell | 7.21e-14 | 3 |
neuronal stem cell | 2.27e-08 | 8 |
neuron | 7.75e-07 | 6 |
neuroblast | 7.75e-07 | 6 |
electrically signaling cell | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.05e-17 | 4 |
ciliary epithelium | 7.21e-14 | 3 |
ciliary body | 7.21e-14 | 3 |
vasculature of eye | 8.01e-12 | 6 |
uvea | 8.01e-12 | 6 |
vasculature of head | 8.01e-12 | 6 |
pigment epithelium of eye | 1.04e-09 | 11 |
internal genitalia | 2.76e-09 | 25 |
embryonic uterus | 1.80e-08 | 22 |
internal female genitalia | 2.79e-08 | 22 |
anterior segment of eyeball | 1.51e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.53e-13 | 3 |
leiomyoma | 3.53e-13 | 3 |
benign neoplasm | 5.38e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.