FFCP PHASE1:Mm9::chr4:99322726..99322731,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:99322726..99322731,-|id=chr4:99322726..99322731,-|ontology_enrichment_celltype=CL:0000107!1.12e-18!9;CL:0000221!1.08e-12!44;CL:0000133!1.08e-12!44;CL:0002319!1.64e-11!43;CL:0000540!7.93e-11!33;CL:0000047!7.93e-11!33;CL:0000031!7.93e-11!33;CL:0000404!7.93e-11!33;CL:0000055!3.05e-09!50;CL:0000393!1.42e-08!39;CL:0000211!1.42e-08!39;CL:0000630!3.09e-07!3;CL:0002612!4.89e-07!3|ontology_enrichment_celltype_v019_2=CL:0000107,1.18e-43,9;CL:0002319,2.91e-16,43;CL:0000540,3.40e-16,33;CL:0000047,3.40e-16,33;CL:0000031,3.40e-16,33;CL:0000404,3.40e-16,33;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0000393,1.04e-13,39;CL:0000211,1.04e-13,39;CL:0002321,5.63e-10,70;CL:0000217,6.68e-07,2;CL:0000328,6.68e-07,2;CL:0002573,6.68e-07,2;CL:0002376,6.68e-07,2;CL:0000218,6.68e-07,2;CL:0000692,6.68e-07,2;CL:0002377,6.68e-07,2;CL:0002375,6.68e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.65e-22!11;UBERON:0002410!1.12e-18!9;UBERON:0002240!3.07e-08!6;UBERON:0005174!3.07e-08!6;UBERON:0001137!3.07e-08!6;UBERON:0000011!1.61e-07!3;UBERON:0000013!2.82e-07!3;UBERON:0002005!4.68e-07!3;UBERON:0005428!4.68e-07!3;UBERON:0002257!4.89e-07!3;UBERON:0001948!7.45e-07!5;UBERON:0002315!7.45e-07!5;UBERON:0003076!8.29e-07!12;UBERON:0003057!8.29e-07!12;UBERON:0000073!8.60e-07!75;UBERON:0001016!8.60e-07!75;UBERON:0004121!8.93e-07!102;UBERON:0000924!8.93e-07!102;UBERON:0006601!8.93e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.18e-48,11;UBERON:0002410,1.18e-43,9;UBERON:0000011,2.18e-33,3;UBERON:0010313,1.73e-15,3;UBERON:0002342,1.73e-15,3;UBERON:0002005,1.73e-15,3;UBERON:0005428,1.73e-15,3;UBERON:0005062,1.73e-15,3;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001017,2.72e-07,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,1.1183966749518,0.302904773332736,2.11600368298999,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,1.57754109708128,1.17131623288992,0.215423397732799,2.38968797952552,1.33679204449436,1.13230612315533,0.404810701674894,0.876767573733936,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p@chr4:99322726..99322731,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:99322726..99322731,- | |||
|id=chr4:99322726..99322731,- | |||
|ontology_enrichment_celltype=CL:0000107!1.12e-18!9;CL:0000221!1.08e-12!44;CL:0000133!1.08e-12!44;CL:0002319!1.64e-11!43;CL:0000540!7.93e-11!33;CL:0000047!7.93e-11!33;CL:0000031!7.93e-11!33;CL:0000404!7.93e-11!33;CL:0000055!3.05e-09!50;CL:0000393!1.42e-08!39;CL:0000211!1.42e-08!39;CL:0000630!3.09e-07!3;CL:0002612!4.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.18e-43,9;CL:0002319,2.91e-16,43;CL:0000540,3.40e-16,33;CL:0000047,3.40e-16,33;CL:0000031,3.40e-16,33;CL:0000404,3.40e-16,33;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0000393,1.04e-13,39;CL:0000211,1.04e-13,39;CL:0002321,5.63e-10,70;CL:0000217,6.68e-07,2;CL:0000328,6.68e-07,2;CL:0002573,6.68e-07,2;CL:0002376,6.68e-07,2;CL:0000218,6.68e-07,2;CL:0000692,6.68e-07,2;CL:0002377,6.68e-07,2;CL:0002375,6.68e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.65e-22!11;UBERON:0002410!1.12e-18!9;UBERON:0002240!3.07e-08!6;UBERON:0005174!3.07e-08!6;UBERON:0001137!3.07e-08!6;UBERON:0000011!1.61e-07!3;UBERON:0000013!2.82e-07!3;UBERON:0002005!4.68e-07!3;UBERON:0005428!4.68e-07!3;UBERON:0002257!4.89e-07!3;UBERON:0001948!7.45e-07!5;UBERON:0002315!7.45e-07!5;UBERON:0003076!8.29e-07!12;UBERON:0003057!8.29e-07!12;UBERON:0000073!8.60e-07!75;UBERON:0001016!8.60e-07!75;UBERON:0004121!8.93e-07!102;UBERON:0000924!8.93e-07!102;UBERON:0006601!8.93e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.18e-48,11;UBERON:0002410,1.18e-43,9;UBERON:0000011,2.18e-33,3;UBERON:0010313,1.73e-15,3;UBERON:0002342,1.73e-15,3;UBERON:0002005,1.73e-15,3;UBERON:0005428,1.73e-15,3;UBERON:0005062,1.73e-15,3;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001017,2.72e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,1.1183966749518,0.302904773332736,2.11600368298999,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,1.57754109708128,1.17131623288992,0.215423397732799,2.38968797952552,1.33679204449436,1.13230612315533,0.404810701674894,0.876767573733936,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr4:99322726..99322731,- | |||
}} |
Revision as of 05:41, 14 September 2013
Short description: | p@chr4:99322726..99322731, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:99322726..99322731, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.18e-43 | 9 |
neural cell | 2.91e-16 | 43 |
neuron | 3.40e-16 | 33 |
neuronal stem cell | 3.40e-16 | 33 |
neuroblast | 3.40e-16 | 33 |
electrically signaling cell | 3.40e-16 | 33 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
electrically responsive cell | 1.04e-13 | 39 |
electrically active cell | 1.04e-13 | 39 |
embryonic cell | 5.63e-10 | 70 |
insulating cell | 6.68e-07 | 2 |
myelin accumulating cell | 6.68e-07 | 2 |
Schwann cell | 6.68e-07 | 2 |
non-myelinating Schwann cell | 6.68e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 6.68e-07 | 2 |
terminal Schwann cell | 6.68e-07 | 2 |
immature Schwann cell | 6.68e-07 | 2 |
Schwann cell precursor | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.18e-48 | 11 |
autonomic nervous system | 1.18e-43 | 9 |
parasympathetic nervous system | 2.18e-33 | 3 |
neural crest-derived structure | 1.73e-15 | 3 |
neural crest | 1.73e-15 | 3 |
enteric nervous system | 1.73e-15 | 3 |
vagal neural crest | 1.73e-15 | 3 |
neural fold | 1.73e-15 | 3 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
central nervous system | 2.72e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.