FFCP PHASE1:Hg19::chr8:8377227..8377229,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1300|description=CAGE_peak_at_chr8:8377227..8377229,-|id=chr8:8377227..8377229,-|ontology_enrichment_celltype=CL:0002368!6.30e-23!13;CL:0002076!1.46e-21!43;CL:0000068!6.14e-20!3;CL:0000069!6.14e-20!3;CL:0000307!6.14e-20!3;CL:0000377!6.14e-20!3;CL:0002202!9.89e-18!9;CL:0002632!9.89e-18!9;CL:0000223!5.15e-15!59;CL:0002327!1.05e-14!4;CL:0000066!1.39e-13!254;CL:0000076!8.08e-10!62;CL:0002328!1.48e-09!3;CL:1001319!2.21e-07!1;CL:1000600!2.21e-07!1;CL:0000244!3.63e-07!4;CL:0000731!3.63e-07!4;CL:0002336!4.90e-07!1;CL:0002261!4.90e-07!1;CL:0002170!4.90e-07!1;CL:0002251!5.52e-07!21|ontology_enrichment_celltype_v019=CL:0000307;1.28e-53;3!CL:0002202;3.32e-40;9!CL:0002632;3.32e-40;9!CL:0002368;3.65e-28;13!CL:0002328;1.83e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4|ontology_enrichment_celltype_v019_2=CL:0000068,1.28e-53,3;CL:0000069,1.28e-53,3;CL:0000307,1.28e-53,3;CL:0000377,1.28e-53,3;CL:0002202,3.32e-40,9;CL:0002632,3.32e-40,9;CL:0002368,3.65e-28,13;CL:0002328,1.83e-14,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4;CL:0002076,2.52e-09,42;CL:0000223,5.90e-07,58|ontology_enrichment_development_v019=CL:0000377;1.28e-53;3!CL:0000223;1.04e-07;58|ontology_enrichment_disease=DOID:1749!9.32e-34!14;DOID:3151!1.61e-07!1;DOID:3149!1.61e-07!1;DOID:225!4.09e-07!1;DOID:305!4.64e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003729!6.40e-30!5;UBERON:0003343!1.29e-24!4;UBERON:0004785!1.29e-24!4;UBERON:0000344!1.44e-17!12;UBERON:0001911!1.05e-14!4;UBERON:0005333!1.05e-14!4;UBERON:0008425!1.05e-14!4;UBERON:0005311!1.05e-14!4;UBERON:0000365!1.04e-11!5;UBERON:0007196!2.58e-11!14;UBERON:0001558!2.58e-11!14;UBERON:0000974!5.92e-10!10;UBERON:0005910!7.73e-10!6;UBERON:0004815!1.48e-09!3;UBERON:0002031!1.48e-09!3;UBERON:0003126!7.97e-09!7;UBERON:0001005!7.97e-09!7;UBERON:0001004!2.16e-08!72;UBERON:0000161!1.33e-07!35;UBERON:0000076!1.38e-07!8;UBERON:0004645!2.21e-07!1;UBERON:0001256!2.21e-07!1;UBERON:0001259!2.21e-07!1;UBERON:0002185!2.28e-07!4;UBERON:0005153!2.34e-07!37;UBERON:0000997!2.83e-07!1;UBERON:0005056!2.83e-07!1;UBERON:0004119!6.59e-07!169;UBERON:0000925!6.59e-07!169;UBERON:0006595!6.59e-07!169|ontology_enrichment_uberon_v019=UBERON:0007196;1.52e-24;15!UBERON:0001558;1.52e-24;15!UBERON:0003126;1.02e-23;7!UBERON:0001005;1.02e-23;7!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0005178;1.91e-11;34!UBERON:0002224;1.91e-11;34!UBERON:0000072;3.66e-10;37!UBERON:0005181;1.63e-09;35!UBERON:0000365;3.22e-09;5!UBERON:0002185;3.22e-09;5!UBERON:0000065;4.24e-08;44!UBERON:0005910;6.78e-08;6!UBERON:0000485;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.52e-24,15;UBERON:0001558,1.52e-24,15;UBERON:0003126,1.02e-23,7;UBERON:0001005,1.02e-23,7;UBERON:0004815,1.83e-14,3;UBERON:0002031,1.83e-14,3;UBERON:0005178,2.48e-11,34;UBERON:0002224,2.48e-11,34;UBERON:0005181,4.95e-11,35;UBERON:0008947,3.18e-10,38;UBERON:0003258,3.18e-10,38;UBERON:0000365,2.97e-09,5;UBERON:0002185,3.22e-09,5;UBERON:0000072,2.05e-08,47;UBERON:0005910,6.34e-08,6;UBERON:0000915,1.12e-07,52;UBERON:0000065,2.03e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,3.35151137767894,3.26672954583968,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1300 | |||
|description=CAGE_peak_at_chr8:8377227..8377229,- | |||
|id=chr8:8377227..8377229,- | |||
|ontology_enrichment_celltype=CL:0002368!6.30e-23!13;CL:0002076!1.46e-21!43;CL:0000068!6.14e-20!3;CL:0000069!6.14e-20!3;CL:0000307!6.14e-20!3;CL:0000377!6.14e-20!3;CL:0002202!9.89e-18!9;CL:0002632!9.89e-18!9;CL:0000223!5.15e-15!59;CL:0002327!1.05e-14!4;CL:0000066!1.39e-13!254;CL:0000076!8.08e-10!62;CL:0002328!1.48e-09!3;CL:1001319!2.21e-07!1;CL:1000600!2.21e-07!1;CL:0000244!3.63e-07!4;CL:0000731!3.63e-07!4;CL:0002336!4.90e-07!1;CL:0002261!4.90e-07!1;CL:0002170!4.90e-07!1;CL:0002251!5.52e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.28e-53;3!CL:0002202;3.32e-40;9!CL:0002632;3.32e-40;9!CL:0002368;3.65e-28;13!CL:0002328;1.83e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.28e-53,3;CL:0000069,1.28e-53,3;CL:0000307,1.28e-53,3;CL:0000377,1.28e-53,3;CL:0002202,3.32e-40,9;CL:0002632,3.32e-40,9;CL:0002368,3.65e-28,13;CL:0002328,1.83e-14,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4;CL:0002076,2.52e-09,42;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.28e-53;3!CL:0000223;1.04e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!9.32e-34!14;DOID:3151!1.61e-07!1;DOID:3149!1.61e-07!1;DOID:225!4.09e-07!1;DOID:305!4.64e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!6.40e-30!5;UBERON:0003343!1.29e-24!4;UBERON:0004785!1.29e-24!4;UBERON:0000344!1.44e-17!12;UBERON:0001911!1.05e-14!4;UBERON:0005333!1.05e-14!4;UBERON:0008425!1.05e-14!4;UBERON:0005311!1.05e-14!4;UBERON:0000365!1.04e-11!5;UBERON:0007196!2.58e-11!14;UBERON:0001558!2.58e-11!14;UBERON:0000974!5.92e-10!10;UBERON:0005910!7.73e-10!6;UBERON:0004815!1.48e-09!3;UBERON:0002031!1.48e-09!3;UBERON:0003126!7.97e-09!7;UBERON:0001005!7.97e-09!7;UBERON:0001004!2.16e-08!72;UBERON:0000161!1.33e-07!35;UBERON:0000076!1.38e-07!8;UBERON:0004645!2.21e-07!1;UBERON:0001256!2.21e-07!1;UBERON:0001259!2.21e-07!1;UBERON:0002185!2.28e-07!4;UBERON:0005153!2.34e-07!37;UBERON:0000997!2.83e-07!1;UBERON:0005056!2.83e-07!1;UBERON:0004119!6.59e-07!169;UBERON:0000925!6.59e-07!169;UBERON:0006595!6.59e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.52e-24;15!UBERON:0001558;1.52e-24;15!UBERON:0003126;1.02e-23;7!UBERON:0001005;1.02e-23;7!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0005178;1.91e-11;34!UBERON:0002224;1.91e-11;34!UBERON:0000072;3.66e-10;37!UBERON:0005181;1.63e-09;35!UBERON:0000365;3.22e-09;5!UBERON:0002185;3.22e-09;5!UBERON:0000065;4.24e-08;44!UBERON:0005910;6.78e-08;6!UBERON:0000485;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.52e-24,15;UBERON:0001558,1.52e-24,15;UBERON:0003126,1.02e-23,7;UBERON:0001005,1.02e-23,7;UBERON:0004815,1.83e-14,3;UBERON:0002031,1.83e-14,3;UBERON:0005178,2.48e-11,34;UBERON:0002224,2.48e-11,34;UBERON:0005181,4.95e-11,35;UBERON:0008947,3.18e-10,38;UBERON:0003258,3.18e-10,38;UBERON:0000365,2.97e-09,5;UBERON:0002185,3.22e-09,5;UBERON:0000072,2.05e-08,47;UBERON:0005910,6.34e-08,6;UBERON:0000915,1.12e-07,52;UBERON:0000065,2.03e-07,54 | |||
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|short_description=p@chr8:8377227..8377229,- | |||
}} |
Revision as of 06:12, 14 September 2013
Short description: | p@chr8:8377227..8377229, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:8377227..8377229, - |
Coexpression cluster: | C1300_Tracheal_Bronchial_Small_Keratinocyte_Mammary_bronchial_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.28e-53 | 3 |
branched duct epithelial cell | 1.28e-53 | 3 |
tracheal epithelial cell | 1.28e-53 | 3 |
tracheoblast | 1.28e-53 | 3 |
epithelial cell of tracheobronchial tree | 3.32e-40 | 9 |
epithelial cell of lower respiratory tract | 3.32e-40 | 9 |
respiratory epithelial cell | 3.65e-28 | 13 |
bronchial epithelial cell | 1.83e-14 | 3 |
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
endo-epithelial cell | 2.52e-09 | 42 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.52e-24 | 15 |
lower respiratory tract | 1.52e-24 | 15 |
trachea | 1.02e-23 | 7 |
respiratory airway | 1.02e-23 | 7 |
lower respiratory tract epithelium | 1.83e-14 | 3 |
epithelium of bronchus | 1.83e-14 | 3 |
thoracic cavity element | 2.48e-11 | 34 |
thoracic cavity | 2.48e-11 | 34 |
thoracic segment organ | 4.95e-11 | 35 |
respiratory primordium | 3.18e-10 | 38 |
endoderm of foregut | 3.18e-10 | 38 |
urothelium | 2.97e-09 | 5 |
bronchus | 3.22e-09 | 5 |
segment of respiratory tract | 2.05e-08 | 47 |
transitional epithelium | 6.34e-08 | 6 |
thoracic segment of trunk | 1.12e-07 | 52 |
respiratory tract | 2.03e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.