FFCP PHASE1:Mm9::chr5:122043491..122043502,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11669|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=86bp_to_ENSMUST00000129753_5end|description=CAGE_peak_2_at_Aldh2_5end|id=chr5:122043491..122043502,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!9.31e-13!47;UBERON:0002100!5.87e-12!98;UBERON:0005177!7.58e-10!85;UBERON:0002365!1.61e-09!25;UBERON:0002330!1.61e-09!25;UBERON:0009569!1.77e-09!66;UBERON:0009854!7.07e-09!23;UBERON:0009856!7.07e-09!23;UBERON:0002107!2.39e-08!22;UBERON:0007499!2.39e-08!22;UBERON:0006925!2.39e-08!22;UBERON:0009497!2.39e-08!22;UBERON:0000015!2.39e-08!22;UBERON:0002423!2.39e-08!22;UBERON:0006235!2.39e-08!22;UBERON:0008835!2.39e-08!22;UBERON:0003894!2.39e-08!22;UBERON:0004161!2.39e-08!22;UBERON:0008836!2.39e-08!22;UBERON:0005172!8.16e-08!49;UBERON:0005173!8.16e-08!49;UBERON:0002417!8.16e-08!49;UBERON:0000916!8.16e-08!49;UBERON:0000466!9.64e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.05e-13,45;UBERON:0003104,8.48e-13,61;UBERON:0009142,8.48e-13,61;UBERON:0002100,1.49e-11,90;UBERON:0002365,1.50e-09,25;UBERON:0002330,1.50e-09,25;UBERON:0005177,1.78e-09,79;UBERON:0009569,2.27e-09,66;UBERON:0009854,6.62e-09,23;UBERON:0009856,6.62e-09,23;UBERON:0002107,2.25e-08,22;UBERON:0007499,2.25e-08,22;UBERON:0006925,2.25e-08,22;UBERON:0009497,2.25e-08,22;UBERON:0000015,2.25e-08,22;UBERON:0002423,2.25e-08,22;UBERON:0006235,2.25e-08,22;UBERON:0008835,2.25e-08,22;UBERON:0003894,2.25e-08,22;UBERON:0004161,2.25e-08,22;UBERON:0008836,2.25e-08,22;UBERON:0005172,9.44e-08,49;UBERON:0005173,9.44e-08,49;UBERON:0002417,9.44e-08,49;UBERON:0000916,9.44e-08,49|phase1_expression=3.04282809499109,2.44282785347553,5.91499011206397,6.35174843744343,8.5152274090879,2.68606835059024,2.10251376535973,0.258246646883153,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,1.66554880907831,2.02475267389826,2.09868563438444,1.26184866143295,1.09691546884591,2.12194825899015,9.43980520676875,0.695036658406197,0.783599367416806,3.83981814704176,4.5881856213434,3.44539178469012,4.73838195774982,4.95583835177545,5.32065574477847,2.77233142735924,2.43903561720835,3.81018404075779,4.30545351309199,0,2.02196133825892,2.32728503501889,2.85837098767317,5.02237956884289,2.3440060335714,1.57057123192139,1.76469446409304,2.73218193983378,2.42755176515577,9.31636453019272,6.79225439170748,6.9747765821439,24.2541316747892,2.8343270329458,5.27246838562732,5.05517737593137,5.87942970826523,2.87505128729943,0.335565212115473,0.725362142011344,0,5.91696702882678,6.5902691185914,7.21940929188419,0.809265843438391,2.64495489636016,0.633831403506179,3.38844532069132,8.00365316500025,9.44894703145469,10.8775299882367,10.6572017241915,8.98800331555214,11.1423308543251,0.103689612308478,0,0,5.14171771926846,2.87129103237098,0.244981598429908,0.191690942036473,0,4.40463523997555,3.57524546638526,3.5329502648936,1.05509030184155,0.548925861614458,1.04182674111352,2.51264699101243,6.75315132038016,5.95913166329559,5.00868595305235,3.13217697758026,1.86399445825301,0.832988126665025,1.20914496170857,4.34796733052517,39.5794983411438,84.3164453797611,117.655295777044,96.8166861997027,112.454748661431,36.9368824946507,8.01022516116871,10.9110121933205,8.48014978824817,3.38024207464033,2.56652954828636,0,0,4.32982082022428,3.04031838570118,4.54972000513305,40.6494611799854,2.33044095282455,23.4538579722423,2.08182392119363,6.08930956624282,3.22861696158482,4.6724018571313,6.58496759959947,21.4889871173745,3.21353458054686,14.749134405831,4.42305275974937,1.94120219936891,2.42925670306433,3.87900202508178,14.9113408974498,3.51336956413857,2.09446706813455,4.85368404896324,2.27648736561249,3.59941638596045,1.90605340609597,4.6435098215495,3.66000482254901,1.25654352112864,2.78118912307642,1.53429274398198,3.74018480207208,2.92034273521964,4.17541391786297,6.22034853050465,19.9650979162603,15.7831391914855,1.69156575851515,2.5289231487682,1.26043490863744,1.35634336052144,1.36072998302656,2.0498195245576,1.40552586839593,8.2785078636485,2.37124792226126,2.26927296201383,2.11141348996739,3.28793598641362,1.39023624612799,1.39300866608867,1.23469281844766,1.39323986772945,1.40442637462647,1.80143534980301,1.98914449576915,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,1.16266972375204,1.07309360559848,0.934122738937356,1.6455984991348,1.80584210487005,4.13450928683864,2.92399974850665,4.17145219052996,5.77087600669599,3.78521907415429,0.720332286654991,10.5734010554815,4.23120906661671,0.853153002140936,1.39342003116263,1.03093969057675,2.42020229548011,1.33426826306922,1.71203063501303,3.32170343081158,2.47048432086016,4.02136334080431,5.76973768919337,3.8992817423824,4.49409704327111,5.40345124686736,7.76650965692032,3.41402221715547,1.71372768914593,2.25415471346161,2.64746726198909,2.32742984601151,3.7873342740772,6.45012678667424,21.1082511610831,17.4268587903926,28.3813477020141,9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| ||
|EntrezGene=11669 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt= | |||
|association_with_transcript=86bp_to_ENSMUST00000129753_5end | |||
|description=CAGE_peak_2_at_Aldh2_5end | |||
|id=chr5:122043491..122043502,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.31e-13!47;UBERON:0002100!5.87e-12!98;UBERON:0005177!7.58e-10!85;UBERON:0002365!1.61e-09!25;UBERON:0002330!1.61e-09!25;UBERON:0009569!1.77e-09!66;UBERON:0009854!7.07e-09!23;UBERON:0009856!7.07e-09!23;UBERON:0002107!2.39e-08!22;UBERON:0007499!2.39e-08!22;UBERON:0006925!2.39e-08!22;UBERON:0009497!2.39e-08!22;UBERON:0000015!2.39e-08!22;UBERON:0002423!2.39e-08!22;UBERON:0006235!2.39e-08!22;UBERON:0008835!2.39e-08!22;UBERON:0003894!2.39e-08!22;UBERON:0004161!2.39e-08!22;UBERON:0008836!2.39e-08!22;UBERON:0005172!8.16e-08!49;UBERON:0005173!8.16e-08!49;UBERON:0002417!8.16e-08!49;UBERON:0000916!8.16e-08!49;UBERON:0000466!9.64e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.05e-13,45;UBERON:0003104,8.48e-13,61;UBERON:0009142,8.48e-13,61;UBERON:0002100,1.49e-11,90;UBERON:0002365,1.50e-09,25;UBERON:0002330,1.50e-09,25;UBERON:0005177,1.78e-09,79;UBERON:0009569,2.27e-09,66;UBERON:0009854,6.62e-09,23;UBERON:0009856,6.62e-09,23;UBERON:0002107,2.25e-08,22;UBERON:0007499,2.25e-08,22;UBERON:0006925,2.25e-08,22;UBERON:0009497,2.25e-08,22;UBERON:0000015,2.25e-08,22;UBERON:0002423,2.25e-08,22;UBERON:0006235,2.25e-08,22;UBERON:0008835,2.25e-08,22;UBERON:0003894,2.25e-08,22;UBERON:0004161,2.25e-08,22;UBERON:0008836,2.25e-08,22;UBERON:0005172,9.44e-08,49;UBERON:0005173,9.44e-08,49;UBERON:0002417,9.44e-08,49;UBERON:0000916,9.44e-08,49 | |||
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| |||
|short_description=p2@Aldh2 | |||
}} |
Revision as of 06:16, 14 September 2013
Short description: | p2@Aldh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aldh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 86bp_to_ENSMUST00000129753_5end |
EntrezGene: | Aldh2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 5.05e-13 | 45 |
mesenchyme | 8.48e-13 | 61 |
entire embryonic mesenchyme | 8.48e-13 | 61 |
trunk | 1.49e-11 | 90 |
exocrine gland | 1.50e-09 | 25 |
exocrine system | 1.50e-09 | 25 |
trunk region element | 1.78e-09 | 79 |
subdivision of trunk | 2.27e-09 | 66 |
digestive tract diverticulum | 6.62e-09 | 23 |
sac | 6.62e-09 | 23 |
liver | 2.25e-08 | 22 |
epithelial sac | 2.25e-08 | 22 |
digestive gland | 2.25e-08 | 22 |
epithelium of foregut-midgut junction | 2.25e-08 | 22 |
anatomical boundary | 2.25e-08 | 22 |
hepatobiliary system | 2.25e-08 | 22 |
foregut-midgut junction | 2.25e-08 | 22 |
hepatic diverticulum | 2.25e-08 | 22 |
liver primordium | 2.25e-08 | 22 |
septum transversum | 2.25e-08 | 22 |
liver bud | 2.25e-08 | 22 |
abdomen element | 9.44e-08 | 49 |
abdominal segment element | 9.44e-08 | 49 |
abdominal segment of trunk | 9.44e-08 | 49 |
abdomen | 9.44e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.