FFCP PHASE1:Mm9::chr5:125764307..125764324,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20778|HGNC=|MCL_coexpression_id=1190|UniProt=|association_with_transcript=204bp_to_ENSMUST00000124582_5end|description=CAGE_peak_7_at_Scarb1_5end|id=chr5:125764307..125764324,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.28e-10!49;UBERON:0005173!4.28e-10!49;UBERON:0002417!4.28e-10!49;UBERON:0000916!4.28e-10!49;UBERON:0002369!6.36e-08!7;UBERON:0006858!6.36e-08!7;UBERON:0009569!1.08e-07!66;UBERON:0005177!3.61e-07!85;UBERON:0005256!9.44e-07!47;UBERON:0000466!9.86e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.52e-31,7;UBERON:0006858,6.52e-31,7;UBERON:0003064,2.50e-15,14;UBERON:0005256,6.69e-10,45;UBERON:0005172,5.27e-09,49;UBERON:0005173,5.27e-09,49;UBERON:0002417,5.27e-09,49;UBERON:0000916,5.27e-09,49;UBERON:0002368,3.75e-07,60;UBERON:0003104,5.13e-07,61;UBERON:0009142,5.13e-07,61;UBERON:0000305,6.32e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0.988866362566974,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.0755715601067855,0,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,2.52351636410202,1.56136794089522,6.08930956624282,4.84292544237723,5.72746034099966,3.17489509266403,0.628332956648377,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0.393117990226406,0,0,0.482354319504834,0,0,0.810676133875177,0.549122826376163,8.62609239164127,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0.716906393857656,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.704015124191131,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0.136694227721025,0.686334519619568,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,1.80823752868824,1.01373675294467,0.469428954583016,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.463735671240843|short_description=p7@Scarb1}} | ||
|EntrezGene=20778 | |||
|HGNC= | |||
|MCL_coexpression_id=1190 | |||
|UniProt= | |||
|association_with_transcript=204bp_to_ENSMUST00000124582_5end | |||
|description=CAGE_peak_7_at_Scarb1_5end | |||
|id=chr5:125764307..125764324,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.28e-10!49;UBERON:0005173!4.28e-10!49;UBERON:0002417!4.28e-10!49;UBERON:0000916!4.28e-10!49;UBERON:0002369!6.36e-08!7;UBERON:0006858!6.36e-08!7;UBERON:0009569!1.08e-07!66;UBERON:0005177!3.61e-07!85;UBERON:0005256!9.44e-07!47;UBERON:0000466!9.86e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.52e-31,7;UBERON:0006858,6.52e-31,7;UBERON:0003064,2.50e-15,14;UBERON:0005256,6.69e-10,45;UBERON:0005172,5.27e-09,49;UBERON:0005173,5.27e-09,49;UBERON:0002417,5.27e-09,49;UBERON:0000916,5.27e-09,49;UBERON:0002368,3.75e-07,60;UBERON:0003104,5.13e-07,61;UBERON:0009142,5.13e-07,61;UBERON:0000305,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0.988866362566974,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.0755715601067855,0,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,2.52351636410202,1.56136794089522,6.08930956624282,4.84292544237723,5.72746034099966,3.17489509266403,0.628332956648377,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0.393117990226406,0,0,0.482354319504834,0,0,0.810676133875177,0.549122826376163,8.62609239164127,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0.716906393857656,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.704015124191131,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0.136694227721025,0.686334519619568,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,1.80823752868824,1.01373675294467,0.469428954583016,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p7@Scarb1 | |||
}} |
Revision as of 06:29, 14 September 2013
Short description: | p7@Scarb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Scarb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1190 |
Association with transcript: | 204bp_to_ENSMUST00000124582_5end |
EntrezGene: | Scarb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.52e-31 | 7 |
adrenal/interrenal gland | 6.52e-31 | 7 |
intermediate mesoderm | 2.50e-15 | 14 |
trunk mesenchyme | 6.69e-10 | 45 |
abdomen element | 5.27e-09 | 49 |
abdominal segment element | 5.27e-09 | 49 |
abdominal segment of trunk | 5.27e-09 | 49 |
abdomen | 5.27e-09 | 49 |
endocrine gland | 3.75e-07 | 60 |
mesenchyme | 5.13e-07 | 61 |
entire embryonic mesenchyme | 5.13e-07 | 61 |
amnion | 6.32e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.