FFCP PHASE1:Hg19::chr9:13446440..13446456,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-68bp_to_ENST00000428006_5end|coexpression_cluster_id=C557|description=CAGE_peak_2_at_ENST00000428006_5end|id=chr9:13446440..13446456,+|ontology_enrichment_celltype=CL:0005020!7.85e-34!6;CL:0002138!7.85e-34!6;CL:0005022!7.85e-34!6;CL:0002139!1.43e-26!24;CL:0002144!3.72e-18!3;CL:0000115!1.56e-17!35;CL:0002078!1.67e-13!44;CL:0000213!6.19e-10!57;CL:0000215!6.19e-10!57;CL:0000071!1.08e-07!18;CL:0002546!1.08e-07!18|ontology_enrichment_celltype_v019=CL:0002144;1.28e-84;3!CL:0002138;3.86e-75;6!CL:0002139;1.82e-57;24!CL:0000115;1.22e-27;36!CL:0002078;5.26e-25;45!CL:0000071;7.17e-15;18!CL:0000213;1.01e-14;58!CL:0000215;1.01e-14;58|ontology_enrichment_celltype_v019_2=CL:0002144,1.28e-84,3;CL:0005020,3.86e-75,6;CL:0002138,3.86e-75,6;CL:0005022,3.86e-75,6;CL:0002139,1.82e-57,24;CL:0000115,1.73e-38,36;CL:0002078,6.99e-31,45;CL:0000213,4.74e-24,58;CL:0000215,4.74e-24,58;CL:0000071,7.17e-15,18;CL:0002546,7.17e-15,18;CL:0000222,1.14e-11,121|ontology_enrichment_development_v019=CL:0005022;3.86e-75;6!CL:0002546;7.17e-15;18!CL:0000222;7.28e-07;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!4.80e-27!10;UBERON:0001473!3.02e-25!8;UBERON:0004536!3.02e-25!8;UBERON:0006558!3.02e-25!8;UBERON:0001915!3.72e-18!3;UBERON:0001982!3.72e-18!3;UBERON:0000055!6.48e-13!69;UBERON:0003127!1.01e-11!2;UBERON:0002049!6.56e-11!79;UBERON:0007798!6.56e-11!79;UBERON:0001009!3.72e-09!113;UBERON:0004535!3.16e-08!110;UBERON:0001986!1.08e-07!18;UBERON:0004638!1.08e-07!18;UBERON:0004852!1.08e-07!18;UBERON:0006122!4.69e-07!1;UBERON:0000029!6.99e-07!1|ontology_enrichment_uberon_v019=UBERON:0010523;1.28e-84;3!UBERON:0001915;1.28e-84;3!UBERON:0001982;1.28e-84;3!UBERON:0001473;1.41e-56;8!UBERON:0004536;1.41e-56;8!UBERON:0006558;1.41e-56;8!UBERON:0002465;1.98e-45;10!UBERON:0000055;6.27e-18;65!UBERON:0002405;2.94e-17;27!UBERON:0004638;7.17e-15;18!UBERON:0001986;7.17e-15;18!UBERON:0004852;7.17e-15;18!UBERON:0000487;2.64e-12;22!UBERON:0002049;2.34e-11;75!UBERON:0007798;2.34e-11;75!UBERON:0006914;6.47e-11;25!UBERON:0002193;2.05e-10;42!UBERON:0000490;7.40e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.28e-84,3;UBERON:0001915,1.28e-84,3;UBERON:0001982,1.28e-84,3;UBERON:0001473,1.41e-56,8;UBERON:0004536,1.41e-56,8;UBERON:0006558,1.41e-56,8;UBERON:0002465,1.98e-45,10;UBERON:0000055,1.45e-20,68;UBERON:0002049,5.71e-18,78;UBERON:0007798,5.71e-18,78;UBERON:0004638,7.17e-15,18;UBERON:0001986,7.17e-15,18;UBERON:0004852,7.17e-15,18;UBERON:0004535,6.23e-13,109;UBERON:0001009,1.36e-12,112;UBERON:0000487,2.64e-12,22;UBERON:0006914,6.47e-11,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.71153252537342,1.33888245105868,3.62546385398232,18.2465305372443,4.39311703586705,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92958949253154,5.55582615091933,17.1228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENST00000428006_5end | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_2_at_ENST00000428006_5end | |||
|id=chr9:13446440..13446456,+ | |||
|ontology_enrichment_celltype=CL:0005020!7.85e-34!6;CL:0002138!7.85e-34!6;CL:0005022!7.85e-34!6;CL:0002139!1.43e-26!24;CL:0002144!3.72e-18!3;CL:0000115!1.56e-17!35;CL:0002078!1.67e-13!44;CL:0000213!6.19e-10!57;CL:0000215!6.19e-10!57;CL:0000071!1.08e-07!18;CL:0002546!1.08e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.28e-84;3!CL:0002138;3.86e-75;6!CL:0002139;1.82e-57;24!CL:0000115;1.22e-27;36!CL:0002078;5.26e-25;45!CL:0000071;7.17e-15;18!CL:0000213;1.01e-14;58!CL:0000215;1.01e-14;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.28e-84,3;CL:0005020,3.86e-75,6;CL:0002138,3.86e-75,6;CL:0005022,3.86e-75,6;CL:0002139,1.82e-57,24;CL:0000115,1.73e-38,36;CL:0002078,6.99e-31,45;CL:0000213,4.74e-24,58;CL:0000215,4.74e-24,58;CL:0000071,7.17e-15,18;CL:0002546,7.17e-15,18;CL:0000222,1.14e-11,121 | |||
|ontology_enrichment_development_v019=CL:0005022;3.86e-75;6!CL:0002546;7.17e-15;18!CL:0000222;7.28e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!4.80e-27!10;UBERON:0001473!3.02e-25!8;UBERON:0004536!3.02e-25!8;UBERON:0006558!3.02e-25!8;UBERON:0001915!3.72e-18!3;UBERON:0001982!3.72e-18!3;UBERON:0000055!6.48e-13!69;UBERON:0003127!1.01e-11!2;UBERON:0002049!6.56e-11!79;UBERON:0007798!6.56e-11!79;UBERON:0001009!3.72e-09!113;UBERON:0004535!3.16e-08!110;UBERON:0001986!1.08e-07!18;UBERON:0004638!1.08e-07!18;UBERON:0004852!1.08e-07!18;UBERON:0006122!4.69e-07!1;UBERON:0000029!6.99e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.28e-84;3!UBERON:0001915;1.28e-84;3!UBERON:0001982;1.28e-84;3!UBERON:0001473;1.41e-56;8!UBERON:0004536;1.41e-56;8!UBERON:0006558;1.41e-56;8!UBERON:0002465;1.98e-45;10!UBERON:0000055;6.27e-18;65!UBERON:0002405;2.94e-17;27!UBERON:0004638;7.17e-15;18!UBERON:0001986;7.17e-15;18!UBERON:0004852;7.17e-15;18!UBERON:0000487;2.64e-12;22!UBERON:0002049;2.34e-11;75!UBERON:0007798;2.34e-11;75!UBERON:0006914;6.47e-11;25!UBERON:0002193;2.05e-10;42!UBERON:0000490;7.40e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.28e-84,3;UBERON:0001915,1.28e-84,3;UBERON:0001982,1.28e-84,3;UBERON:0001473,1.41e-56,8;UBERON:0004536,1.41e-56,8;UBERON:0006558,1.41e-56,8;UBERON:0002465,1.98e-45,10;UBERON:0000055,1.45e-20,68;UBERON:0002049,5.71e-18,78;UBERON:0007798,5.71e-18,78;UBERON:0004638,7.17e-15,18;UBERON:0001986,7.17e-15,18;UBERON:0004852,7.17e-15,18;UBERON:0004535,6.23e-13,109;UBERON:0001009,1.36e-12,112;UBERON:0000487,2.64e-12,22;UBERON:0006914,6.47e-11,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.71153252537342,1.33888245105868,3.62546385398232,18.2465305372443,4.39311703586705,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92958949253154,5.55582615091933,17.1228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.124149428591716,0,0,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@ENST00000428006 | |||
}} |
Revision as of 07:54, 14 September 2013
Short description: | p2@ENST00000428006 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000428006_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | -68bp_to_ENST00000428006_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.28e-84 | 3 |
lymphangioblast | 3.86e-75 | 6 |
endothelial cell of lymphatic vessel | 3.86e-75 | 6 |
vascular lymphangioblast | 3.86e-75 | 6 |
endothelial cell of vascular tree | 1.82e-57 | 24 |
endothelial cell | 1.73e-38 | 36 |
meso-epithelial cell | 6.99e-31 | 45 |
lining cell | 4.74e-24 | 58 |
barrier cell | 4.74e-24 | 58 |
blood vessel endothelial cell | 7.17e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.17e-15 | 18 |
mesodermal cell | 1.14e-11 | 121 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.28e-84 | 3 |
endothelium of capillary | 1.28e-84 | 3 |
capillary | 1.28e-84 | 3 |
lymphatic vessel | 1.41e-56 | 8 |
lymph vasculature | 1.41e-56 | 8 |
lymphatic part of lymphoid system | 1.41e-56 | 8 |
lymphoid system | 1.98e-45 | 10 |
vessel | 1.45e-20 | 68 |
vasculature | 5.71e-18 | 78 |
vascular system | 5.71e-18 | 78 |
blood vessel endothelium | 7.17e-15 | 18 |
endothelium | 7.17e-15 | 18 |
cardiovascular system endothelium | 7.17e-15 | 18 |
cardiovascular system | 6.23e-13 | 109 |
circulatory system | 1.36e-12 | 112 |
simple squamous epithelium | 2.64e-12 | 22 |
squamous epithelium | 6.47e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.