FFCP PHASE1:Hg19::chr9:137619101..137619121,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C396|description=CAGE_peak_at_chr9:137619101..137619121,+|id=chr9:137619101..137619121,+|ontology_enrichment_celltype=CL:0000055!2.64e-26!180;CL:0000057!2.07e-15!75;CL:0000183!3.26e-13!59;CL:0000680!1.71e-12!57;CL:0000056!1.71e-12!57;CL:0000355!1.71e-12!57;CL:0000187!6.68e-12!54;CL:0000222!1.86e-11!119;CL:0000393!4.13e-10!60;CL:0000211!4.13e-10!60;CL:0000192!9.24e-10!42;CL:0000514!9.24e-10!42;CL:0000359!1.23e-07!32;CL:0002334!1.54e-07!12;CL:0002371!2.01e-07!591;CL:0000144!2.15e-07!625|ontology_enrichment_celltype_v019=CL:0000134;1.18e-13;55!CL:0000723;1.07e-11;61!CL:0000048;2.32e-11;58!CL:0000349;1.83e-10;19!CL:0002334;3.06e-09;12!CL:0000034;3.51e-08;69!CL:0002494;4.30e-08;16!CL:0002570;6.36e-08;8!CL:0000499;1.43e-07;28!CL:0002320;1.88e-07;188|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-16,76;CL:0000048,1.57e-12,427;CL:0000723,7.86e-12,433;CL:0000034,6.14e-11,441;CL:0000349,2.13e-10,19;CL:0002334,4.41e-09,12;CL:0002320,2.36e-08,361;CL:0002570,4.04e-08,8;CL:0002494,4.44e-08,16;CL:0000134,5.39e-08,354;CL:0000499,1.20e-07,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;8.19e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,7.84e-07,14|ontology_enrichment_uberon=UBERON:0001134!5.91e-13!61;UBERON:0002036!5.91e-13!61;UBERON:0003082!5.91e-13!61;UBERON:0002385!6.49e-13!63;UBERON:0001015!6.49e-13!63;UBERON:0000383!6.49e-13!63;UBERON:0000914!1.38e-11!83;UBERON:0002329!1.38e-11!83;UBERON:0003077!1.38e-11!83;UBERON:0003059!1.38e-11!83;UBERON:0007282!1.38e-11!83;UBERON:0009618!1.38e-11!83;UBERON:0007285!1.38e-11!83;UBERON:0004872!1.47e-11!84;UBERON:0004290!8.76e-11!70;UBERON:0005256!1.96e-09!143;UBERON:0002049!2.59e-09!79;UBERON:0007798!2.59e-09!79;UBERON:0000490!4.68e-09!138;UBERON:0003914!9.39e-09!118;UBERON:0001637!1.56e-08!42;UBERON:0003509!1.56e-08!42;UBERON:0004572!1.56e-08!42;UBERON:0001013!2.53e-08!14;UBERON:0004535!2.64e-08!110;UBERON:0000478!4.85e-08!24;UBERON:0000486!5.19e-08!82;UBERON:0001009!7.55e-08!113;UBERON:0001981!9.52e-08!60;UBERON:0007500!9.52e-08!60;UBERON:0004537!9.52e-08!60;UBERON:0006965!9.52e-08!60;UBERON:0000468!8.64e-07!659;UBERON:0000055!8.79e-07!69|ontology_enrichment_uberon_v019=UBERON:0001013;2.97e-09;14!UBERON:0000478;1.11e-08;24!UBERON:0003104;1.56e-07;7!UBERON:0009142;1.56e-07;7!UBERON:0002384;4.14e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.14e-09,14;UBERON:0000478,1.26e-08,24;UBERON:0002384,1.67e-08,371;UBERON:0004872,1.06e-07,83;UBERON:0001134,3.68e-07,62;UBERON:0002036,3.68e-07,62;UBERON:0003082,3.68e-07,62|phase1_expression=1.09007027562334,4.71021152560163,1.9733616573436,7.00513088471913,5.81049422755474,12.2127393374052,7.59899634504932,0.631719873426831,1.30592814099919,0.491467873003018,0.697801167972428,3.9319446983431,8.17677632508206,0.247532705920093,0.662794751455832,4.70627602516243,1.80808358407193,3.65155045193687,3.41552959153355,0.861847406537515,3.4680117511523,2.82109249330279,0,0.821246550437305,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,0.511450247374121,1.80719576192283,5.0133791063589,8.25625158076695,0,27.7381876072502,0.567208902984407,3.32594096193846,1.49319135678314,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,1.13061588384802,3.77549492588915,2.47606237746061,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,9.72170337458112,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,10.4364109856017,2.91250176828533,0.132409180813219,23.8074395221515,2.12801029319014,10.6528744027038,2.1349799145941,13.5667151629438,0,2.55950276932407,1.47115712802113,2.8757911252537,14.404398112,0,0,0,0,0.23486899728753,0.323745888736263,0,0.408308342509787,0.859840221182376,0.619954687054593,0,3.95627086845691,0,8.62341770179486,0.336672227908132,1.12606667884768,0,0.877955241761676,3.67785354958824,1.35214253015937,1.47461838108027,6.99619579186562,2.98980344345994,1.48352330811693,7.50227740211006,1.23663035086127,6.69865404118636,1.48893485065272,1.68776332241266,1.85130309806277,6.56327813034698,0.920498986422993,4.0411514204703,13.845374108148,1.0075209822764,1.18692414617341,0,0,0,0,0.132529768321485,0.116193942869518,0.621966330092223,0,0.36497735907583,0,7.07565032012174,0,0.928735856063958,2.16563844500876,1.41968160047813,1.85443159085912,0.723033089650446,1.21323370005633,0.871517776369625,0.71181185733329,0.404493924480493,0.784885860501384,0,0,8.41450642820675,2.057870056657,11.7606969108434,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,1.44331342025273,0.115930404975077,1.995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0,0,0.102662806856247,6.95888658802919,11.6570638334193,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,1.96703604453562,0,0.245148321753905,0,0,0,2.5359343655004,5.09781344063451,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0.436350690340377,4.7612415646386,14.5078057085033,4.62175628631418,16.439809360704,0.126166424835079,0,0.886889507080059,0,0,0,0,0.0757786982182394,0,0,0,0,3.80903090341985,0.0645889098360061,0,1.34558235096736,0,1.81905470062397,0.217716747896961,2.39563310759697,0,0.143444410785353,5.65522606128223,0,0,0,0,18.7712753922763,0.366724332548599,10.5793006362092,0.665756774185513,0,0|short_description=p@chr9:137619101..137619121,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137619101..137619121,+ | |||
|id=chr9:137619101..137619121,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.64e-26!180;CL:0000057!2.07e-15!75;CL:0000183!3.26e-13!59;CL:0000680!1.71e-12!57;CL:0000056!1.71e-12!57;CL:0000355!1.71e-12!57;CL:0000187!6.68e-12!54;CL:0000222!1.86e-11!119;CL:0000393!4.13e-10!60;CL:0000211!4.13e-10!60;CL:0000192!9.24e-10!42;CL:0000514!9.24e-10!42;CL:0000359!1.23e-07!32;CL:0002334!1.54e-07!12;CL:0002371!2.01e-07!591;CL:0000144!2.15e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.18e-13;55!CL:0000723;1.07e-11;61!CL:0000048;2.32e-11;58!CL:0000349;1.83e-10;19!CL:0002334;3.06e-09;12!CL:0000034;3.51e-08;69!CL:0002494;4.30e-08;16!CL:0002570;6.36e-08;8!CL:0000499;1.43e-07;28!CL:0002320;1.88e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-16,76;CL:0000048,1.57e-12,427;CL:0000723,7.86e-12,433;CL:0000034,6.14e-11,441;CL:0000349,2.13e-10,19;CL:0002334,4.41e-09,12;CL:0002320,2.36e-08,361;CL:0002570,4.04e-08,8;CL:0002494,4.44e-08,16;CL:0000134,5.39e-08,354;CL:0000499,1.20e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!5.91e-13!61;UBERON:0002036!5.91e-13!61;UBERON:0003082!5.91e-13!61;UBERON:0002385!6.49e-13!63;UBERON:0001015!6.49e-13!63;UBERON:0000383!6.49e-13!63;UBERON:0000914!1.38e-11!83;UBERON:0002329!1.38e-11!83;UBERON:0003077!1.38e-11!83;UBERON:0003059!1.38e-11!83;UBERON:0007282!1.38e-11!83;UBERON:0009618!1.38e-11!83;UBERON:0007285!1.38e-11!83;UBERON:0004872!1.47e-11!84;UBERON:0004290!8.76e-11!70;UBERON:0005256!1.96e-09!143;UBERON:0002049!2.59e-09!79;UBERON:0007798!2.59e-09!79;UBERON:0000490!4.68e-09!138;UBERON:0003914!9.39e-09!118;UBERON:0001637!1.56e-08!42;UBERON:0003509!1.56e-08!42;UBERON:0004572!1.56e-08!42;UBERON:0001013!2.53e-08!14;UBERON:0004535!2.64e-08!110;UBERON:0000478!4.85e-08!24;UBERON:0000486!5.19e-08!82;UBERON:0001009!7.55e-08!113;UBERON:0001981!9.52e-08!60;UBERON:0007500!9.52e-08!60;UBERON:0004537!9.52e-08!60;UBERON:0006965!9.52e-08!60;UBERON:0000468!8.64e-07!659;UBERON:0000055!8.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.97e-09;14!UBERON:0000478;1.11e-08;24!UBERON:0003104;1.56e-07;7!UBERON:0009142;1.56e-07;7!UBERON:0002384;4.14e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.14e-09,14;UBERON:0000478,1.26e-08,24;UBERON:0002384,1.67e-08,371;UBERON:0004872,1.06e-07,83;UBERON:0001134,3.68e-07,62;UBERON:0002036,3.68e-07,62;UBERON:0003082,3.68e-07,62 | |||
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| |||
|short_description=p@chr9:137619101..137619121,+ | |||
}} |
Revision as of 08:05, 14 September 2013
Short description: | p@chr9:137619101..137619121, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:137619101..137619121, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-16 | 76 |
multi fate stem cell | 1.57e-12 | 427 |
somatic stem cell | 7.86e-12 | 433 |
stem cell | 6.14e-11 | 441 |
extraembryonic cell | 2.13e-10 | 19 |
preadipocyte | 4.41e-09 | 12 |
connective tissue cell | 2.36e-08 | 361 |
mesenchymal stem cell of adipose | 4.04e-08 | 8 |
cardiocyte | 4.44e-08 | 16 |
mesenchymal cell | 5.39e-08 | 354 |
stromal cell | 1.20e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.14e-09 | 14 |
extraembryonic structure | 1.26e-08 | 24 |
connective tissue | 1.67e-08 | 371 |
splanchnic layer of lateral plate mesoderm | 1.06e-07 | 83 |
skeletal muscle tissue | 3.68e-07 | 62 |
striated muscle tissue | 3.68e-07 | 62 |
myotome | 3.68e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.84e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.