FFCP PHASE1:Mm9::chr6:122527924..122527962,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:122527924..122527962,-|id=chr6:122527924..122527962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,1.25e-16,4;CL:0000766,1.25e-16,4;CL:0000234,1.25e-16,4;CL:0000576,1.25e-16,4;CL:0000235,1.25e-16,4;CL:0000864,1.25e-16,4;CL:0002009,1.25e-16,4;CL:0000040,1.25e-16,4;CL:0000559,1.25e-16,4;CL:0002092,4.54e-13,3;CL:0002540,4.54e-13,3;CL:0002476,1.25e-09,2;CL:0000473,1.48e-09,7;CL:0000557,1.48e-09,7;CL:0000878,1.13e-08,2;CL:0000129,1.13e-08,2;CL:0002320,3.68e-07,46;CL:0000134,3.68e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.23e-13,22;UBERON:0004765,1.23e-13,22;UBERON:0001434,1.23e-13,22;UBERON:0002371,8.04e-12,16;UBERON:0002204,6.24e-09,32;UBERON:0002384,3.68e-07,46|phase1_expression=0,0,0.909998478779072,0,1.00179145989269,0,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0.699561878128147,0.157731082679119,0,0,0,0.198581902401771,0,0.639969691173627,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,0,0,0,0,0,3.5995988691256,3.9554654502679,2.1314403448383,1.49800055259202,1.92109152660777,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,0,0,9.51959867190851,0,0.649776417447669,1.79210754838934,0.421333260395256,0.340860645156116,0,1.06001872353102,0,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,0.11418387971906,0,0.593768556259299,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,1.54589062922275,1.93950101254089,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.243206428637567,0,0.219550115291051,0,0.210289948564127,0.102904612379284,2.97376904685418,1.32225283331772,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.823494773620054,1.25667604400135,0.397912944082302,0.19496408711912,1.79763881730844,2.59365659849633,0.398282546508734,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0,0,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.549122826376163,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,36.1899081454253,201.789008696741,0,0.275936746304732,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0,0,0.567760340833074,0,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,1.45740418314925,0.18542530201051,0.170870880797853,0.412773735926445,0.925972636848558,0.376736914009382,0.27338845544205,0,0.169978429993855,0.279902904647316,0,2.86401185404534,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0.337912250981556,0,0.2604087696879,0,0,0,0,0,0,0.649604114888975,0,0,0,0,0.100966449948148,0.228620419965,0.403304740547362,0.584747284438515,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr6:122527924..122527962,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:122527924..122527962,- | |||
|id=chr6:122527924..122527962,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.25e-16,4;CL:0000766,1.25e-16,4;CL:0000234,1.25e-16,4;CL:0000576,1.25e-16,4;CL:0000235,1.25e-16,4;CL:0000864,1.25e-16,4;CL:0002009,1.25e-16,4;CL:0000040,1.25e-16,4;CL:0000559,1.25e-16,4;CL:0002092,4.54e-13,3;CL:0002540,4.54e-13,3;CL:0002476,1.25e-09,2;CL:0000473,1.48e-09,7;CL:0000557,1.48e-09,7;CL:0000878,1.13e-08,2;CL:0000129,1.13e-08,2;CL:0002320,3.68e-07,46;CL:0000134,3.68e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.23e-13,22;UBERON:0004765,1.23e-13,22;UBERON:0001434,1.23e-13,22;UBERON:0002371,8.04e-12,16;UBERON:0002204,6.24e-09,32;UBERON:0002384,3.68e-07,46 | |||
|phase1_expression=0,0,0.909998478779072,0,1.00179145989269,0,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0.699561878128147,0.157731082679119,0,0,0,0.198581902401771,0,0.639969691173627,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,0,0,0,0,0,3.5995988691256,3.9554654502679,2.1314403448383,1.49800055259202,1.92109152660777,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,0,0,9.51959867190851,0,0.649776417447669,1.79210754838934,0.421333260395256,0.340860645156116,0,1.06001872353102,0,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,0.11418387971906,0,0.593768556259299,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,1.54589062922275,1.93950101254089,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.243206428637567,0,0.219550115291051,0,0.210289948564127,0.102904612379284,2.97376904685418,1.32225283331772,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.823494773620054,1.25667604400135,0.397912944082302,0.19496408711912,1.79763881730844,2.59365659849633,0.398282546508734,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0,0,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.549122826376163,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,36.1899081454253,201.789008696741,0,0.275936746304732,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0,0,0.567760340833074,0,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,1.45740418314925,0.18542530201051,0.170870880797853,0.412773735926445,0.925972636848558,0.376736914009382,0.27338845544205,0,0.169978429993855,0.279902904647316,0,2.86401185404534,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0.337912250981556,0,0.2604087696879,0,0,0,0,0,0,0.649604114888975,0,0,0,0,0.100966449948148,0.228620419965,0.403304740547362,0.584747284438515,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr6:122527924..122527962,- | |||
}} |
Revision as of 08:47, 14 September 2013
Short description: | p@chr6:122527924..122527962, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:122527924..122527962, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.25e-16 | 4 |
myeloid leukocyte | 1.25e-16 | 4 |
phagocyte | 1.25e-16 | 4 |
monocyte | 1.25e-16 | 4 |
macrophage | 1.25e-16 | 4 |
tissue-resident macrophage | 1.25e-16 | 4 |
macrophage dendritic cell progenitor | 1.25e-16 | 4 |
monoblast | 1.25e-16 | 4 |
promonocyte | 1.25e-16 | 4 |
bone marrow cell | 4.54e-13 | 3 |
mesenchymal stem cell of the bone marrow | 4.54e-13 | 3 |
bone marrow macrophage | 1.25e-09 | 2 |
defensive cell | 1.48e-09 | 7 |
granulocyte monocyte progenitor cell | 1.48e-09 | 7 |
central nervous system macrophage | 1.13e-08 | 2 |
microglial cell | 1.13e-08 | 2 |
connective tissue cell | 3.68e-07 | 46 |
mesenchymal cell | 3.68e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.23e-13 | 22 |
skeletal element | 1.23e-13 | 22 |
skeletal system | 1.23e-13 | 22 |
bone marrow | 8.04e-12 | 16 |
musculoskeletal system | 6.24e-09 | 32 |
connective tissue | 3.68e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.