FFCP PHASE1:Mm9::chr6:127100681..127100694,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=997|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:127100681..127100694,-|id=chr6:127100681..127100694,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,1.47e-15,8;CL:0000128,8.01e-15,6;CL:0000126,8.01e-15,6;CL:0000127,8.01e-15,6;CL:0000333,2.47e-12,10;CL:0000095,2.47e-12,10;CL:0000243,2.47e-12,10;CL:0000123,2.47e-12,10;CL:0000125,2.47e-12,10;CL:0000030,2.47e-12,10;CL:0000339,2.47e-12,10;CL:0002609,6.27e-10,6;CL:0002319,1.15e-09,43;CL:0000221,2.15e-09,44;CL:0000133,2.15e-09,44;CL:0002605,4.00e-08,2;CL:0002604,4.00e-08,2;CL:0002321,3.01e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.42e-08,7;UBERON:0003022,1.42e-08,7;UBERON:0002421,1.42e-08,7;UBERON:0000349,1.42e-08,7;UBERON:0002600,1.42e-08,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,3.23814060948833,3.27690336850791,0.856089841127525,1.99430397488341,0.342401459862411,0.611942816932982,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,1.25896817975577,0.709638518536602,0.734187008646726,0.782391344348039,1.96222640742402,1.09843091367236,3.4997381833371,1.25987779462826,1.43752564364972,0,0.725362142011344,1.00828139742739,1.80081605225163,0,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.19840044207362,0.768436610643109,1.03689612308478,4.3201900266141,0.630974884054146,0.285650984403804,0,0.857435594504678,2.01275489138296,2.75765635983006,0,0,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0.852151612890289,0.779358013808606,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0.452167921657868,1.05829836422134,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.479260498023681,0.599902730993408,0.127070227073065,0,0,0.502617408451458,0,0.511430914660661,0.20778804455956,0,0.712875546952214,0,0,0,1.43132487258974,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0,0.862271971731369,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0,0.656669856316381,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0.77320476793256,0.605050573870028,0,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0.948339504765408,0.685491075658373,0,0.610953983535943,0,0.350679099451593,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0,0.292255857911312,0.395287777946524,0,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.656563598980245,0.582961673259701,0,0.170870880797853,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,0,0.216010681643603,0,0.655087691238533,0.404593039154462,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,1.03327858782185,0.675824501963113,1.05621514781179,0.781226309063701,0.419437377702843,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.399024873401031,0.853668028770671,0.972426868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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=997 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:127100681..127100694,- | |||
|id=chr6:127100681..127100694,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.47e-15,8;CL:0000128,8.01e-15,6;CL:0000126,8.01e-15,6;CL:0000127,8.01e-15,6;CL:0000333,2.47e-12,10;CL:0000095,2.47e-12,10;CL:0000243,2.47e-12,10;CL:0000123,2.47e-12,10;CL:0000125,2.47e-12,10;CL:0000030,2.47e-12,10;CL:0000339,2.47e-12,10;CL:0002609,6.27e-10,6;CL:0002319,1.15e-09,43;CL:0000221,2.15e-09,44;CL:0000133,2.15e-09,44;CL:0002605,4.00e-08,2;CL:0002604,4.00e-08,2;CL:0002321,3.01e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.42e-08,7;UBERON:0003022,1.42e-08,7;UBERON:0002421,1.42e-08,7;UBERON:0000349,1.42e-08,7;UBERON:0002600,1.42e-08,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,3.23814060948833,3.27690336850791,0.856089841127525,1.99430397488341,0.342401459862411,0.611942816932982,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,1.25896817975577,0.709638518536602,0.734187008646726,0.782391344348039,1.96222640742402,1.09843091367236,3.4997381833371,1.25987779462826,1.43752564364972,0,0.725362142011344,1.00828139742739,1.80081605225163,0,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.19840044207362,0.768436610643109,1.03689612308478,4.3201900266141,0.630974884054146,0.285650984403804,0,0.857435594504678,2.01275489138296,2.75765635983006,0,0,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0.852151612890289,0.779358013808606,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0.452167921657868,1.05829836422134,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.479260498023681,0.599902730993408,0.127070227073065,0,0,0.502617408451458,0,0.511430914660661,0.20778804455956,0,0.712875546952214,0,0,0,1.43132487258974,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0,0.862271971731369,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0,0.656669856316381,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0.77320476793256,0.605050573870028,0,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0.948339504765408,0.685491075658373,0,0.610953983535943,0,0.350679099451593,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0,0.292255857911312,0.395287777946524,0,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.656563598980245,0.582961673259701,0,0.170870880797853,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,0,0.216010681643603,0,0.655087691238533,0.404593039154462,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,1.03327858782185,0.675824501963113,1.05621514781179,0.781226309063701,0.419437377702843,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.399024873401031,0.853668028770671,0.972426868273176,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.685738504770831,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr6:127100681..127100694,- | |||
}} |
Revision as of 08:58, 14 September 2013
Short description: | p@chr6:127100681..127100694, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:127100681..127100694, - |
Coexpression cluster: | MCL_coexpression_mm9:997 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.47e-15 | 8 |
oligodendrocyte | 8.01e-15 | 6 |
macroglial cell | 8.01e-15 | 6 |
astrocyte | 8.01e-15 | 6 |
migratory neural crest cell | 2.47e-12 | 10 |
neuron associated cell | 2.47e-12 | 10 |
glial cell (sensu Vertebrata) | 2.47e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.47e-12 | 10 |
glial cell | 2.47e-12 | 10 |
glioblast | 2.47e-12 | 10 |
glioblast (sensu Vertebrata) | 2.47e-12 | 10 |
neuron of cerebral cortex | 6.27e-10 | 6 |
neural cell | 1.15e-09 | 43 |
ectodermal cell | 2.15e-09 | 44 |
neurectodermal cell | 2.15e-09 | 44 |
astrocyte of the cerebral cortex | 4.00e-08 | 2 |
astrocyte of the hippocampus | 4.00e-08 | 2 |
embryonic cell | 3.01e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.42e-08 | 7 |
lobe parts of cerebral cortex | 1.42e-08 | 7 |
hippocampal formation | 1.42e-08 | 7 |
limbic system | 1.42e-08 | 7 |
limbic lobe | 1.42e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.