FFCP PHASE1:Mm9::chr6:145255171..145255173,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:145255171..145255173,-|id=chr6:145255171..145255173,-|ontology_enrichment_celltype=CL:0000988!7.84e-12!32;CL:0002032!7.84e-12!32;CL:0000037!7.84e-12!32;CL:0000566!7.84e-12!32;CL:0000837!7.84e-12!32;CL:0000838!1.80e-09!12;CL:0002320!2.76e-09!46;CL:0000134!2.76e-09!46;CL:0002031!7.44e-09!25;CL:0000542!1.29e-08!13;CL:0000051!1.29e-08!13;CL:0000219!4.17e-08!54;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11|ontology_enrichment_celltype_v019_2=CL:0000838,2.15e-12,12;CL:0000542,1.96e-11,13;CL:0000051,1.96e-11,13;CL:0000791,9.14e-11,9;CL:0000789,9.14e-11,9;CL:0002420,9.14e-11,9;CL:0002419,9.14e-11,9;CL:0000790,9.14e-11,9;CL:0000084,7.60e-09,11;CL:0000827,7.60e-09,11;CL:0000738,1.01e-08,17;CL:0002087,1.01e-08,17;CL:0000988,1.95e-08,32;CL:0002032,1.95e-08,32;CL:0000037,1.95e-08,32;CL:0000837,1.95e-08,32;CL:0002031,3.10e-08,25;CL:0000945,1.59e-07,1;CL:0000236,1.59e-07,1;CL:0000826,1.59e-07,1;CL:0000625,2.11e-07,1;CL:0000034,3.22e-07,97;CL:0000624,3.84e-07,8|ontology_enrichment_disease=DOID:0060100!6.17e-07!3;DOID:4045!6.17e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.01e-18,3;DOID:4045,4.01e-18,3;DOID:0050686,2.35e-09,6|ontology_enrichment_uberon=UBERON:0002384!2.76e-09!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,1.68946466582,0,0.513653904676515,0,2.39681021903688,0,0,0,0.699561878128147,0.788655413395594,1.7824876368746,0.84877930359606,0,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,1.57057123192139,16.4704816648684,8.87959130445979,1.94204141212461,0,0,0,0,0,0,0,0,0,4.02678254538567,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.07833612055328,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,2.09927178485487,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr6:145255171..145255173,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:145255171..145255173,- | |||
|id=chr6:145255171..145255173,- | |||
|ontology_enrichment_celltype=CL:0000988!7.84e-12!32;CL:0002032!7.84e-12!32;CL:0000037!7.84e-12!32;CL:0000566!7.84e-12!32;CL:0000837!7.84e-12!32;CL:0000838!1.80e-09!12;CL:0002320!2.76e-09!46;CL:0000134!2.76e-09!46;CL:0002031!7.44e-09!25;CL:0000542!1.29e-08!13;CL:0000051!1.29e-08!13;CL:0000219!4.17e-08!54;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.15e-12,12;CL:0000542,1.96e-11,13;CL:0000051,1.96e-11,13;CL:0000791,9.14e-11,9;CL:0000789,9.14e-11,9;CL:0002420,9.14e-11,9;CL:0002419,9.14e-11,9;CL:0000790,9.14e-11,9;CL:0000084,7.60e-09,11;CL:0000827,7.60e-09,11;CL:0000738,1.01e-08,17;CL:0002087,1.01e-08,17;CL:0000988,1.95e-08,32;CL:0002032,1.95e-08,32;CL:0000037,1.95e-08,32;CL:0000837,1.95e-08,32;CL:0002031,3.10e-08,25;CL:0000945,1.59e-07,1;CL:0000236,1.59e-07,1;CL:0000826,1.59e-07,1;CL:0000625,2.11e-07,1;CL:0000034,3.22e-07,97;CL:0000624,3.84e-07,8 | |||
|ontology_enrichment_disease=DOID:0060100!6.17e-07!3;DOID:4045!6.17e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.01e-18,3;DOID:4045,4.01e-18,3;DOID:0050686,2.35e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.76e-09!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.68946466582,0,0.513653904676515,0,2.39681021903688,0,0,0,0.699561878128147,0.788655413395594,1.7824876368746,0.84877930359606,0,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,1.57057123192139,16.4704816648684,8.87959130445979,1.94204141212461,0,0,0,0,0,0,0,0,0,4.02678254538567,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.07833612055328,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,2.09927178485487,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr6:145255171..145255173,- | |||
}} |
Revision as of 09:21, 14 September 2013
Short description: | p@chr6:145255171..145255173, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:145255171..145255173, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.15e-12 | 12 |
lymphocyte | 1.96e-11 | 13 |
common lymphoid progenitor | 1.96e-11 | 13 |
mature alpha-beta T cell | 9.14e-11 | 9 |
alpha-beta T cell | 9.14e-11 | 9 |
immature T cell | 9.14e-11 | 9 |
mature T cell | 9.14e-11 | 9 |
immature alpha-beta T cell | 9.14e-11 | 9 |
T cell | 7.60e-09 | 11 |
pro-T cell | 7.60e-09 | 11 |
leukocyte | 1.01e-08 | 17 |
nongranular leukocyte | 1.01e-08 | 17 |
hematopoietic cell | 1.95e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.95e-08 | 32 |
hematopoietic stem cell | 1.95e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.95e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 3.10e-08 | 25 |
lymphocyte of B lineage | 1.59e-07 | 1 |
B cell | 1.59e-07 | 1 |
pro-B cell | 1.59e-07 | 1 |
CD8-positive, alpha-beta T cell | 2.11e-07 | 1 |
stem cell | 3.22e-07 | 97 |
CD4-positive, alpha-beta T cell | 3.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.01e-18 | 3 |
muscle cancer | 4.01e-18 | 3 |
organ system cancer | 2.35e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.