FFCP PHASE1:Mm9::chr6:82702729..82702733,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=397|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:82702729..82702733,-|id=chr6:82702729..82702733,-|ontology_enrichment_celltype=CL:0000239!3.57e-16!6;CL:0000677!3.57e-16!6;CL:0000212!3.57e-16!6;CL:0000584!3.57e-16!6;CL:0000066!6.98e-14!25;CL:0000075!7.80e-14!7;CL:0000473!2.33e-12!3;CL:0000627!2.33e-12!3;CL:0000682!2.33e-12!3;CL:0002563!1.04e-10!9;CL:0002251!1.04e-10!9;CL:0000223!1.14e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,4.37e-15,6;CL:0000677,4.37e-15,6;CL:0000584,4.37e-15,6;CL:0000682,8.96e-14,3;CL:0000075,4.95e-13,7;CL:0002563,2.78e-10,9;CL:0002251,2.78e-10,9;CL:0000066,8.74e-10,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.78e-25!15;UBERON:0001242!2.90e-18!13;UBERON:0000060!2.90e-18!13;UBERON:0001262!2.90e-18!13;UBERON:0004786!2.90e-18!13;UBERON:0004923!8.06e-15!24;UBERON:0000331!1.64e-12!3;UBERON:0002116!1.64e-12!3;UBERON:0001204!1.64e-12!3;UBERON:0001168!1.64e-12!3;UBERON:0002465!2.13e-12!3;UBERON:0003350!1.04e-10!9;UBERON:0004808!1.04e-10!9;UBERON:0001277!1.04e-10!9;UBERON:0001962!4.39e-09!2;UBERON:0001961!4.39e-09!2;UBERON:0001744!4.39e-09!2;UBERON:0000485!1.03e-08!11;UBERON:0000064!7.28e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-31,15;UBERON:0001962,1.59e-20,2;UBERON:0001961,1.59e-20,2;UBERON:0001744,1.59e-20,2;UBERON:0004923,7.89e-20,24;UBERON:0001242,5.70e-19,13;UBERON:0001262,5.70e-19,13;UBERON:0004786,5.70e-19,13;UBERON:0000331,2.32e-14,3;UBERON:0002116,2.32e-14,3;UBERON:0001204,2.32e-14,3;UBERON:0001168,2.32e-14,3;UBERON:0002465,4.93e-14,3;UBERON:0003199,2.31e-11,1;UBERON:0002108,5.15e-11,4;UBERON:0003350,2.78e-10,9;UBERON:0004808,2.78e-10,9;UBERON:0001277,2.78e-10,9;UBERON:0000485,1.59e-08,11;UBERON:0000160,4.76e-08,31|phase1_expression=0,5.23463111459042,5.0049916332849,0.60492842261366,0,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.15980299262857,7.34109699414944,0.57423196411502,5.1691439539089,2.58565479223067,7.60093677825496,0.252030129759931,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:82702729..82702733,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=397 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:82702729..82702733,- | |||
|id=chr6:82702729..82702733,- | |||
|ontology_enrichment_celltype=CL:0000239!3.57e-16!6;CL:0000677!3.57e-16!6;CL:0000212!3.57e-16!6;CL:0000584!3.57e-16!6;CL:0000066!6.98e-14!25;CL:0000075!7.80e-14!7;CL:0000473!2.33e-12!3;CL:0000627!2.33e-12!3;CL:0000682!2.33e-12!3;CL:0002563!1.04e-10!9;CL:0002251!1.04e-10!9;CL:0000223!1.14e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.37e-15,6;CL:0000677,4.37e-15,6;CL:0000584,4.37e-15,6;CL:0000682,8.96e-14,3;CL:0000075,4.95e-13,7;CL:0002563,2.78e-10,9;CL:0002251,2.78e-10,9;CL:0000066,8.74e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.78e-25!15;UBERON:0001242!2.90e-18!13;UBERON:0000060!2.90e-18!13;UBERON:0001262!2.90e-18!13;UBERON:0004786!2.90e-18!13;UBERON:0004923!8.06e-15!24;UBERON:0000331!1.64e-12!3;UBERON:0002116!1.64e-12!3;UBERON:0001204!1.64e-12!3;UBERON:0001168!1.64e-12!3;UBERON:0002465!2.13e-12!3;UBERON:0003350!1.04e-10!9;UBERON:0004808!1.04e-10!9;UBERON:0001277!1.04e-10!9;UBERON:0001962!4.39e-09!2;UBERON:0001961!4.39e-09!2;UBERON:0001744!4.39e-09!2;UBERON:0000485!1.03e-08!11;UBERON:0000064!7.28e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-31,15;UBERON:0001962,1.59e-20,2;UBERON:0001961,1.59e-20,2;UBERON:0001744,1.59e-20,2;UBERON:0004923,7.89e-20,24;UBERON:0001242,5.70e-19,13;UBERON:0001262,5.70e-19,13;UBERON:0004786,5.70e-19,13;UBERON:0000331,2.32e-14,3;UBERON:0002116,2.32e-14,3;UBERON:0001204,2.32e-14,3;UBERON:0001168,2.32e-14,3;UBERON:0002465,4.93e-14,3;UBERON:0003199,2.31e-11,1;UBERON:0002108,5.15e-11,4;UBERON:0003350,2.78e-10,9;UBERON:0004808,2.78e-10,9;UBERON:0001277,2.78e-10,9;UBERON:0000485,1.59e-08,11;UBERON:0000160,4.76e-08,31 | |||
|phase1_expression=0,5.23463111459042,5.0049916332849,0.60492842261366,0,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.15980299262857,7.34109699414944,0.57423196411502,5.1691439539089,2.58565479223067,7.60093677825496,0.252030129759931,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:82702729..82702733,- | |||
}} |
Revision as of 10:42, 14 September 2013
Short description: | p@chr6:82702729..82702733, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:82702729..82702733, - |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.37e-15 | 6 |
gut absorptive cell | 4.37e-15 | 6 |
enterocyte | 4.37e-15 | 6 |
M cell of gut | 8.96e-14 | 3 |
columnar/cuboidal epithelial cell | 4.95e-13 | 7 |
intestinal epithelial cell | 2.78e-10 | 9 |
epithelial cell of alimentary canal | 2.78e-10 | 9 |
epithelial cell | 8.74e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.02e-31 | 15 |
gut-associated lymphoid tissue | 1.59e-20 | 2 |
mucosa-associated lymphoid tissue | 1.59e-20 | 2 |
lymphoid tissue | 1.59e-20 | 2 |
organ component layer | 7.89e-20 | 24 |
intestinal mucosa | 5.70e-19 | 13 |
wall of intestine | 5.70e-19 | 13 |
gastrointestinal system mucosa | 5.70e-19 | 13 |
ileal mucosa | 2.32e-14 | 3 |
ileum | 2.32e-14 | 3 |
mucosa of small intestine | 2.32e-14 | 3 |
wall of small intestine | 2.32e-14 | 3 |
lymphoid system | 4.93e-14 | 3 |
egg chamber | 2.31e-11 | 1 |
small intestine | 5.15e-11 | 4 |
epithelium of mucosa | 2.78e-10 | 9 |
gastrointestinal system epithelium | 2.78e-10 | 9 |
intestinal epithelium | 2.78e-10 | 9 |
simple columnar epithelium | 1.59e-08 | 11 |
intestine | 4.76e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.