FFCP PHASE1:Mm9::chr7:130565024..130565035,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30949|HGNC=|MCL_coexpression_id=256|UniProt=|association_with_transcript=-16bp_to_uc009jpq.1_5end|description=CAGE_peak_2_at_Lcmt1_5end|id=chr7:130565024..130565035,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001264!1.76e-45!12;UBERON:0003922!1.76e-45!12;UBERON:0002114!1.76e-45!12;UBERON:0003923!1.76e-45!12;UBERON:0003924!1.76e-45!12;UBERON:0003921!1.76e-45!12;UBERON:0001045!8.06e-42!13;UBERON:0002108!1.40e-33!16;UBERON:0002075!1.50e-32!19;UBERON:0005409!2.43e-22!59;UBERON:0000160!3.43e-20!43;UBERON:0002323!3.96e-18!37;UBERON:0004458!3.96e-18!37;UBERON:0003886!1.39e-17!38;UBERON:0002553!4.59e-17!39;UBERON:0000464!7.70e-11!57;UBERON:0004921!1.51e-08!126;UBERON:0004185!1.51e-08!126;UBERON:0001007!2.35e-08!128;UBERON:0001555!2.35e-08!128;UBERON:0007026!2.35e-08!128;UBERON:0004119!3.61e-08!130;UBERON:0000925!3.61e-08!130;UBERON:0006595!3.61e-08!130;UBERON:0001041!1.02e-07!92;UBERON:0000077!3.66e-07!97;UBERON:0000466!4.38e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.62e-72,12;UBERON:0002075,1.55e-45,19;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000949,9.68e-12,72;UBERON:0005177,1.18e-10,79;UBERON:0002100,2.78e-09,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30980553359851,0.485561272309963,1.51161778482376,8.29862350925952,8.56375489354241,4.91896236710284,1.80899805217755,0.727067458955011,1.42598951353889,1.58018378967908,7.37930260024991,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p2@Lcmt1}} | ||
|EntrezGene=30949 | |||
|HGNC= | |||
|MCL_coexpression_id=256 | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_uc009jpq.1_5end | |||
|description=CAGE_peak_2_at_Lcmt1_5end | |||
|id=chr7:130565024..130565035,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001264!1.76e-45!12;UBERON:0003922!1.76e-45!12;UBERON:0002114!1.76e-45!12;UBERON:0003923!1.76e-45!12;UBERON:0003924!1.76e-45!12;UBERON:0003921!1.76e-45!12;UBERON:0001045!8.06e-42!13;UBERON:0002108!1.40e-33!16;UBERON:0002075!1.50e-32!19;UBERON:0005409!2.43e-22!59;UBERON:0000160!3.43e-20!43;UBERON:0002323!3.96e-18!37;UBERON:0004458!3.96e-18!37;UBERON:0003886!1.39e-17!38;UBERON:0002553!4.59e-17!39;UBERON:0000464!7.70e-11!57;UBERON:0004921!1.51e-08!126;UBERON:0004185!1.51e-08!126;UBERON:0001007!2.35e-08!128;UBERON:0001555!2.35e-08!128;UBERON:0007026!2.35e-08!128;UBERON:0004119!3.61e-08!130;UBERON:0000925!3.61e-08!130;UBERON:0006595!3.61e-08!130;UBERON:0001041!1.02e-07!92;UBERON:0000077!3.66e-07!97;UBERON:0000466!4.38e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.62e-72,12;UBERON:0002075,1.55e-45,19;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000949,9.68e-12,72;UBERON:0005177,1.18e-10,79;UBERON:0002100,2.78e-09,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30980553359851,0.485561272309963,1.51161778482376,8.29862350925952,8.56375489354241,4.91896236710284,1.80899805217755,0.727067458955011,1.42598951353889,1.58018378967908,7.37930260024991,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p2@Lcmt1 | |||
}} |
Revision as of 11:42, 14 September 2013
Short description: | p2@Lcmt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lcmt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:256 |
Association with transcript: | -16bp_to_uc009jpq.1_5end |
EntrezGene: | Lcmt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 3.62e-72 | 12 |
viscus | 1.55e-45 | 19 |
body cavity | 2.95e-23 | 37 |
body cavity or lining | 2.95e-23 | 37 |
body cavity precursor | 1.23e-22 | 38 |
anatomical cavity | 4.79e-22 | 39 |
endocrine system | 9.68e-12 | 72 |
trunk region element | 1.18e-10 | 79 |
trunk | 2.78e-09 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.