FFCP PHASE1:Hg19::chrX:55115467..55115475,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=203569|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31804|TSSclassifier=S|UniProt=|association_with_transcript=-9bp_to_ENST00000374965_5end|coexpression_cluster_id=C312|description=CAGE_peak_2_at_PAGE2_5end|id=chrX:55115467..55115475,+|ontology_enrichment_celltype=CL:0000319!6.82e-13!1;CL:1000415!2.15e-07!2;CL:0000054!3.93e-07!2;CL:0000137!3.93e-07!2;CL:0000092!3.93e-07!2;CL:0000159!4.42e-07!2|ontology_enrichment_celltype_v019=CL:1000415;5.48e-18;2|ontology_enrichment_celltype_v019_2=CL:1000415,5.48e-18,2|ontology_enrichment_development_v019=UBERON:0007123;6.78e-08;5|ontology_enrichment_disease=DOID:3030!6.82e-13!1;DOID:201!8.91e-09!6;DOID:0060100!8.91e-09!6;DOID:4231!3.09e-07!2;DOID:1907!3.09e-07!2;DOID:200!3.93e-07!2;DOID:4305!3.93e-07!2|ontology_enrichment_disease_v019=DOID:5093;1.50e-09;4!DOID:1612;1.50e-09;4|ontology_enrichment_disease_v019_2=DOID:5093,1.57e-09,4;DOID:1612,1.57e-09,4|ontology_enrichment_uberon=UBERON:0001282!1.82e-13!1;UBERON:0009842!1.82e-13!1;UBERON:0003704!1.82e-13!1;UBERON:0001171!1.82e-13!1;UBERON:0001172!1.82e-13!1;UBERON:0002294!7.30e-08!7;UBERON:0001173!7.30e-08!7;UBERON:0004912!7.30e-08!7;UBERON:0000473!7.22e-07!8|ontology_enrichment_uberon_v019=UBERON:0001282;2.58e-34;1!UBERON:0009842;2.58e-34;1!UBERON:0003704;2.58e-34;1!UBERON:0001171;2.58e-34;1!UBERON:0001172;2.58e-34;1!UBERON:0002294;5.35e-20;7!UBERON:0001173;5.35e-20;7!UBERON:0002110;1.85e-12;3!UBERON:0001280;2.07e-12;3!UBERON:0004647;2.07e-12;3!UBERON:0002394;1.22e-09;4!UBERON:0003928;1.22e-09;4!UBERON:0002046;6.78e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.58e-34,1;UBERON:0009842,2.58e-34,1;UBERON:0003704,2.58e-34,1;UBERON:0001171,2.58e-34,1;UBERON:0001172,2.58e-34,1;UBERON:0002294,8.39e-16,9;UBERON:0001173,8.39e-16,9;UBERON:0004912,8.39e-16,9;UBERON:0002110,1.85e-12,3;UBERON:0006242,1.85e-12,3;UBERON:0001280,2.07e-12,3;UBERON:0004647,2.07e-12,3;UBERON:0005171,2.07e-12,3;UBERON:0002046,6.13e-08,5;UBERON:0004117,6.13e-08,5;UBERON:0007689,6.13e-08,5;UBERON:0007123,6.13e-08,5;UBERON:0003091,6.13e-08,5;UBERON:0002394,7.58e-07,6;UBERON:0003928,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53220373125704,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0198525314417,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,1.33982065078089,0,0,0,0,0,0,1.6819779387092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@PAGE2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=203569 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31804 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000374965_5end | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_2_at_PAGE2_5end | |||
|id=chrX:55115467..55115475,+ | |||
|ontology_enrichment_celltype=CL:0000319!6.82e-13!1;CL:1000415!2.15e-07!2;CL:0000054!3.93e-07!2;CL:0000137!3.93e-07!2;CL:0000092!3.93e-07!2;CL:0000159!4.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;5.48e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.48e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.78e-08;5 | |||
|ontology_enrichment_disease=DOID:3030!6.82e-13!1;DOID:201!8.91e-09!6;DOID:0060100!8.91e-09!6;DOID:4231!3.09e-07!2;DOID:1907!3.09e-07!2;DOID:200!3.93e-07!2;DOID:4305!3.93e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.50e-09;4!DOID:1612;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.57e-09,4;DOID:1612,1.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.82e-13!1;UBERON:0009842!1.82e-13!1;UBERON:0003704!1.82e-13!1;UBERON:0001171!1.82e-13!1;UBERON:0001172!1.82e-13!1;UBERON:0002294!7.30e-08!7;UBERON:0001173!7.30e-08!7;UBERON:0004912!7.30e-08!7;UBERON:0000473!7.22e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.58e-34;1!UBERON:0009842;2.58e-34;1!UBERON:0003704;2.58e-34;1!UBERON:0001171;2.58e-34;1!UBERON:0001172;2.58e-34;1!UBERON:0002294;5.35e-20;7!UBERON:0001173;5.35e-20;7!UBERON:0002110;1.85e-12;3!UBERON:0001280;2.07e-12;3!UBERON:0004647;2.07e-12;3!UBERON:0002394;1.22e-09;4!UBERON:0003928;1.22e-09;4!UBERON:0002046;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.58e-34,1;UBERON:0009842,2.58e-34,1;UBERON:0003704,2.58e-34,1;UBERON:0001171,2.58e-34,1;UBERON:0001172,2.58e-34,1;UBERON:0002294,8.39e-16,9;UBERON:0001173,8.39e-16,9;UBERON:0004912,8.39e-16,9;UBERON:0002110,1.85e-12,3;UBERON:0006242,1.85e-12,3;UBERON:0001280,2.07e-12,3;UBERON:0004647,2.07e-12,3;UBERON:0005171,2.07e-12,3;UBERON:0002046,6.13e-08,5;UBERON:0004117,6.13e-08,5;UBERON:0007689,6.13e-08,5;UBERON:0007123,6.13e-08,5;UBERON:0003091,6.13e-08,5;UBERON:0002394,7.58e-07,6;UBERON:0003928,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53220373125704,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0198525314417,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,1.33982065078089,0,0,0,0,0,0,1.6819779387092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PAGE2 | |||
}} |
Revision as of 12:16, 14 September 2013
Short description: | p2@PAGE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PAGE2_5end |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | -9bp_to_ENST00000374965_5end |
EntrezGene: | PAGE2 |
HGNC: | 31804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.58e-34 | 1 |
acinus | 2.58e-34 | 1 |
intrahepatic bile duct | 2.58e-34 | 1 |
portal lobule | 2.58e-34 | 1 |
hepatic acinus | 2.58e-34 | 1 |
biliary system | 8.39e-16 | 9 |
biliary tree | 8.39e-16 | 9 |
biliary bud | 8.39e-16 | 9 |
gallbladder | 1.85e-12 | 3 |
gall bladder primordium | 1.85e-12 | 3 |
liver parenchyma | 2.07e-12 | 3 |
liver lobule | 2.07e-12 | 3 |
hepatic duct | 2.07e-12 | 3 |
thyroid gland | 6.13e-08 | 5 |
pharyngeal pouch | 6.13e-08 | 5 |
thyroid diverticulum | 6.13e-08 | 5 |
pharyngeal pouch 2 | 6.13e-08 | 5 |
thyroid primordium | 6.13e-08 | 5 |
bile duct | 7.58e-07 | 6 |
digestive system duct | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.57e-09 | 4 |
breast cancer | 1.57e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.