FFCP PHASE1:Mm9::chr7:26601699..26601742,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74134|HGNC=|MCL_coexpression_id=468|UniProt=Q9DBX6|association_with_transcript=-27bp_to_ENSMUST00000043314_5end|description=CAGE_peak_3_at_Cyp2s1_5end|id=chr7:26601699..26601742,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.47e-10,9;CL:0002251,4.47e-10,9;CL:0000239,4.65e-08,6;CL:0000677,4.65e-08,6;CL:0000584,4.65e-08,6;CL:0000075,9.98e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.53e-14!59;UBERON:0000160!4.05e-12!43;UBERON:0000344!2.87e-10!15;UBERON:0001242!4.44e-09!13;UBERON:0000060!4.44e-09!13;UBERON:0001262!4.44e-09!13;UBERON:0004786!4.44e-09!13;UBERON:0004119!8.00e-09!130;UBERON:0000925!8.00e-09!130;UBERON:0006595!8.00e-09!130;UBERON:0001007!2.52e-08!128;UBERON:0001555!2.52e-08!128;UBERON:0007026!2.52e-08!128;UBERON:0004921!1.44e-07!126;UBERON:0004185!1.44e-07!126;UBERON:0007023!6.28e-07!51;UBERON:0004923!6.84e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.35e-32,47;UBERON:0000160,1.95e-29,31;UBERON:0004119,5.43e-18,118;UBERON:0000925,5.43e-18,118;UBERON:0006595,5.43e-18,118;UBERON:0001007,1.39e-17,116;UBERON:0001555,1.39e-17,116;UBERON:0007026,1.39e-17,116;UBERON:0000344,9.13e-17,15;UBERON:0004921,4.78e-16,114;UBERON:0001242,1.09e-14,13;UBERON:0001262,1.09e-14,13;UBERON:0004786,1.09e-14,13;UBERON:0004923,8.73e-12,24;UBERON:0003350,4.47e-10,9;UBERON:0004808,4.47e-10,9;UBERON:0001277,4.47e-10,9;UBERON:0000485,7.95e-08,11;UBERON:0007023,1.09e-07,51|phase1_expression=0,7.32848356042658,5.91499011206397,18.7527811010235,20.0358291978539,3.52546471014969,3.27057696833736,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,5.43974237497583,5.04700418347774,3.44539178469012,6.46142994238612,2.58565479223067,15.771943814879,10.0812051903972,3.32595765982957,0,0,0,2.88851619751275,1.16364251750945,2.6542016314108,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,1.38245879930619,0.131886287730194,0.0914876436024097,0,1.67509799400829,0.56276261003168,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0,3.47837386442013,0,0,0,0,0,2.10666630197628,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,2.16949371466214,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,22.7419370315624,1.15679485535929,0,0,0,0,5.59175283654366,0.292780797011547,0.628340120440365,16.0937944781413,0,0,0,0.748953197024114,0.457500602818626,0.251308704225729,0.173824320192276,0,1.24672826735736,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,1.26265113531884,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.210289948564127,0.205809224758569,36.015647345234,10.3135720998782,0.213288250535234,0.232236671860439,1.9330119198314,5.24377164020691,5.11469500843202,6.46767128782701,13.2868137232463,4.6115707322723,2.26201687920243,4.57599885694647,2.14460495831032,13.4822911298133,9.29393614461185,12.7450414882795,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,0.387904974335251,1.26244475802573,2.08680572510049,1.91893192373483,2.04098346193787,3.20832626196681,0.296452627087149,0,0,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0.179397413521912,0,5.91210208533135,0.189491411770485,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,1.19021820443007,1.36593553500459,0.945810864637146,1.10732344824387,1.75400245523236,1.96635977658886,1.72684981865896,1.59113964439663,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,2.98074178937364,0.890328018336276,0.325773918707152,3.46437258242324,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.55056975900933,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0.214337035031592,0.709360934569094,0.535106452806212,0.658196082408484,2.13125464380219,0.469343416127421,2.96564899209348,0.220528398054962,0.65954501176592,0,0.241251699712623,0.238744688006273,0.164140899745061,11.0762717919343,0.370850604021019,0,0,0.370389054739423,0,0,0,0,0,0,31.5041303944987,0.158167996790568,2.23651413839534,2.37611749807963,4.59994251231831,5.24070152990826,6.06889558731693,9.75310777558964,12.0407733312654,5.31421390496351,4.34937519160848,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,4.0811469050738,0,0,0,5.02292944483695,2.25218970541418,2.74727436400898,2.14368379079066,0.501572104035363,0,0.460325236507177,0,0.17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| ||
|EntrezGene=74134 | |||
|HGNC= | |||
|MCL_coexpression_id=468 | |||
|UniProt=Q9DBX6 | |||
|association_with_transcript=-27bp_to_ENSMUST00000043314_5end | |||
|description=CAGE_peak_3_at_Cyp2s1_5end | |||
|id=chr7:26601699..26601742,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.47e-10,9;CL:0002251,4.47e-10,9;CL:0000239,4.65e-08,6;CL:0000677,4.65e-08,6;CL:0000584,4.65e-08,6;CL:0000075,9.98e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.53e-14!59;UBERON:0000160!4.05e-12!43;UBERON:0000344!2.87e-10!15;UBERON:0001242!4.44e-09!13;UBERON:0000060!4.44e-09!13;UBERON:0001262!4.44e-09!13;UBERON:0004786!4.44e-09!13;UBERON:0004119!8.00e-09!130;UBERON:0000925!8.00e-09!130;UBERON:0006595!8.00e-09!130;UBERON:0001007!2.52e-08!128;UBERON:0001555!2.52e-08!128;UBERON:0007026!2.52e-08!128;UBERON:0004921!1.44e-07!126;UBERON:0004185!1.44e-07!126;UBERON:0007023!6.28e-07!51;UBERON:0004923!6.84e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.35e-32,47;UBERON:0000160,1.95e-29,31;UBERON:0004119,5.43e-18,118;UBERON:0000925,5.43e-18,118;UBERON:0006595,5.43e-18,118;UBERON:0001007,1.39e-17,116;UBERON:0001555,1.39e-17,116;UBERON:0007026,1.39e-17,116;UBERON:0000344,9.13e-17,15;UBERON:0004921,4.78e-16,114;UBERON:0001242,1.09e-14,13;UBERON:0001262,1.09e-14,13;UBERON:0004786,1.09e-14,13;UBERON:0004923,8.73e-12,24;UBERON:0003350,4.47e-10,9;UBERON:0004808,4.47e-10,9;UBERON:0001277,4.47e-10,9;UBERON:0000485,7.95e-08,11;UBERON:0007023,1.09e-07,51 | |||
|phase1_expression=0,7.32848356042658,5.91499011206397,18.7527811010235,20.0358291978539,3.52546471014969,3.27057696833736,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,5.43974237497583,5.04700418347774,3.44539178469012,6.46142994238612,2.58565479223067,15.771943814879,10.0812051903972,3.32595765982957,0,0,0,2.88851619751275,1.16364251750945,2.6542016314108,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,1.38245879930619,0.131886287730194,0.0914876436024097,0,1.67509799400829,0.56276261003168,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0,3.47837386442013,0,0,0,0,0,2.10666630197628,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,2.16949371466214,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,22.7419370315624,1.15679485535929,0,0,0,0,5.59175283654366,0.292780797011547,0.628340120440365,16.0937944781413,0,0,0,0.748953197024114,0.457500602818626,0.251308704225729,0.173824320192276,0,1.24672826735736,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,1.26265113531884,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.210289948564127,0.205809224758569,36.015647345234,10.3135720998782,0.213288250535234,0.232236671860439,1.9330119198314,5.24377164020691,5.11469500843202,6.46767128782701,13.2868137232463,4.6115707322723,2.26201687920243,4.57599885694647,2.14460495831032,13.4822911298133,9.29393614461185,12.7450414882795,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,0.387904974335251,1.26244475802573,2.08680572510049,1.91893192373483,2.04098346193787,3.20832626196681,0.296452627087149,0,0,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0.179397413521912,0,5.91210208533135,0.189491411770485,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,1.19021820443007,1.36593553500459,0.945810864637146,1.10732344824387,1.75400245523236,1.96635977658886,1.72684981865896,1.59113964439663,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,2.98074178937364,0.890328018336276,0.325773918707152,3.46437258242324,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.55056975900933,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0.214337035031592,0.709360934569094,0.535106452806212,0.658196082408484,2.13125464380219,0.469343416127421,2.96564899209348,0.220528398054962,0.65954501176592,0,0.241251699712623,0.238744688006273,0.164140899745061,11.0762717919343,0.370850604021019,0,0,0.370389054739423,0,0,0,0,0,0,31.5041303944987,0.158167996790568,2.23651413839534,2.37611749807963,4.59994251231831,5.24070152990826,6.06889558731693,9.75310777558964,12.0407733312654,5.31421390496351,4.34937519160848,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,4.0811469050738,0,0,0,5.02292944483695,2.25218970541418,2.74727436400898,2.14368379079066,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0.962757628775446,0.758091635291392,0.25347929989024,0.377252682772152,0.842773567228942,0.704276676453562,0.459483751644906,0.476293691283074,0.695305955669133,0.578727661391115,0,0.147198920134397,0,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.25384382367503,0.365855945745545,0,0.543216455383447,0,0.474540072496697,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0.499621155875892,1.87145286756327,1.07435527024149,0,0,0 | |||
|short_description=p3@Cyp2s1 | |||
}} |
Revision as of 12:56, 14 September 2013
Short description: | p3@Cyp2s1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp2s1_5end |
Coexpression cluster: | MCL_coexpression_mm9:468 |
Association with transcript: | -27bp_to_ENSMUST00000043314_5end |
EntrezGene: | Cyp2s1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.47e-10 | 9 |
epithelial cell of alimentary canal | 4.47e-10 | 9 |
brush border epithelial cell | 4.65e-08 | 6 |
gut absorptive cell | 4.65e-08 | 6 |
enterocyte | 4.65e-08 | 6 |
columnar/cuboidal epithelial cell | 9.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.35e-32 | 47 |
intestine | 1.95e-29 | 31 |
endoderm-derived structure | 5.43e-18 | 118 |
endoderm | 5.43e-18 | 118 |
presumptive endoderm | 5.43e-18 | 118 |
digestive system | 1.39e-17 | 116 |
digestive tract | 1.39e-17 | 116 |
primitive gut | 1.39e-17 | 116 |
mucosa | 9.13e-17 | 15 |
subdivision of digestive tract | 4.78e-16 | 114 |
intestinal mucosa | 1.09e-14 | 13 |
wall of intestine | 1.09e-14 | 13 |
gastrointestinal system mucosa | 1.09e-14 | 13 |
organ component layer | 8.73e-12 | 24 |
epithelium of mucosa | 4.47e-10 | 9 |
gastrointestinal system epithelium | 4.47e-10 | 9 |
intestinal epithelium | 4.47e-10 | 9 |
simple columnar epithelium | 7.95e-08 | 11 |
adult organism | 1.09e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.