FFCP PHASE1:Mm9::chr7:86985789..86985803,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86985789..86985803,-|id=chr7:86985789..86985803,-|ontology_enrichment_celltype=CL:0000239!2.82e-10!6;CL:0000677!2.82e-10!6;CL:0000212!2.82e-10!6;CL:0000584!2.82e-10!6;CL:0000075!1.15e-08!7|ontology_enrichment_celltype_v019_2=CL:0000682,4.02e-14,3;CL:0000239,6.89e-12,6;CL:0000677,6.89e-12,6;CL:0000584,6.89e-12,6;CL:0000473,1.43e-10,7;CL:0000075,3.29e-10,7;CL:0002563,5.79e-08,9;CL:0002251,5.79e-08,9;CL:0000066,6.63e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.87e-18!43;UBERON:0000344!4.49e-15!15;UBERON:0005409!1.94e-12!59;UBERON:0001242!3.11e-12!13;UBERON:0000060!3.11e-12!13;UBERON:0001262!3.11e-12!13;UBERON:0004786!3.11e-12!13;UBERON:0004923!3.21e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.18e-27,15;UBERON:0000160,4.14e-21,31;UBERON:0001242,2.14e-20,13;UBERON:0001262,2.14e-20,13;UBERON:0004786,2.14e-20,13;UBERON:0004923,2.55e-16,24;UBERON:0000331,6.61e-14,3;UBERON:0002116,6.61e-14,3;UBERON:0001204,6.61e-14,3;UBERON:0001168,6.61e-14,3;UBERON:0005409,3.47e-13,47;UBERON:0002108,1.48e-10,4;UBERON:0001962,5.22e-09,2;UBERON:0001961,5.22e-09,2;UBERON:0001744,5.22e-09,2;UBERON:0003350,5.79e-08,9;UBERON:0004808,5.79e-08,9;UBERON:0001277,5.79e-08,9|phase1_expression=0,3.83872948403297,2.27499619694768,1.51232105653415,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.37645568640302,9.18771142584032,3.4460959692726,2.15471232685889,8.36103045608045,6.30075324399827,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0,0.128867461322093,0,0.22237804384487,0,2.84717436926707,0.494096864172033,0.251335208800269,0,0,1.79763881730844,1.08069024937347,0.398282546508734,0,0,1.1270773567308,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:86985789..86985803,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86985789..86985803,- | |||
|id=chr7:86985789..86985803,- | |||
|ontology_enrichment_celltype=CL:0000239!2.82e-10!6;CL:0000677!2.82e-10!6;CL:0000212!2.82e-10!6;CL:0000584!2.82e-10!6;CL:0000075!1.15e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.02e-14,3;CL:0000239,6.89e-12,6;CL:0000677,6.89e-12,6;CL:0000584,6.89e-12,6;CL:0000473,1.43e-10,7;CL:0000075,3.29e-10,7;CL:0002563,5.79e-08,9;CL:0002251,5.79e-08,9;CL:0000066,6.63e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.87e-18!43;UBERON:0000344!4.49e-15!15;UBERON:0005409!1.94e-12!59;UBERON:0001242!3.11e-12!13;UBERON:0000060!3.11e-12!13;UBERON:0001262!3.11e-12!13;UBERON:0004786!3.11e-12!13;UBERON:0004923!3.21e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.18e-27,15;UBERON:0000160,4.14e-21,31;UBERON:0001242,2.14e-20,13;UBERON:0001262,2.14e-20,13;UBERON:0004786,2.14e-20,13;UBERON:0004923,2.55e-16,24;UBERON:0000331,6.61e-14,3;UBERON:0002116,6.61e-14,3;UBERON:0001204,6.61e-14,3;UBERON:0001168,6.61e-14,3;UBERON:0005409,3.47e-13,47;UBERON:0002108,1.48e-10,4;UBERON:0001962,5.22e-09,2;UBERON:0001961,5.22e-09,2;UBERON:0001744,5.22e-09,2;UBERON:0003350,5.79e-08,9;UBERON:0004808,5.79e-08,9;UBERON:0001277,5.79e-08,9 | |||
|phase1_expression=0,3.83872948403297,2.27499619694768,1.51232105653415,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.37645568640302,9.18771142584032,3.4460959692726,2.15471232685889,8.36103045608045,6.30075324399827,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0,0.128867461322093,0,0.22237804384487,0,2.84717436926707,0.494096864172033,0.251335208800269,0,0,1.79763881730844,1.08069024937347,0.398282546508734,0,0,1.1270773567308,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:86985789..86985803,- | |||
}} |
Revision as of 14:17, 14 September 2013
Short description: | p@chr7:86985789..86985803, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86985789..86985803, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.02e-14 | 3 |
brush border epithelial cell | 6.89e-12 | 6 |
gut absorptive cell | 6.89e-12 | 6 |
enterocyte | 6.89e-12 | 6 |
defensive cell | 1.43e-10 | 7 |
columnar/cuboidal epithelial cell | 3.29e-10 | 7 |
intestinal epithelial cell | 5.79e-08 | 9 |
epithelial cell of alimentary canal | 5.79e-08 | 9 |
epithelial cell | 6.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.18e-27 | 15 |
intestine | 4.14e-21 | 31 |
intestinal mucosa | 2.14e-20 | 13 |
wall of intestine | 2.14e-20 | 13 |
gastrointestinal system mucosa | 2.14e-20 | 13 |
organ component layer | 2.55e-16 | 24 |
ileal mucosa | 6.61e-14 | 3 |
ileum | 6.61e-14 | 3 |
mucosa of small intestine | 6.61e-14 | 3 |
wall of small intestine | 6.61e-14 | 3 |
gastrointestinal system | 3.47e-13 | 47 |
small intestine | 1.48e-10 | 4 |
gut-associated lymphoid tissue | 5.22e-09 | 2 |
mucosa-associated lymphoid tissue | 5.22e-09 | 2 |
lymphoid tissue | 5.22e-09 | 2 |
epithelium of mucosa | 5.79e-08 | 9 |
gastrointestinal system epithelium | 5.79e-08 | 9 |
intestinal epithelium | 5.79e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.