FFCP PHASE1:Mm9::chr7:87924201..87924216,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:87924201..87924216,-|id=chr7:87924201..87924216,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000355,4.59e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.44e-08,1;UBERON:0001097,2.44e-08,1;UBERON:0003968,2.44e-08,1;UBERON:0001467,2.44e-08,1;UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002204,4.66e-08,32;UBERON:0000383,2.61e-07,10|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0.630924330716475,0.411343300817216,2.12194825899015,0.255129870453209,0.496454756004426,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,2.92972141515835,3.906676722619,2.61761871986899,16.4704816648684,6.14740936462601,2.91306211818692,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,1.55759661857696,0,0.762421362438388,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0,0.195133647857799,0.630540576424764,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.567760340833074,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0.169978429993855,0.979660166265606,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.228620419965,0.302478555410522,0.292373642219257,0.192423683280659,0.584384510907845,0,0,0,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:87924201..87924216,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:87924201..87924216,- | |||
|id=chr7:87924201..87924216,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000355,4.59e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.44e-08,1;UBERON:0001097,2.44e-08,1;UBERON:0003968,2.44e-08,1;UBERON:0001467,2.44e-08,1;UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002204,4.66e-08,32;UBERON:0000383,2.61e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0.630924330716475,0.411343300817216,2.12194825899015,0.255129870453209,0.496454756004426,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,2.92972141515835,3.906676722619,2.61761871986899,16.4704816648684,6.14740936462601,2.91306211818692,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,1.55759661857696,0,0.762421362438388,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0,0.195133647857799,0.630540576424764,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.567760340833074,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0.169978429993855,0.979660166265606,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.228620419965,0.302478555410522,0.292373642219257,0.192423683280659,0.584384510907845,0,0,0,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:87924201..87924216,- | |||
}} |
Revision as of 14:19, 14 September 2013
Short description: | p@chr7:87924201..87924216, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:87924201..87924216, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.06e-08 | 1 |
B cell | 2.06e-08 | 1 |
pro-B cell | 2.06e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.44e-08 | 1 |
axillary lymph node | 2.44e-08 | 1 |
peripheral lymph node | 2.44e-08 | 1 |
shoulder | 2.44e-08 | 1 |
skeletal muscle tissue | 4.59e-08 | 9 |
striated muscle tissue | 4.59e-08 | 9 |
muscle tissue | 4.59e-08 | 9 |
multilaminar epithelium | 4.59e-08 | 9 |
epithelial vesicle | 4.59e-08 | 9 |
musculature | 4.59e-08 | 9 |
somite | 4.59e-08 | 9 |
myotome | 4.59e-08 | 9 |
presomitic mesoderm | 4.59e-08 | 9 |
presumptive segmental plate | 4.59e-08 | 9 |
dermomyotome | 4.59e-08 | 9 |
trunk paraxial mesoderm | 4.59e-08 | 9 |
musculoskeletal system | 4.66e-08 | 32 |
musculature of body | 2.61e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.59e-23 | 3 |
muscle cancer | 5.59e-23 | 3 |
organ system cancer | 8.07e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.