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FFCP PHASE1:Mm9::chr8:109127260..109127274,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12550|HGNC=|MCL_coexpression_id=297|UniProt=P09803,Q4KML8|association_with_transcript=0bp_to_NM_009864,uc009ngi.1_5end|description=CAGE_peak_1_at_Cdh1_5end|id=chr8:109127260..109127274,+|ontology_enrichment_celltype=CL:0000066!4.58e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.79e-08,25;CL:0002563,8.87e-07,9;CL:0002251,8.87e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.87e-26!130;UBERON:0000925!8.87e-26!130;UBERON:0006595!8.87e-26!130;UBERON:0001007!2.23e-25!128;UBERON:0001555!2.23e-25!128;UBERON:0007026!2.23e-25!128;UBERON:0004921!5.98e-24!126;UBERON:0004185!5.98e-24!126;UBERON:0000160!1.63e-21!43;UBERON:0005409!3.38e-21!59;UBERON:0000344!1.18e-10!15;UBERON:0001242!2.54e-09!13;UBERON:0000060!2.54e-09!13;UBERON:0001262!2.54e-09!13;UBERON:0004786!2.54e-09!13;UBERON:0000077!3.07e-09!97;UBERON:0005177!7.25e-09!85;UBERON:0001041!3.94e-08!92;UBERON:0002108!5.55e-08!16;UBERON:0000466!1.05e-07!79;UBERON:0004923!5.50e-07!24;UBERON:0000485!7.93e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.83e-20,118;UBERON:0000925,1.83e-20,118;UBERON:0006595,1.83e-20,118;UBERON:0001007,4.15e-20,116;UBERON:0001555,4.15e-20,116;UBERON:0007026,4.15e-20,116;UBERON:0004921,8.17e-19,114;UBERON:0000160,4.29e-17,31;UBERON:0005409,7.02e-16,47;UBERON:0000344,8.53e-11,15;UBERON:0005177,6.12e-10,79;UBERON:0001242,1.92e-09,13;UBERON:0001262,1.92e-09,13;UBERON:0004786,1.92e-09,13;UBERON:0000485,6.55e-07,11;UBERON:0003350,8.87e-07,9;UBERON:0004808,8.87e-07,9;UBERON:0001277,8.87e-07,9|phase1_expression=78.6330839284538,592.909217579274,545.999087267443,440.085427451438,474.849151989137,385.954446125435,376.349963999392,0,0.281577444303333,0,0,0,0.171200729931206,0,0,0.809901069559304,0,0.315462165358238,0.685572168028694,0,68.4598485716112,1.29078236561151,0,495.976510659561,520.070840179274,445.029772189141,416.977612281984,390.218402394145,521.044216149377,528.003121847055,382.485130880401,0,0,15.8481681015439,253.90057376137,253.507834171701,234.794759701724,0,0,0,0,0,0,0,0,0,10.9534788208725,0.218025156380447,0,0,22.8177867249341,0,0,0,0.672187598284928,0,0,0,0.404632921719196,0.528990979272033,6.33831403506179,1.35537812827653,27.5681386794453,0,0,0,5.09320187881288,1.92109152660777,0.311068836925433,0.135005938331691,0,3.71346279724945,14.5773237028065,0,0,0,4.40463523997555,1.40456071893706,0,0.395658863190582,0.914876436024097,3.64639359389732,5.02529398202486,6.75315132038016,4.88954392885792,2.94628585473668,3.13217697758026,1.4911955666024,2.80186915332781,1.81371744256285,204.354464534683,43.0211938490693,308.706985503319,66.9231957630893,120.208637227819,64.067844854919,46.6275474837416,0,0,0,102.534009597423,0,0,0,379.72528593367,397.52162893043,333.140609264742,101.166917431087,2.84831672011889,0.29688427812965,5.89850111004862,4.56698217468212,9.91646638201052,1.65794904607885,4.46837087115678,1.25666591329675,457.80508024406,0.144599356919912,2.65383165584962,0.323533699894818,0.441683036920787,0,665.418587548696,3.51336956413857,4.60782754989601,396.724806738942,0.239630249011841,0.599902730993408,0.508280908292259,2.54644086988199,0,0.251308704225729,2.08589184230732,4.60287823194595,0.20778804455956,0.486723789203273,26.070877145681,27.7427544460507,123.0759833572,99.3285559784157,14.1831282829347,8.27647575960503,14.945156773844,18.8381022294644,11.3620953582718,10.8896662242122,12.4623293664439,33.631438196072,11.6406716183735,10.4008344092301,13.724187684788,30.2490110750053,62.8386783249851,71.3916941370441,87.251625836968,11.9420560091096,0,1.80143534980301,2.55747149456033,0,1.64168241986767,0.720248245844059,4.02466050494857,0.393528463494808,0.925602677324269,0.697601834251224,3.75582761959467,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,1.05144974282064,2.16099685996497,549.486436102056,355.686012162467,23.2484193083405,39.0157608725537,133.506689929689,187.162310850462,211.703897740317,218.379018777218,337.390162758148,248.530722678532,271.190690295491,251.878893604097,273.144686053887,336.158458836679,376.944758981467,370.801050799632,53.8656838706752,47.9843752960861,85.6578791115411,68.8341488117162,76.9991374055474,96.2964807094074,119.770001313343,133.291963625581,124.970987361734,114.018979463744,27.5700943191048,8.17541018008861,20.0490175015467,30.806109396725,35.094801000211,42.2060029566729,52.7075513187539,88.8981064723005,82.8511008820431,93.6254418971358,76.1971494594979,100.850196818164,103.28446980092,92.1912904506958,89.878104174478,75.2611893326853,189.37201992077,15.1593129416388,53.7784422258685,61.6174661363933,118.518575385694,182.246808096696,192.339261835899,176.205684015592,91.586018725697,91.9078462042416,93.1215848959725,114.540456986301,131.758641163678,137.271956593854,0,0,50.1599558479417,90.5072527879523,5.29816946959713,2.93029216480508,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.849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|EntrezGene=12550
|HGNC=
|MCL_coexpression_id=297
|UniProt=P09803,Q4KML8
|association_with_transcript=0bp_to_NM_009864,uc009ngi.1_5end
|description=CAGE_peak_1_at_Cdh1_5end
|id=chr8:109127260..109127274,+
|ontology_enrichment_celltype=CL:0000066!4.58e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000066,1.79e-08,25;CL:0002563,8.87e-07,9;CL:0002251,8.87e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.87e-26!130;UBERON:0000925!8.87e-26!130;UBERON:0006595!8.87e-26!130;UBERON:0001007!2.23e-25!128;UBERON:0001555!2.23e-25!128;UBERON:0007026!2.23e-25!128;UBERON:0004921!5.98e-24!126;UBERON:0004185!5.98e-24!126;UBERON:0000160!1.63e-21!43;UBERON:0005409!3.38e-21!59;UBERON:0000344!1.18e-10!15;UBERON:0001242!2.54e-09!13;UBERON:0000060!2.54e-09!13;UBERON:0001262!2.54e-09!13;UBERON:0004786!2.54e-09!13;UBERON:0000077!3.07e-09!97;UBERON:0005177!7.25e-09!85;UBERON:0001041!3.94e-08!92;UBERON:0002108!5.55e-08!16;UBERON:0000466!1.05e-07!79;UBERON:0004923!5.50e-07!24;UBERON:0000485!7.93e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.83e-20,118;UBERON:0000925,1.83e-20,118;UBERON:0006595,1.83e-20,118;UBERON:0001007,4.15e-20,116;UBERON:0001555,4.15e-20,116;UBERON:0007026,4.15e-20,116;UBERON:0004921,8.17e-19,114;UBERON:0000160,4.29e-17,31;UBERON:0005409,7.02e-16,47;UBERON:0000344,8.53e-11,15;UBERON:0005177,6.12e-10,79;UBERON:0001242,1.92e-09,13;UBERON:0001262,1.92e-09,13;UBERON:0004786,1.92e-09,13;UBERON:0000485,6.55e-07,11;UBERON:0003350,8.87e-07,9;UBERON:0004808,8.87e-07,9;UBERON:0001277,8.87e-07,9
|phase1_expression=78.6330839284538,592.909217579274,545.999087267443,440.085427451438,474.849151989137,385.954446125435,376.349963999392,0,0.281577444303333,0,0,0,0.171200729931206,0,0,0.809901069559304,0,0.315462165358238,0.685572168028694,0,68.4598485716112,1.29078236561151,0,495.976510659561,520.070840179274,445.029772189141,416.977612281984,390.218402394145,521.044216149377,528.003121847055,382.485130880401,0,0,15.8481681015439,253.90057376137,253.507834171701,234.794759701724,0,0,0,0,0,0,0,0,0,10.9534788208725,0.218025156380447,0,0,22.8177867249341,0,0,0,0.672187598284928,0,0,0,0.404632921719196,0.528990979272033,6.33831403506179,1.35537812827653,27.5681386794453,0,0,0,5.09320187881288,1.92109152660777,0.311068836925433,0.135005938331691,0,3.71346279724945,14.5773237028065,0,0,0,4.40463523997555,1.40456071893706,0,0.395658863190582,0.914876436024097,3.64639359389732,5.02529398202486,6.75315132038016,4.88954392885792,2.94628585473668,3.13217697758026,1.4911955666024,2.80186915332781,1.81371744256285,204.354464534683,43.0211938490693,308.706985503319,66.9231957630893,120.208637227819,64.067844854919,46.6275474837416,0,0,0,102.534009597423,0,0,0,379.72528593367,397.52162893043,333.140609264742,101.166917431087,2.84831672011889,0.29688427812965,5.89850111004862,4.56698217468212,9.91646638201052,1.65794904607885,4.46837087115678,1.25666591329675,457.80508024406,0.144599356919912,2.65383165584962,0.323533699894818,0.441683036920787,0,665.418587548696,3.51336956413857,4.60782754989601,396.724806738942,0.239630249011841,0.599902730993408,0.508280908292259,2.54644086988199,0,0.251308704225729,2.08589184230732,4.60287823194595,0.20778804455956,0.486723789203273,26.070877145681,27.7427544460507,123.0759833572,99.3285559784157,14.1831282829347,8.27647575960503,14.945156773844,18.8381022294644,11.3620953582718,10.8896662242122,12.4623293664439,33.631438196072,11.6406716183735,10.4008344092301,13.724187684788,30.2490110750053,62.8386783249851,71.3916941370441,87.251625836968,11.9420560091096,0,1.80143534980301,2.55747149456033,0,1.64168241986767,0.720248245844059,4.02466050494857,0.393528463494808,0.925602677324269,0.697601834251224,3.75582761959467,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,1.05144974282064,2.16099685996497,549.486436102056,355.686012162467,23.2484193083405,39.0157608725537,133.506689929689,187.162310850462,211.703897740317,218.379018777218,337.390162758148,248.530722678532,271.190690295491,251.878893604097,273.144686053887,336.158458836679,376.944758981467,370.801050799632,53.8656838706752,47.9843752960861,85.6578791115411,68.8341488117162,76.9991374055474,96.2964807094074,119.770001313343,133.291963625581,124.970987361734,114.018979463744,27.5700943191048,8.17541018008861,20.0490175015467,30.806109396725,35.094801000211,42.2060029566729,52.7075513187539,88.8981064723005,82.8511008820431,93.6254418971358,76.1971494594979,100.850196818164,103.28446980092,92.1912904506958,89.878104174478,75.2611893326853,189.37201992077,15.1593129416388,53.7784422258685,61.6174661363933,118.518575385694,182.246808096696,192.339261835899,176.205684015592,91.586018725697,91.9078462042416,93.1215848959725,114.540456986301,131.758641163678,137.271956593854,0,0,50.1599558479417,90.5072527879523,5.29816946959713,2.93029216480508,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.849229592366497,0,0.292255857911312,0,3.21321316421807,42.4400854772723,14.9575107080494,20.0350960004899,114.48926534294,131.417686956563,183.784941569321,248.207640268061,251.787781474124,232.107287804287,195.221318944394,175.472811061222,179.949196091365,176.109704922052,143.796724860796,163.398843291248,146.452471412425,7.14923172082955,15.4852540866927,32.3396709456886,27.4351404840438,33.1626236911052,37.992558149241,22.7077648430927,27.4018454203139,45.0569679482324,83.2500038494813,136.507078396021,223.091100229823,168.730325897221,166.765237426351,192.547590877059,221.426073756088,327.332979535322,2.22510362412612,1.36696704638282,26.4175190992925,4.62986318424279,0.376736914009382,0.683471138605126,0.915112692826091,0,0,0.414599921413271,329.361363215214,22.30168754747,128.497903224168,153.907610671067,181.488640940559,200.675196082737,182.606325005047,233.413358968349,300.495821397666,342.313144463625,173.353668351252,0,7.027277664067,6.9492565991981,2.13896307178452,2.58319646955462,2.02747350588934,2.8165737274981,8.59348939970071,1.36317147753424,0.724752362478018,3.74439008135225,21.1727450820879,84.9418652065788,91.6181737910259,56.5155579953408,34.9102056551589,31.3916540554399,21.5149854640744,17.2796746794255,15.1449674922221,14.860327297725,11.8974898461472,17.6398764138952,13.2772341463655,14.375858968333,141.026298608661,261.943424981396,232.089747048714,196.592885762336,134.653147040437,75.260672655924,197.620602584379,214.797115837224,165.017222227635,2.82375921308533,0.920650473014354,1.71868654031819,2.06223818812425,0,0,1.35004500046361,1.80128481289688,3.62513927187364,2.07104124700728,3.1136204275253,12.768795948833,10.4147499510022,38.6539680138588,10.2710449687711,17.6489768112014,40.8933979154972,41.2070114477788,43.0031740853032,57.1095698586182,49.681942778487,43.5726848601836,46.7271122274713,47.3145876271984,45.7186332886682,41.4375511416274,45.6584244222731,41.861300840624,40.384418278724,37.5357246342713,46.9730875768019,45.9662337952684,40.7725884809919,41.7144215734783,44.5137369364514,44.5072837510218,47.5612729469209,36.3036201784223,42.0992752922172,37.5965322010685,41.7595263797093,42.652440868619,53.6092666552293,43.0724418496985,66.1669675665315,47.9636309640856,65.7347819731598,87.0227768895608,18.7462565427467,28.4562930664175,6.4922993973718
|short_description=p1@Cdh1
}}

Revision as of 14:40, 14 September 2013

Short description:p1@Cdh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdh1_5end
Coexpression cluster:MCL_coexpression_mm9:297
Association with transcript: 0bp_to_NM_009864, uc009ngi.1_5end
EntrezGene:Cdh1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Cdh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G778.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5592.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6546.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3440.09
CD326+ enterocyte, pool2.CNhs13197.11849-124I4474.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7385.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8376.35
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A368.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1495.98
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2520.07
GP2+ M cell, pool1.CNhs13228.11845-124H9445.03
GP2+ M cell, pool2.CNhs13231.11846-124I1416.98
GP2+ M cell, pool3.CNhs13240.11847-124I2390.22
Ileum epithelium, pool1.CNhs13199.10252-104B9521.04
Ileum epithelium, pool2.CNhs13232.10253-104C1528.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8382.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5253.90
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6253.51
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7234.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3204.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C4308.71
Mouse hepatocyte, donor3.CNhs12615.11637-122C866.92
Mouse hepatocyte, donor6.CNhs13090.11822-124F4120.21
Mouse hepatocyte, donor8.CNhs13091.11824-124F664.07
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A746.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6102.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1379.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2397.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3333.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6101.17
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A8457.81
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4665.42
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H7396.72
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.74
epididymis, adult.CNhs10490.58-23B2123.08
eyeball, adult.CNhs10484.31-12G499.33
eyeball, embryo E12.CNhs11016.345-16C614.18
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D418.84
eyeball, neonate N00.CNhs11207.633-15C611.36
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G812.46
eyeball, neonate N16.CNhs11188.777-19A233.63
forelimb, embryo E11.CNhs10596.335-25E211.64
forelimb, embryo E12.CNhs10600.359-14H210.40
forelimb, embryo E13.CNhs10589.384-1E213.72
forelimb, embryo E14.CNhs10577.413-26A830.25
forelimb, embryo E15.CNhs11007.437-20E762.84
forelimb, embryo E17.CNhs10598.1517-43C471.39
forelimb, embryo E18.CNhs11008.1520-43B587.25
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I3549.49
intestine, adult.CNhs10496.178-9A3355.69
intestine, embryo E12.CNhs11019.1251-16I523.25
intestine, embryo E13.CNhs11010.381-16D539.02
intestine, embryo E15.CNhs10602.976-16D8133.51
intestine, embryo E16.CNhs10585.463-22H4187.16
intestine, embryo E17.CNhs10582.482-18D3211.70
intestine, embryo E18.CNhs10526.1289-20F7218.38
intestine, neonate N00.CNhs11126.644-26D1337.39
intestine, neonate N01.CNhs11192.1322-23E9248.53
intestine, neonate N06.CNhs11102.688-20B8271.19
intestine, neonate N07.CNhs11095.720-20F2251.88
intestine, neonate N10.CNhs11098.755-23A5273.14
intestine, neonate N20.CNhs11187.827-18D1336.16
intestine, neonate N25.CNhs11121.1352-25E3376.94
intestine, neonate N30.CNhs11131.1384-42G1370.80
kidney, embryo E14.CNhs10606.411-4I953.87
kidney, embryo E15.CNhs10997.434-16F847.98
kidney, embryo E16.CNhs10584.464-22A585.66
kidney, embryo E17.CNhs11028.483-18I268.83
kidney, embryo E18.CNhs11001.1288-20C777.00
kidney, neonate N00.CNhs11214.646-21G796.30
kidney, neonate N10.CNhs11206.758-6D5119.77
kidney, neonate N20.CNhs11113.832-19I1133.29
kidney, neonate N25.CNhs11122.1353-25F3124.97
kidney, neonate N30.CNhs11203.1385-42H1114.02
liver, adult pregnant day01.CNhs10466.508-5B227.57
liver, embryo E12.CNhs10601.355-15F88.18
liver, embryo E13.CNhs10524.378-3H620.05
liver, embryo E14.CNhs10594.409-16E130.81
liver, embryo E15.CNhs10520.433-16D735.09
liver, embryo E16.CNhs10523.462-17F542.21
liver, embryo E17.CNhs10510.481-18A352.71
liver, embryo E18.CNhs10579.499-43G488.90
liver, neonate N00.CNhs11117.641-24F482.85
liver, neonate N03.CNhs11123.1345-25G293.63
liver, neonate N06.CNhs11101.684-20A876.20
liver, neonate N07.CNhs11103.716-20H2100.85
liver, neonate N10.CNhs11115.751-24B9103.28
liver, neonate N20.CNhs11220.823-25A392.19
liver, neonate N25.CNhs11198.1368-26H189.88
liver, neonate N30.CNhs11106.1382-42D175.26
lung, adult.CNhs10474.28-22B1189.37
lung, embryo E12.CNhs10522.354-16G215.16
lung, embryo E14.CNhs10604.404-26F853.78
lung, embryo E15.CNhs11020.432-17C561.62
lung, embryo E16.CNhs10998.458-17B6118.52
lung, embryo E17.CNhs10605.480-44A6182.25
lung, embryo E18.CNhs10583.1287-20I6192.34
lung, neonate N00.CNhs11224.640-42C6176.21
lung, neonate N06.CNhs11212.683-20E591.59
lung, neonate N07.CNhs11111.715-19A391.91
lung, neonate N10.CNhs11219.750-23E693.12
lung, neonate N20.CNhs11109.822-18A4114.54
lung, neonate N25.CNhs11119.1359-25C7131.76
lung, neonate N30.CNhs11133.1394-42H2137.27
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B650.16
mammary gland, adult pregnant day19.CNhs10476.588-5H290.51
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I742.44
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I420.04
oviduct, adult pregnant day01.CNhs10500.988-6G6114.49
pancreas, adult.CNhs10486.34-16E4131.42
pancreas, embryo E14.CNhs11012.405-44F4183.78
pancreas, embryo E15.CNhs11042.1556-45F2248.21
pancreas, embryo E16.CNhs11003.460-26E5251.79
pancreas, embryo E17.CNhs10599.1558-45G3232.11
pancreas, embryo E18.CNhs10580.1535-43I7195.22
pancreas, neonate N00.CNhs11105.645-26G9175.47
pancreas, neonate N01.CNhs11138.1531-43D7179.95
pancreas, neonate N02.CNhs11139.1539-43D8176.11
pancreas, neonate N16.CNhs11136.787-43B6143.80
pancreas, neonate N25.CNhs11094.1555-45E2163.40
pancreas, neonate N30.CNhs11182.1548-44H5146.45
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C732.34
pituitary gland, embryo E14.CNhs11037.398-44A527.44
pituitary gland, embryo E15.CNhs10592.427-16B933.16
pituitary gland, embryo E16.CNhs11036.449-43F637.99
pituitary gland, embryo E17.CNhs11039.1265-44F522.71
pituitary gland, neonate N00.CNhs11190.1308-22E927.40
placenta, adult pregnant day10.CNhs10472.539-13I745.06
placenta, adult pregnant day17.CNhs10464.577-18G383.25
prostate, adult.CNhs10470.859-1F8136.51
skin, adult.CNhs10492.30-1C3223.09
skin, neonate N00.CNhs11124.650-25G4168.73
skin, neonate N03.CNhs11215.662-22H3166.77
skin, neonate N06.CNhs11097.693-20I5192.55
skin, neonate N10.CNhs11108.762-6C4221.43
small intestine, neonate N16.CNhs11114.790-21I1327.33
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C126.42
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H6329.36
stomach, embryo E12.CNhs10588.356-43E322.30
stomach, embryo E15.CNhs10603.1252-16G8128.50
stomach, embryo E16.CNhs11022.459-17D4153.91
stomach, embryo E17.CNhs11006.1035-18D5181.49
stomach, embryo E18.CNhs10999.1286-20C6200.68
stomach, neonate N03.CNhs11193.1340-24B8182.61
stomach, neonate N07.CNhs11210.718-18A9233.41
stomach, neonate N25.CNhs11104.1355-25E4300.50
stomach, neonate N30.CNhs11134.1386-42I1342.31
submandibular gland, adult.CNhs10469.59-29C1173.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F57.03
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I48.59
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B521.17
thymus, embryo E14.CNhs11041.402-44I484.94
thymus, embryo E15.CNhs11005.430-45I291.62
thymus, embryo E16.CNhs11002.456-26C556.52
thymus, embryo E17.CNhs10581.478-18C134.91
thymus, embryo E18.CNhs10595.1273-19G431.39
thymus, neonate N02.CNhs11181.1541-43F821.51
thymus, neonate N03.CNhs11137.2104-43C717.28
thymus, neonate N06.CNhs11197.681-26C415.14
thymus, neonate N07.CNhs11211.713-19D314.86
thymus, neonate N10.CNhs11194.748-24E411.90
thymus, neonate N20.CNhs11186.820-7A217.64
thymus, neonate N25.CNhs11125.1362-25G713.28
thymus, neonate N30.CNhs11132.1393-42G214.38
tongue, adult.CNhs10499.32-1B4141.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3261.94
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7232.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5196.59
urinary bladder, adult.CNhs10481.879-12E4134.65
uterus, adult pregnant day19.CNhs10497.590-15F575.26
uterus, adult.CNhs10509.92-27E5197.62
vagina, adult.CNhs10502.89-27D5214.80
vesicular gland, adult.CNhs10491.51-27F8165.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H210.41
whole body, embryo E14.5.CNhs10578.420-27D238.65
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F217.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G540.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G541.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G543.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G557.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.68
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G543.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G547.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G541.44
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G541.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G540.38
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G537.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G541.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G544.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G544.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G547.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.60
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G553.61
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G543.07
whole body, embryo E17.5.CNhs10513.490-9F966.17
whole body, embryo E17.CNhs10517.475-3I547.96
whole body, embryo E18.CNhs10516.493-3B365.73
whole body, neonate N00.CNhs10525.657-19C287.02
whole body, neonate N01.CNhs10576.659-23C618.75
whole body, neonate N06.CNhs10515.692-21D128.46
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.79e-0825
intestinal epithelial cell8.87e-079
epithelial cell of alimentary canal8.87e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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