FFCP PHASE1:Mm9::chr9:40263897..40263922,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2423|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:40263897..40263922,-|id=chr9:40263897..40263922,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!9.49e-09!26;UBERON:0000990!9.49e-09!26;UBERON:0003135!1.78e-08!15;UBERON:0003101!2.33e-08!16;UBERON:0000079!2.33e-08!16;UBERON:0003133!2.45e-08!24;UBERON:0000991!3.63e-08!18;UBERON:0005564!3.63e-08!18;UBERON:0000473!6.39e-08!14;UBERON:0004176!1.10e-07!17;UBERON:0009196!1.10e-07!17;UBERON:0009117!1.10e-07!17;UBERON:0007100!1.39e-07!18;UBERON:0000948!1.39e-07!18;UBERON:0005498!1.39e-07!18;UBERON:0004140!1.39e-07!18;UBERON:0009881!1.39e-07!18;UBERON:0004141!1.39e-07!18;UBERON:0003084!1.39e-07!18;UBERON:0007005!1.39e-07!18;UBERON:0004139!1.39e-07!18;UBERON:0004291!1.39e-07!18;UBERON:0003103!1.64e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.66e-09,15;UBERON:0003101,3.58e-09,16;UBERON:0000079,3.58e-09,16;UBERON:0000473,1.11e-08,14;UBERON:0005156,1.38e-08,26;UBERON:0000990,1.38e-08,26;UBERON:0003133,4.06e-08,24;UBERON:0000991,5.87e-08,18;UBERON:0005564,5.87e-08,18;UBERON:0003103,1.04e-07,43;UBERON:0007100,1.21e-07,18;UBERON:0000948,1.21e-07,18;UBERON:0005498,1.21e-07,18;UBERON:0004140,1.21e-07,18;UBERON:0009881,1.21e-07,18;UBERON:0004141,1.21e-07,18;UBERON:0003084,1.21e-07,18;UBERON:0007005,1.21e-07,18;UBERON:0004139,1.21e-07,18;UBERON:0004291,1.21e-07,18;UBERON:0004176,1.97e-07,17;UBERON:0009196,1.97e-07,17;UBERON:0009117,1.97e-07,17;UBERON:0002369,8.41e-07,7;UBERON:0006858,8.41e-07,7|phase1_expression=3.84357233051505,1.74487703819681,0.454999239389536,11.4936400296595,7.01254021924886,0.16787927191189,0.934450562382103,1.03298658753261,1.97104211012333,3.7450324211519,3.08192342805909,6.62108919661292,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,3.99703463710028,0.0992909512008853,0,0.799962113967033,0.22940928106717,2.29692785646008,0,0.646413698057667,0.380046838912748,0.252030129759931,1.10865255327652,0,0,0,0,0.166234645358492,0,5.02237956884289,3.906676722619,3.66466620781659,4.1176204162171,4.09827290975067,7.2826552954673,0.755380907853464,0.709638518536602,1.10128051297009,2.34717403304412,0.65407546914134,0.659058548203415,0.194429899074283,0.979904951377538,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,0.606949382578793,2.11596391708813,1.26766280701236,0.677689064138264,0.889294796111139,2.2497492932035,0,0.7104801149461,0.299600110518405,0.384218305321555,2.07379224616955,3.10513658162888,2.10324961351382,0.856952953211411,0.883474163806454,2.08234358665422,1.24599112323707,2.75765635983006,0,0.893811366596314,0.153606533256243,0.263772575460388,0.548925861614458,0,0,0,0.15279824777681,1.47314292736834,1.42371680799103,0.559198337475902,0.302904773332736,1.66257432234928,1.44932244350839,1.72084775396277,0,0,0,0.448026887097336,2.10666630197628,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,70.6584581948566,21.3386951922347,54.1948551395611,58.3457208057828,50.0399166634707,63.2627244390092,60.0686306555849,0.494389935468748,0.578397427679647,0,2.58826959915855,0.662524555381181,0,0,1.75668478206928,2.09446706813455,0.766371165625774,0,0,0.254140454146129,0.599162557619291,0,0.879580464790051,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,2.85150218780886,2.36373244159177,8.59257378674494,0.841767423545896,1.04096354370163,1.83921683546778,1.62055916824814,1.80845781402858,0.95251098811859,0.384341160854549,0.468508622798644,1.03481348295606,1.94011193639558,2.45837904218165,1.58356011747554,1.7535658594206,2.78047249225598,2.78601733217733,1.23469281844766,6.17006227137329,0,0.257347907114715,0.284163499395593,8.69928244649108,9.14651633926275,6.66229627405755,9.70653415899362,8.06733350164356,8.4846912088058,7.44108623201305,8.58474884478781,6.42209383019432,4.44311594766397,3.94001913789829,7.37726166867287,10.0877991323479,4.61055242111206,9.39444931322602,0.841159794256509,2.36680608472354,2.64335026387038,1.58670339998127,1.06644125267617,0.464473343720877,2.96395161040815,1.4117846723634,0.667134131534611,0,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,3.22435431620239,5.48392860526698,9.01661885384643,2.8511185898344,2.32742984601151,3.15611189506434,4.11037491307672,3.24742325555125,2.511979645462,2.34454611451421,0.592905254174298,0.333690211432188,0.786235980452812,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,4.98833613449833,1.70542270593436,1.79261474086228,2.37643120085263,4.69380496577004,6.03022526790537,4.04674189506223,2.53673742215138,2.99506773801763,1.99318220683897,3.02964060449226,3.4411296090305,1.03610989119537,2.74833211304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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2423 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:40263897..40263922,- | |||
|id=chr9:40263897..40263922,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!9.49e-09!26;UBERON:0000990!9.49e-09!26;UBERON:0003135!1.78e-08!15;UBERON:0003101!2.33e-08!16;UBERON:0000079!2.33e-08!16;UBERON:0003133!2.45e-08!24;UBERON:0000991!3.63e-08!18;UBERON:0005564!3.63e-08!18;UBERON:0000473!6.39e-08!14;UBERON:0004176!1.10e-07!17;UBERON:0009196!1.10e-07!17;UBERON:0009117!1.10e-07!17;UBERON:0007100!1.39e-07!18;UBERON:0000948!1.39e-07!18;UBERON:0005498!1.39e-07!18;UBERON:0004140!1.39e-07!18;UBERON:0009881!1.39e-07!18;UBERON:0004141!1.39e-07!18;UBERON:0003084!1.39e-07!18;UBERON:0007005!1.39e-07!18;UBERON:0004139!1.39e-07!18;UBERON:0004291!1.39e-07!18;UBERON:0003103!1.64e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.66e-09,15;UBERON:0003101,3.58e-09,16;UBERON:0000079,3.58e-09,16;UBERON:0000473,1.11e-08,14;UBERON:0005156,1.38e-08,26;UBERON:0000990,1.38e-08,26;UBERON:0003133,4.06e-08,24;UBERON:0000991,5.87e-08,18;UBERON:0005564,5.87e-08,18;UBERON:0003103,1.04e-07,43;UBERON:0007100,1.21e-07,18;UBERON:0000948,1.21e-07,18;UBERON:0005498,1.21e-07,18;UBERON:0004140,1.21e-07,18;UBERON:0009881,1.21e-07,18;UBERON:0004141,1.21e-07,18;UBERON:0003084,1.21e-07,18;UBERON:0007005,1.21e-07,18;UBERON:0004139,1.21e-07,18;UBERON:0004291,1.21e-07,18;UBERON:0004176,1.97e-07,17;UBERON:0009196,1.97e-07,17;UBERON:0009117,1.97e-07,17;UBERON:0002369,8.41e-07,7;UBERON:0006858,8.41e-07,7 | |||
|phase1_expression=3.84357233051505,1.74487703819681,0.454999239389536,11.4936400296595,7.01254021924886,0.16787927191189,0.934450562382103,1.03298658753261,1.97104211012333,3.7450324211519,3.08192342805909,6.62108919661292,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,3.99703463710028,0.0992909512008853,0,0.799962113967033,0.22940928106717,2.29692785646008,0,0.646413698057667,0.380046838912748,0.252030129759931,1.10865255327652,0,0,0,0,0.166234645358492,0,5.02237956884289,3.906676722619,3.66466620781659,4.1176204162171,4.09827290975067,7.2826552954673,0.755380907853464,0.709638518536602,1.10128051297009,2.34717403304412,0.65407546914134,0.659058548203415,0.194429899074283,0.979904951377538,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,0.606949382578793,2.11596391708813,1.26766280701236,0.677689064138264,0.889294796111139,2.2497492932035,0,0.7104801149461,0.299600110518405,0.384218305321555,2.07379224616955,3.10513658162888,2.10324961351382,0.856952953211411,0.883474163806454,2.08234358665422,1.24599112323707,2.75765635983006,0,0.893811366596314,0.153606533256243,0.263772575460388,0.548925861614458,0,0,0,0.15279824777681,1.47314292736834,1.42371680799103,0.559198337475902,0.302904773332736,1.66257432234928,1.44932244350839,1.72084775396277,0,0,0,0.448026887097336,2.10666630197628,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,70.6584581948566,21.3386951922347,54.1948551395611,58.3457208057828,50.0399166634707,63.2627244390092,60.0686306555849,0.494389935468748,0.578397427679647,0,2.58826959915855,0.662524555381181,0,0,1.75668478206928,2.09446706813455,0.766371165625774,0,0,0.254140454146129,0.599162557619291,0,0.879580464790051,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,2.85150218780886,2.36373244159177,8.59257378674494,0.841767423545896,1.04096354370163,1.83921683546778,1.62055916824814,1.80845781402858,0.95251098811859,0.384341160854549,0.468508622798644,1.03481348295606,1.94011193639558,2.45837904218165,1.58356011747554,1.7535658594206,2.78047249225598,2.78601733217733,1.23469281844766,6.17006227137329,0,0.257347907114715,0.284163499395593,8.69928244649108,9.14651633926275,6.66229627405755,9.70653415899362,8.06733350164356,8.4846912088058,7.44108623201305,8.58474884478781,6.42209383019432,4.44311594766397,3.94001913789829,7.37726166867287,10.0877991323479,4.61055242111206,9.39444931322602,0.841159794256509,2.36680608472354,2.64335026387038,1.58670339998127,1.06644125267617,0.464473343720877,2.96395161040815,1.4117846723634,0.667134131534611,0,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,3.22435431620239,5.48392860526698,9.01661885384643,2.8511185898344,2.32742984601151,3.15611189506434,4.11037491307672,3.24742325555125,2.511979645462,2.34454611451421,0.592905254174298,0.333690211432188,0.786235980452812,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,4.98833613449833,1.70542270593436,1.79261474086228,2.37643120085263,4.69380496577004,6.03022526790537,4.04674189506223,2.53673742215138,2.99506773801763,1.99318220683897,3.02964060449226,3.4411296090305,1.03610989119537,2.74833211304872,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.117211686592203,0,3.53459298086122,1.26203287766503,0.390438744296638,0.430846795465598,1.19484398976276,0.445597348164788,0.849229592366497,0.809621403349789,1.46127928955656,0.395287777946524,1.60660658210904,57.3437944241405,0.890328018336276,0.977321756121456,4.61916344323099,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.614870295887855,2.06742634534577,4.36240475373007,0.712994756769443,0.316036757935816,0,0,2.38307724027652,3.6012218806262,2.97524972700335,2.57204442037911,5.14286677562593,2.31879462882692,1.97458824722545,3.65357938937519,2.58138878870081,1.90648863777438,1.98475558249466,0.8244312647074,1.45317984026315,0.482503399425247,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0.138199973804424,0,1.26534397432454,2.23651413839534,1.18805874903981,1.04544148007234,1.52853794622324,1.21377911746339,1.57041565878138,1.04702376793612,0.388844919875379,1.86401793926078,3.38215763210514,21.6798991763769,20.351394326223,20.417374776125,25.5736450485908,29.3983658353954,26.5227359339404,19.1400445720607,12.1636839533825,3.62376181239009,6.33666013767304,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,0,0.993406773906324,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.116876902181569,5.44152920676507,0.443971906748129,2.15313255862742,1.84673078000486,1.15913756419314,3.00291960721891,2.01466786693992,0.428736758158132,3.51100472824754,1.12950368523413,0,1.14579102687879,0.343706364687375,0,1.5107877947794,0,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| |||
|short_description=p@chr9:40263897..40263922,- | |||
}} |
Revision as of 17:47, 14 September 2013
Short description: | p@chr9:40263897..40263922, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:40263897..40263922, - |
Coexpression cluster: | MCL_coexpression_mm9:2423 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.66e-09 | 15 |
male organism | 3.58e-09 | 16 |
male reproductive system | 3.58e-09 | 16 |
testis | 1.11e-08 | 14 |
reproductive structure | 1.38e-08 | 26 |
reproductive system | 1.38e-08 | 26 |
reproductive organ | 4.06e-08 | 24 |
gonad | 5.87e-08 | 18 |
gonad primordium | 5.87e-08 | 18 |
compound organ | 1.04e-07 | 43 |
primary circulatory organ | 1.21e-07 | 18 |
heart | 1.21e-07 | 18 |
primitive heart tube | 1.21e-07 | 18 |
primary heart field | 1.21e-07 | 18 |
anterior lateral plate mesoderm | 1.21e-07 | 18 |
heart tube | 1.21e-07 | 18 |
heart primordium | 1.21e-07 | 18 |
cardiac mesoderm | 1.21e-07 | 18 |
cardiogenic plate | 1.21e-07 | 18 |
heart rudiment | 1.21e-07 | 18 |
external genitalia | 1.97e-07 | 17 |
indifferent external genitalia | 1.97e-07 | 17 |
indifferent gonad | 1.97e-07 | 17 |
adrenal gland | 8.41e-07 | 7 |
adrenal/interrenal gland | 8.41e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.