FFCP PHASE1:Hg19::chr1:6260914..6260929,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10315 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000497965_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_6_at_RPL22_5end | |||
|id=chr1:6260914..6260929,- | |||
|ontology_enrichment_celltype=CL:0002322!6.25e-21!5;CL:0000039!1.03e-14!7;CL:0000586!1.03e-14!7;CL:0000540!5.27e-07!6;CL:0000031!5.27e-07!6;CL:0000404!5.27e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.74e-45;5!CL:0000039;1.40e-21;7!CL:0000586;1.40e-21;7!CL:0002321;4.33e-15;15!CL:0000540;1.03e-14;6!CL:0000404;1.03e-14;6!CL:0000148;8.84e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.74e-45,5;CL:0000039,1.26e-21,7;CL:0000586,1.26e-21,7;CL:0000540,1.05e-14,6;CL:0000031,1.05e-14,6;CL:0000404,1.05e-14,6;CL:0000047,3.65e-11,8;CL:0000148,9.20e-09,10;CL:0000541,9.20e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.88e-23;10!UBERON:0005564;4.88e-23;10!CL:0000031;1.03e-14;6 | |||
|ontology_enrichment_disease=DOID:2531!3.11e-23!51;DOID:0060083!3.11e-23!51;DOID:1240!3.46e-19!39;DOID:8692!1.18e-15!31;DOID:3095!1.39e-10!22;DOID:2994!1.39e-10!22;DOID:162!2.69e-10!235;DOID:14566!6.29e-10!239;DOID:0050686!1.84e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.19e-14;22!DOID:2994;1.19e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.19e-14,22;DOID:2994,1.19e-14,22;DOID:2531,8.31e-08,51;DOID:0060083,8.31e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.01e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.43e-19;8!UBERON:0003135;8.01e-14;11!UBERON:0000991;6.44e-11;21!UBERON:0000922;5.00e-09;49!UBERON:0003101;5.51e-07;22!UBERON:0000079;5.51e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.87e-19,8;UBERON:0003135,7.50e-14,11;UBERON:0000991,6.44e-11,21;UBERON:0009196,6.44e-11,21;UBERON:0009117,6.44e-11,21;UBERON:0005564,6.44e-11,21;UBERON:0004176,2.05e-10,22;UBERON:0003101,5.34e-07,22;UBERON:0000079,5.34e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,1.85921281392724,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,4.37348235460901,2.90484857173796,3.00617059544574,4.03713361401005,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0.28853842595289,0,4.62336190913585,0.399158742865633,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0,0,1.69291777801603,0,0,0,0,0,0,0.500547425135725,0.19538809540204,0.278406173895242,1.23087398947712,2.43410110628385,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0.338693328263138,0,0,5.46560704781065,5.22649859069488,7.47792608452533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01866279736126,2.73163929909239,0.126698501011437,7.75115106039061,3.20660886318673,19.2060340027826,4.76344324655513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RPL22 | |||
}} |
Revision as of 16:01, 10 January 2014
Short description: | p6@RPL22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RPL22_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -12bp_to_ENST00000497965_5end |
EntrezGene: | RPL22 |
HGNC: | 10315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.74e-45 | 5 |
germ line cell | 1.26e-21 | 7 |
germ cell | 1.26e-21 | 7 |
neuron | 1.05e-14 | 6 |
neuroblast | 1.05e-14 | 6 |
electrically signaling cell | 1.05e-14 | 6 |
neuronal stem cell | 3.65e-11 | 8 |
melanocyte | 9.20e-09 | 10 |
melanoblast | 9.20e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 5.87e-19 | 8 |
male reproductive organ | 7.50e-14 | 11 |
gonad | 6.44e-11 | 21 |
indifferent external genitalia | 6.44e-11 | 21 |
indifferent gonad | 6.44e-11 | 21 |
gonad primordium | 6.44e-11 | 21 |
external genitalia | 2.05e-10 | 22 |
male organism | 5.34e-07 | 22 |
male reproductive system | 5.34e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.19e-14 | 22 |
germ cell cancer | 1.19e-14 | 22 |
hematologic cancer | 8.31e-08 | 51 |
immune system cancer | 8.31e-08 | 51 |