FFCP PHASE1:Hg19::chr1:14026722..14026733,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9347 | |||
|TSSclassifier=strong | |||
|UniProt=B1AJZ4 | |||
|association_with_transcript=-1bp_to_ENST00000376048,NM_001135610,uc001avg.2_5end | |||
|description=CAGE_peak_5_at_PRDM2_5end | |||
|id=chr1:14026722..14026733,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.43e-25!140;CL:0000037!7.36e-25!172;CL:0000566!7.36e-25!172;CL:0000988!1.25e-24!182;CL:0000542!1.06e-22!53;CL:0000051!1.06e-22!53;CL:0002032!3.29e-22!165;CL:0000837!3.29e-22!165;CL:0000838!5.80e-22!52;CL:0002087!3.11e-18!119;CL:0002031!4.28e-18!124;CL:0000945!7.17e-15!24;CL:0000826!7.17e-15!24;CL:0000236!2.98e-10!14;CL:0000084!1.14e-07!25;CL:0000827!1.14e-07!25;CL:0000134!9.27e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.70e-44;24!CL:0000236;7.19e-43;13!CL:0000542;4.35e-30;53!CL:0000624;8.58e-11;6!CL:0002087;6.94e-10;104!CL:0000791;8.39e-10;18!CL:0000789;8.39e-10;18!CL:0002419;8.39e-10;18!CL:0000771;3.74e-09;2!CL:0000081;5.43e-09;11!CL:0000084;9.24e-09;25!CL:0000815;1.49e-08;2!CL:0000792;1.49e-08;2!CL:0002677;1.49e-08;2!CL:0000094;3.28e-08;8!CL:0000738;1.33e-07;136!CL:0000453;1.38e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.85e-48,53;CL:0000051,1.85e-48,53;CL:0000838,1.26e-45,52;CL:0000945,1.89e-44,24;CL:0000826,1.89e-44,24;CL:0000236,5.15e-40,14;CL:0000738,2.21e-37,136;CL:0000037,3.16e-32,168;CL:0000988,5.44e-32,177;CL:0002032,1.31e-28,161;CL:0000837,1.31e-28,161;CL:0002087,2.42e-27,115;CL:0002031,1.43e-20,120;CL:0000624,7.60e-11,6;CL:0000134,2.05e-10,354;CL:0002320,4.94e-10,361;CL:0000791,5.14e-10,18;CL:0000789,5.14e-10,18;CL:0002420,5.14e-10,18;CL:0002419,5.14e-10,18;CL:0000790,5.14e-10,18;CL:0000219,2.15e-09,386;CL:0000771,3.92e-09,2;CL:0000081,4.84e-09,11;CL:0000084,5.77e-09,25;CL:0000827,5.77e-09,25;CL:0000815,1.02e-08,2;CL:0000792,1.02e-08,2;CL:0002677,1.02e-08,2;CL:0000094,3.17e-08,8;CL:0000453,1.18e-07,5;CL:0000034,3.87e-07,441;CL:0000048,4.64e-07,427;CL:0000723,7.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;4.35e-30;53!CL:0000790;8.39e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.96e-10,371 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,1.52826811495903,0.821005894499457,0.629686250509434,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0.852139206383318,1.56386155736164,0.587200878669695,0.553995408531877,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0,0.145398238779565,0,0.727752183563449,0,0,0.929119112685311,0,0.256160706529101,0.236482229888585,0,1.29096936716765,1.35426486594342,0,0.272906150057846,0.449446968890169,0.306083892370903,0,0.639337125799041,0.659702600373432,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0.59675003159727,0,1.75996244461323,2.73069305631066,1.77901850772711,1.70692089026603,1.20118796110804,4.02326707968138,3.30522436392431,3.81621501814146,3.98449078376614,4.11066032559657,6.11637165000366,0,1.12101712596307,0,2.360517241366,2.35806457649499,0.822405995998037,0.334372990781356,1.30368906653436,1.4203434172042,0,1.22551502573691,1.76763544484902,0.664601683750863,0.270803863765016,0.25618263945135,1.04047478047903,0,0,0,0.296573126324121,0.535081656179426,0,0,0.383220493601921,1.37450978193052,0.506039384039006,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,2.82249440514625,1.87208137048455,1.73789284659359,0,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.196468613246569,0.364295288292542,0,0,0,0.398873881556595,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.276149695926898,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0.573609190778008,0.365921118388786,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0.394061520403854,1.2937654491571,0.385029108839245,0,0,0,0.167516265334349,0,1.49801404789436,0,2.48649308061621,0,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.6541442089831,1.07857100409308,0.853820462427555,0,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0,0,0.178064071293475,0,0.192190067365106,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0,2.04383492638291,0,0.497992903438899,0.318852545457645,0.199579371432817,0.5745161103971,0.635020748171649,0,0.561594356226918,0,0.156679895773023,0,0.677167111206413,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,4.22961015263549,0,0.146508179271894,0,0.66866030566487,0,0,0.296964680832639,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0.597743964753209,0.828851746593443,0.251932747854276,0.306806047506464,1.10776324914963,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.46112780877612,0.179515288819544,0.217294743844016,0.31900115973192,0,0,0,0,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0,0.265372693510018,0,2.96521128680622,0.123563938946503,0.835375596043643,0.067401132980677,0,0,2.55436704901932,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0.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| |||
|short_description=p5@PRDM2 | |||
}} |
Revision as of 16:27, 10 January 2014
Short description: | p5@PRDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRDM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000376048, NM_001135610, uc001avg.2_5end |
EntrezGene: | PRDM2 |
HGNC: | 9347 |
UniProt: | B1AJZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.96e-10 | 371 |