FFCP PHASE1:Hg19::chr1:27692193..27692207,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:27692193..27692207,+ | |||
|id=chr1:27692193..27692207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.99e-16;2!CL:0001016;3.99e-16;2!CL:1001319;1.17e-08;1!CL:1000600;1.17e-08;1!CL:0000453;5.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.02e-16,2;CL:0001016,5.02e-16,2;CL:1001319,6.16e-09,1;CL:1000600,6.16e-09,1;CL:0000453,6.27e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.92e-20!106;DOID:0050687!2.94e-18!143;DOID:162!5.48e-16!235;DOID:14566!1.13e-15!239;DOID:1749!5.90e-09!14;DOID:299!2.56e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;4.69e-09;1!DOID:3347;4.69e-09;1!DOID:3603;4.69e-09;1!DOID:1749;6.38e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.52e-09,1;DOID:3603,4.52e-09,1;DOID:1749,5.25e-09,14;DOID:3347,5.70e-09,1;DOID:162,8.57e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.69e-09;1!UBERON:0005056;4.69e-09;1!UBERON:0004176;4.69e-09;1!UBERON:0004645;1.17e-08;1!UBERON:0001256;1.17e-08;1!UBERON:0001259;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.89e-09,1;UBERON:0005056,4.89e-09,1;UBERON:0004645,6.16e-09,1;UBERON:0001256,6.16e-09,1;UBERON:0001259,6.16e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,0,0,1.46062018077475,0,0,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.15295962733569,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0.672510863961164,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0,0,0,0,0.846694330895531,0,0,0.684704037099577,0,0,0,0,0,0.851692475380653,1.37402137902306,0,0,0,0,0,0,0,0,0,0.935702702041099,0.439524537815682,0,0.66866030566487,0,0,0,0,0,0,2.11486539543521,0.494411622680279,1.68900326502395,0.796991953004279,0,0,0.306806047506464,0.123084805461069,0,1.07842021376792,0,0,0,0,0,0,0,0,0.260427761085233,0.61221999997337,0,0,0.254253650292766,0,0,0,0.520874984799877,0,0.361789315876224,1.52581736317083,0.331737779793674,0,0,0.32681539055697,0.83654246567162,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0.476809736941136,0.210998064528027,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.252746318513952,0.150323419414493,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0,0.693373365065693,0.173559738335131,2.15583274311631,2.87295381715328,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.164230914106418,0.193978032976839,0,0,0,0.397429223405979,0,0.195551382734803,0.160317640503067,0.213452994739353,0.39961921916426,0.432271251462318,0,0.343189995723929,0.432164393964449,0.869767748958028,0,0,0,1.01998217636322,1.15580235960608,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.508039992394707,0,0.136203406111576,0,0,0.415440338029185,1.1248694577575,3.86900977278975,0,0.335434687599266,0.0788057072991982,0.157363764404994,0.105600336519406,0,4.98979513030558,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0.146552233678082,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0.638341257770182,1.08803560673895,1.2534494701135,0.919036730290385,0,0,0,0.122026264901963,0,0.573409195690071,0.554645257684261,0.124192805882767,0.553394539744923,0.874862855734746,1.06154382279153,0.285465333544967,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0.385239660814607,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0.194860308839388,0.265729680626726,0.163565394255844,0.327609848846413,0.491545817507439,2.53574548030352,0,0.106691729694141,0.172214979660816,0.567515953566836,0.920529751259204,0,0,0,0,0.314531883711793,0.109209638192014,0,0,0.619678821295011,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.588886311006154,0.825788063434183,0.366857197043358,0.693153996902029,1.1441462864015,2.0710797781803,2.58591088751157,0.150420656698515,0.20170506870352,0,0,0.49131575253029,0.443568258651136,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0.345701962667338,0,0.0679697329768317,0,0.709163045303809,0.667388411352415,0,0.157115589916002,0.280272163313789,0,1.29556554731173,0,0.214429632529969,0.316027223465453,0.23248285073625,0,1.60342272946051,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0.223710863595585,0.490751168076215,0,0.647428837187895,0,0,0,0,1.39265542612958,0,0.22589216407792,0.769583617218004,0,0,0.218559560503957,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0.160482733378337,0.730336388246517,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,1.00933139868063,0.218531143927391,0.253397002022874,0.101988829741982,0.26721740526556,0.275684698604535,0.50141507858475,0,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0.560659312903067,0,0.202117188958219,0,0,0,0,0,1.79087190944144,0.853818767021724,0,0.179650404213174,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr1:27692193..27692207,+ | |||
}} |
Revision as of 17:19, 10 January 2014
Short description: | p@chr1:27692193..27692207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27692193..27692207, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.02e-16 | 2 |
immature CD1a-positive Langerhans cell | 5.02e-16 | 2 |
bladder cell | 6.16e-09 | 1 |
lower urinary tract cell | 6.16e-09 | 1 |
Langerhans cell | 6.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.89e-09 | 1 |
external female genitalia | 4.89e-09 | 1 |
urinary bladder urothelium | 6.16e-09 | 1 |
wall of urinary bladder | 6.16e-09 | 1 |
mucosa of urinary bladder | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.52e-09 | 1 |
mucinous cystadenocarcinoma | 4.52e-09 | 1 |
squamous cell carcinoma | 5.25e-09 | 14 |
osteosarcoma | 5.70e-09 | 1 |
cancer | 8.57e-07 | 235 |