FFCP PHASE1:Hg19::chr1:156084164..156084191,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |||
|TSSclassifier=weak | |||
|UniProt=P02545 | |||
|association_with_transcript=-269bp_to_ENST00000347559,ENST00000361308,NM_005572,NM_170707,NM_170708,uc001fng.2,uc001fnh.2,uc001fni.2_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_28_at_LMNA_5end | |||
|id=chr1:156084164..156084191,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.74e-07!140;CL:0000557!6.83e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.08e-27;3!CL:0000767;2.45e-27;3!CL:0001014;2.85e-19;2!CL:0001016;2.85e-19;2!CL:0000094;4.30e-18;8!CL:0000097;1.13e-17;5!CL:0000081;3.14e-13;11!CL:0002032;2.74e-10;1!CL:0000557;2.74e-10;1!CL:0000163;4.64e-10;9!CL:0000453;2.94e-08;5!CL:0000791;3.11e-08;18!CL:0000789;3.11e-08;18!CL:0002419;3.11e-08;18!CL:0000840;5.10e-07;5!CL:0000624;7.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.32e-28,3;CL:0000825,4.32e-28,3;CL:0000767,7.28e-27,3;CL:0001014,4.53e-19,2;CL:0001016,4.53e-19,2;CL:0000094,7.04e-18,8;CL:0000097,1.13e-17,5;CL:0002028,1.13e-17,5;CL:0000738,2.69e-14,136;CL:0002032,2.20e-13,161;CL:0000837,2.20e-13,161;CL:0000081,4.48e-13,11;CL:0000037,1.03e-12,168;CL:0000988,6.29e-12,177;CL:0000163,4.64e-10,9;CL:0002031,6.22e-09,120;CL:0000791,3.24e-08,18;CL:0000789,3.24e-08,18;CL:0002420,3.24e-08,18;CL:0002419,3.24e-08,18;CL:0000790,3.24e-08,18;CL:0000453,3.52e-08,5;CL:0000838,8.03e-08,52;CL:0000542,1.17e-07,53;CL:0000051,1.17e-07,53;CL:0000840,5.93e-07,5;CL:0001029,5.93e-07,5;CL:0000624,7.09e-07,6;CL:0000763,8.30e-07,108;CL:0000049,8.30e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.67e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,1.18009283054671,1.15148819429164,1.08371286321253,0,0,0,0,0,0.587200878669695,0,0,0.868043482863407,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,9.25199300053181,3.92355994087075,0,1.37696839079683,1.17903228824749,0.822405995998037,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,3.20928234940209,0.724122019413995,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0,0.357198913136319,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.352303495931295,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,20.1108272074549,10.9531164596891,12.7504857760644,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,1.37921532141349,3.23441362289276,1.41177339907723,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.409074730008619,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0,0.313932918407225,0,0.284609546029793,0,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.240476460754601,0.213452994739353,0.799238438328521,0,0,0,0,0,0.235694034616795,0,0.209205692624666,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0.83088067605837,1.1248694577575,6.1904156364636,0,0,0,0.314727528809989,0.633602019116439,0,0.383830394638891,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,2.72008901684737,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0.690359926060101,0.397832444232549,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.533636729388577,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p28@LMNA | |||
}} |
Revision as of 21:22, 10 January 2014
Short description: | p28@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_LMNA_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -269bp_to_ENST00000347559, ENST00000361308, NM_005572, NM_170707, NM_170708, uc001fng.2, uc001fnh.2, uc001fni.2_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | P02545 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data