FFCP PHASE1:Hg19::chr1:182992362..182992402,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6492 | |||
|TSSclassifier=weak | |||
|UniProt=P11047,Q6NVY8 | |||
|association_with_transcript=-192bp_to_NM_002293,uc001gpx.2,uc001gpy.3_5end | |||
|description=CAGE_peak_2_at_LAMC1_5end | |||
|id=chr1:182992362..182992402,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.25e-17!180;CL:0000057!1.76e-13!75;CL:0000220!3.64e-10!246;CL:0000222!3.81e-10!119;CL:0002321!8.34e-10!248;CL:0000680!3.31e-08!57;CL:0000056!3.31e-08!57;CL:0000355!3.31e-08!57;CL:0000187!4.29e-08!54;CL:0000183!2.10e-07!59;CL:0000136!5.66e-07!15;CL:0000192!7.70e-07!42;CL:0000514!7.70e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.07e-08;55!CL:0000723;5.16e-07;61!CL:0000048;8.75e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.68e-14,76;CL:0000222,1.43e-10,121;CL:0002321,5.65e-10,250;CL:0000680,1.32e-08,58;CL:0000056,1.32e-08,58;CL:0000355,1.32e-08,58;CL:0000187,1.69e-08,55;CL:0000192,3.06e-07,43;CL:0000514,3.06e-07,43;CL:0000136,5.37e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.44e-15!216;UBERON:0003104!3.60e-13!238;UBERON:0009142!3.60e-13!238;UBERON:0000468!5.83e-13!659;UBERON:0005256!1.15e-12!143;UBERON:0004872!1.49e-11!84;UBERON:0003914!1.60e-11!118;UBERON:0000475!8.99e-11!365;UBERON:0002049!2.10e-10!79;UBERON:0007798!2.10e-10!79;UBERON:0003102!3.01e-10!95;UBERON:0000481!3.91e-10!347;UBERON:0000490!5.01e-10!138;UBERON:0000467!6.19e-10!625;UBERON:0000914!6.61e-10!83;UBERON:0002329!6.61e-10!83;UBERON:0003077!6.61e-10!83;UBERON:0003059!6.61e-10!83;UBERON:0007282!6.61e-10!83;UBERON:0009618!6.61e-10!83;UBERON:0007285!6.61e-10!83;UBERON:0000480!1.04e-09!626;UBERON:0000486!1.99e-09!82;UBERON:0004923!3.38e-09!57;UBERON:0000926!3.68e-09!448;UBERON:0004120!3.68e-09!448;UBERON:0006603!3.68e-09!448;UBERON:0000055!6.07e-09!69;UBERON:0004290!6.77e-09!70;UBERON:0002385!6.84e-09!63;UBERON:0001015!6.84e-09!63;UBERON:0000383!6.84e-09!63;UBERON:0001134!1.67e-08!61;UBERON:0002036!1.67e-08!61;UBERON:0003082!1.67e-08!61;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0004119!2.92e-08!169;UBERON:0000925!2.92e-08!169;UBERON:0006595!2.92e-08!169;UBERON:0001009!1.31e-07!113;UBERON:0001007!3.67e-07!155;UBERON:0001555!3.67e-07!155;UBERON:0007026!3.67e-07!155;UBERON:0004535!4.72e-07!110;UBERON:0000477!4.94e-07!286;UBERON:0000466!7.22e-07!126;UBERON:0005156!7.44e-07!59;UBERON:0000990!7.44e-07!59;UBERON:0001637!7.85e-07!42;UBERON:0003509!7.85e-07!42;UBERON:0004572!7.85e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.49e-14,199;UBERON:0003104,3.44e-14,160;UBERON:0009142,3.44e-14,160;UBERON:0005256,1.52e-11,122;UBERON:0003914,2.97e-11,117;UBERON:0004872,3.63e-11,83;UBERON:0000490,4.81e-11,148;UBERON:0002049,5.05e-10,78;UBERON:0007798,5.05e-10,78;UBERON:0003102,6.09e-10,99;UBERON:0004923,7.93e-10,66;UBERON:0000486,8.11e-10,83;UBERON:0002385,2.69e-09,64;UBERON:0001015,2.69e-09,64;UBERON:0000383,2.69e-09,64;UBERON:0002329,2.73e-09,71;UBERON:0003059,2.73e-09,71;UBERON:0007282,2.73e-09,71;UBERON:0004290,2.73e-09,71;UBERON:0009618,2.73e-09,71;UBERON:0007524,5.09e-09,73;UBERON:0007503,6.02e-09,78;UBERON:0001134,6.66e-09,62;UBERON:0002036,6.66e-09,62;UBERON:0003082,6.66e-09,62;UBERON:0003077,7.10e-09,72;UBERON:0007285,7.10e-09,72;UBERON:0004119,8.26e-09,160;UBERON:0000925,8.26e-09,160;UBERON:0006595,8.26e-09,160;UBERON:0000055,1.67e-08,68;UBERON:0007500,4.30e-08,59;UBERON:0001981,4.30e-08,59;UBERON:0004537,4.30e-08,59;UBERON:0006965,4.30e-08,59;UBERON:0001007,2.06e-07,145;UBERON:0001555,2.06e-07,145;UBERON:0007026,2.06e-07,145;UBERON:0001009,4.35e-07,112;UBERON:0005156,7.06e-07,59;UBERON:0000990,7.06e-07,59;UBERON:0001637,7.45e-07,42;UBERON:0003509,7.45e-07,42;UBERON:0004572,7.45e-07,42 | |||
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| |||
|short_description=p2@LAMC1 | |||
}} |
Revision as of 22:38, 10 January 2014
Short description: | p2@LAMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAMC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -192bp_to_NM_002293, uc001gpx.2, uc001gpy.3_5end |
EntrezGene: | LAMC1 |
HGNC: | 6492 |
UniProt: | P11047Q6NVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.68e-14 | 76 |
mesodermal cell | 1.43e-10 | 121 |
embryonic cell | 5.65e-10 | 250 |
muscle precursor cell | 1.32e-08 | 58 |
myoblast | 1.32e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-08 | 58 |
muscle cell | 1.69e-08 | 55 |
smooth muscle cell | 3.06e-07 | 43 |
smooth muscle myoblast | 3.06e-07 | 43 |
fat cell | 5.37e-07 | 15 |