FFCP PHASE1:Hg19::chr1:242687612..242687622,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26879 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N7P1 | |||
|association_with_transcript=82bp_to_uc001hzn.1_5end | |||
|description=CAGE_peak_8_at_PLD5_5end | |||
|id=chr1:242687612..242687622,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.30e-26;2!CL:0000242;6.30e-26;2!CL:0000333;3.10e-11;5!CL:0000312;3.10e-11;5!CL:0000240;1.38e-09;6!CL:0000311;1.38e-09;6!CL:0000079;1.38e-09;6!CL:0000237;1.38e-09;6!CL:0000362;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.56e-26,2;CL:0000312,2.94e-11,5;CL:0000240,1.32e-09,6;CL:0000311,1.32e-09,6;CL:0000079,1.32e-09,6;CL:0000237,1.32e-09,6;CL:0000036,1.32e-09,6;CL:0000357,1.32e-09,6;CL:0000114,1.32e-09,6;CL:0000362,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.35e-66;3!CL:0000357;1.38e-09;6!CL:0000114;1.38e-09;6 | |||
|ontology_enrichment_disease=DOID:171!4.33e-10!10;DOID:169!3.38e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-34!94;UBERON:0001016!1.19e-34!94;UBERON:0001049!2.23e-34!57;UBERON:0005068!2.23e-34!57;UBERON:0006241!2.23e-34!57;UBERON:0007135!2.23e-34!57;UBERON:0002346!7.10e-31!90;UBERON:0002616!1.89e-30!59;UBERON:0001017!2.41e-30!82;UBERON:0005743!2.55e-30!86;UBERON:0007023!5.03e-30!115;UBERON:0003075!1.28e-28!86;UBERON:0007284!1.28e-28!86;UBERON:0002780!5.38e-25!41;UBERON:0001890!5.38e-25!41;UBERON:0006240!5.38e-25!41;UBERON:0000955!1.84e-24!69;UBERON:0006238!1.84e-24!69;UBERON:0003080!2.84e-24!42;UBERON:0000924!2.31e-22!173;UBERON:0006601!2.31e-22!173;UBERON:0004121!1.46e-20!169;UBERON:0001893!9.02e-20!34;UBERON:0003056!3.77e-18!61;UBERON:0002791!4.68e-18!33;UBERON:0002020!2.85e-17!34;UBERON:0003528!2.85e-17!34;UBERON:0001869!2.40e-16!32;UBERON:0000033!1.73e-13!123;UBERON:0001950!7.72e-13!20;UBERON:0000153!1.70e-12!129;UBERON:0007811!1.70e-12!129;UBERON:0002619!1.63e-11!22;UBERON:0003076!3.63e-11!15;UBERON:0003057!3.63e-11!15;UBERON:0004733!4.72e-11!12;UBERON:0002028!4.72e-11!12;UBERON:0007277!4.72e-11!12;UBERON:0004732!4.14e-10!13;UBERON:0000956!6.52e-10!25;UBERON:0000203!6.52e-10!25;UBERON:0002308!7.25e-10!9;UBERON:0000125!7.25e-10!9;UBERON:0000013!7.38e-10!5;UBERON:0002410!7.38e-10!5;UBERON:0002420!9.92e-10!9;UBERON:0007245!9.92e-10!9;UBERON:0010009!9.92e-10!9;UBERON:0010011!9.92e-10!9;UBERON:0000454!9.92e-10!9;UBERON:0009663!4.85e-09!7;UBERON:0002298!1.81e-08!8;UBERON:0002680!4.45e-08!9;UBERON:0001895!4.45e-08!9;UBERON:0010092!4.45e-08!9;UBERON:0000025!6.62e-08!194;UBERON:0000200!2.13e-07!6;UBERON:0001894!9.30e-07!7;UBERON:0006222!9.30e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.35e-34;6!UBERON:0002680;5.74e-23;9!UBERON:0001895;5.74e-23;9!UBERON:0004733;1.57e-17;12!UBERON:0002028;1.57e-17;12!UBERON:0004732;2.84e-16;13!UBERON:0000013;3.10e-11;5!UBERON:0002410;3.10e-11;5!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.17e-33,6;UBERON:0006215,1.17e-33,6;UBERON:0002680,7.17e-23,9;UBERON:0001895,7.17e-23,9;UBERON:0010092,7.17e-23,9;UBERON:0004733,1.85e-17,12;UBERON:0002028,1.85e-17,12;UBERON:0007277,1.85e-17,12;UBERON:0004732,3.31e-16,13;UBERON:0003076,3.36e-14,15;UBERON:0003057,3.36e-14,15;UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0000010,7.48e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,1.52581736317083,1.21637185924347,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0.83088067605837,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.76736622782191,1.94084660514027,0.629063767423586,0.327628914576042,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.611727596791485,0.460409414939944,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p8@PLD5 | |||
}} |
Revision as of 01:03, 11 January 2014
Short description: | p8@PLD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PLD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 82bp_to_uc001hzn.1_5end |
EntrezGene: | PLD5 |
HGNC: | 26879 |
UniProt: | Q8N7P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.56e-26 | 2 |
keratinocyte | 2.94e-11 | 5 |
stratified squamous epithelial cell | 1.32e-09 | 6 |
keratin accumulating cell | 1.32e-09 | 6 |
stratified epithelial cell | 1.32e-09 | 6 |
keratinizing barrier epithelial cell | 1.32e-09 | 6 |
epithelial fate stem cell | 1.32e-09 | 6 |
stratified epithelial stem cell | 1.32e-09 | 6 |
surface ectodermal cell | 1.32e-09 | 6 |
epidermal cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.17e-33 | 6 |
rhombic lip | 1.17e-33 | 6 |
regional part of metencephalon | 7.17e-23 | 9 |
metencephalon | 7.17e-23 | 9 |
future metencephalon | 7.17e-23 | 9 |
segmental subdivision of hindbrain | 1.85e-17 | 12 |
hindbrain | 1.85e-17 | 12 |
presumptive hindbrain | 1.85e-17 | 12 |
segmental subdivision of nervous system | 3.31e-16 | 13 |
posterior neural tube | 3.36e-14 | 15 |
chordal neural plate | 3.36e-14 | 15 |
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
peripheral nervous system | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-09 | 6 |