FFCP PHASE1:Hg19::chr10:71075516..71075537,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4922 | |||
|TSSclassifier=weak | |||
|UniProt=B1AR63 | |||
|association_with_transcript=-3bp_to_ENST00000436817_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_HK1_5end | |||
|id=chr10:71075516..71075537,+ | |||
|ontology_enrichment_celltype=CL:0000569!4.54e-08!4;CL:0000011!4.54e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.36e-15;2!CL:0000558;7.36e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.36e-15,2;CL:0000765,7.36e-15,2;CL:0000050,7.36e-15,2;CL:0000038,7.36e-15,2;CL:0000558,7.36e-15,2;CL:0000547,7.36e-15,2;CL:0000549,7.36e-15,2;CL:0000550,7.36e-15,2;CL:0000552,7.36e-15,2;CL:0000763,7.47e-08,108;CL:0000049,7.47e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.23e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.52e-30;8!DOID:8692;1.71e-19;31!DOID:1240;2.80e-12;39!DOID:8552;4.98e-08;1!DOID:2531;1.74e-07;51!DOID:0060083;1.74e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.38e-30,8;DOID:8692,5.91e-20,31;DOID:1240,1.69e-15,39;DOID:2531,1.95e-11,51;DOID:0060083,1.95e-11,51;DOID:8552,4.99e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.99e-18!15;UBERON:0000179!4.99e-18!15;UBERON:0000463!4.99e-18!15;UBERON:0001009!3.15e-08!113;UBERON:0004535!6.81e-08!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.10e-33;15!UBERON:0000179;6.10e-33;15!UBERON:0000463;6.10e-33;15!UBERON:0002390;5.73e-17;32!UBERON:0002193;1.53e-08;42!UBERON:0002426;1.75e-07;1!UBERON:0003831;1.75e-07;1!UBERON:0003898;1.75e-07;1!UBERON:0004830;1.75e-07;1!UBERON:0003830;1.75e-07;1!UBERON:0005175;1.75e-07;1!UBERON:0001774;1.75e-07;1!UBERON:0001103;1.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.24e-33,15;UBERON:0000179,5.24e-33,15;UBERON:0000463,5.24e-33,15;UBERON:0002426,1.54e-07,1;UBERON:0003831,1.54e-07,1;UBERON:0003898,1.54e-07,1;UBERON:0004830,1.54e-07,1;UBERON:0003830,1.54e-07,1;UBERON:0005175,1.54e-07,1;UBERON:0001774,1.54e-07,1;UBERON:0001103,1.54e-07,1;UBERON:0010084,1.54e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,2.0251139823042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102.394362393651,101.436954997661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0,0,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58192370155386,5.35246044999663,4.5571774973933,1.42939065274673,1.23408681925858,2.59389324477087,3.7802200606668,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3974297373147,24.6174797895425,9.19549306818343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,2.42345639906385,0,0,0,0,0,0,16.6211681900156,50.5334279782485,49.0156335794349,49.3395465708978,49.7154779737365,27.0192184266644,0,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0,0.123563938946503,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.67952103036807,0.418411385249333,0,0.577901179803038,0,0,0,0,0.262887354279314,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,7.55251190893918,0,0,0,6.62534444561107,0,0,0,0,0.427149650270779,2.51526888159466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0.915360273587694,0.453692771289717,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0.453411851024545,0.694567422971502,0,0,0,0,0,0.192914038270915,2.36519416914302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,4.31867849422967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.917899467677836,0.534434810531121,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0.248298857183432,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@HK1 | |||
}} |
Revision as of 03:16, 11 January 2014
Short description: | p3@HK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HK1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -3bp_to_ENST00000436817_5end |
EntrezGene: | HK1 |
HGNC: | 4922 |
UniProt: | B1AR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.36e-15 | 2 |
erythroblast | 7.36e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 7.36e-15 | 2 |
erythroid progenitor cell | 7.36e-15 | 2 |
reticulocyte | 7.36e-15 | 2 |
proerythroblast | 7.36e-15 | 2 |
basophilic erythroblast | 7.36e-15 | 2 |
polychromatophilic erythroblast | 7.36e-15 | 2 |
orthochromatic erythroblast | 7.36e-15 | 2 |
myeloid cell | 7.47e-08 | 108 |
common myeloid progenitor | 7.47e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 5.24e-33 | 15 |
haemolymphatic fluid | 5.24e-33 | 15 |
organism substance | 5.24e-33 | 15 |
chest muscle | 1.54e-07 | 1 |
respiratory system muscle | 1.54e-07 | 1 |
skeletal muscle of trunk | 1.54e-07 | 1 |
respiratory system skeletal muscle | 1.54e-07 | 1 |
thoracic segment muscle | 1.54e-07 | 1 |
chest organ | 1.54e-07 | 1 |
muscle of trunk | 1.54e-07 | 1 |
diaphragm | 1.54e-07 | 1 |
future diaphragm | 1.54e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.38e-30 | 8 |
myeloid leukemia | 5.91e-20 | 31 |
leukemia | 1.69e-15 | 39 |
hematologic cancer | 1.95e-11 | 51 |
immune system cancer | 1.95e-11 | 51 |
chronic myeloid leukemia | 4.99e-08 | 1 |