FFCP PHASE1:Hg19::chr10:98497250..98497261,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:98497250..98497261,+ | |||
|id=chr10:98497250..98497261,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.47e-20!172;CL:0000566!8.47e-20!172;CL:0000988!4.70e-18!182;CL:0002032!2.32e-16!165;CL:0000837!2.32e-16!165;CL:0002322!9.71e-14!5;CL:0000738!6.07e-12!140;CL:0000763!1.73e-11!112;CL:0000049!1.73e-11!112;CL:0000945!6.79e-11!24;CL:0000826!6.79e-11!24;CL:0000784!1.11e-09!3;CL:0002031!1.71e-08!124;CL:0002087!2.57e-08!119;CL:0000039!8.47e-07!7;CL:0000586!8.47e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.59e-24;3!CL:0000039;1.99e-17;7!CL:0000586;1.99e-17;7!CL:0002322;7.95e-14;5!CL:0000235;1.30e-11;6!CL:0000817;4.18e-09;1!CL:0000946;1.37e-08;1!CL:0000037;1.37e-08;1!CL:0001024;1.37e-08;1!CL:0000786;1.37e-08;1!CL:0000148;3.68e-07;10!CL:0000451;6.39e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.97e-24,3;CL:0000039,1.58e-17,7;CL:0000586,1.58e-17,7;CL:0002322,8.89e-14,5;CL:0000235,1.32e-11,6;CL:0000817,6.29e-11,3;CL:0000037,1.61e-09,168;CL:0000988,7.10e-09,177;CL:0001024,1.65e-08,1;CL:0000946,1.78e-08,1;CL:0000786,1.78e-08,1;CL:0000980,1.78e-08,1;CL:0000148,3.88e-07,10;CL:0000541,3.88e-07,10;CL:0000451,6.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.94e-12;10!UBERON:0005564;2.94e-12;10 | |||
|ontology_enrichment_disease=DOID:2531!5.72e-07!51;DOID:0060083!5.72e-07!51;DOID:8692!9.64e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.48e-08;22!DOID:2994;2.48e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.44e-08,22;DOID:2994,2.44e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.37e-09!7;UBERON:0002106!1.53e-08!3;UBERON:0004854!1.53e-08!3;UBERON:0009034!1.53e-08!3;UBERON:0002095!1.53e-08!3;UBERON:0004782!1.53e-08!3;UBERON:0003281!1.53e-08!3;UBERON:0009664!1.53e-08!3;UBERON:0002296!1.53e-08!3;UBERON:0005602!1.53e-08!3;UBERON:0001179!1.53e-08!3;UBERON:0006293!1.53e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.82e-15;8!UBERON:0003135;3.70e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.30e-15,8;UBERON:0003135,3.20e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.57470412614962,1.02324015707783,0,0.767658796194425,0,0,0,0,0.232401601740905,0.995184627411951,1.17440175733939,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,5.48528435902286,6.29194401858141,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.662648841607426,2.20768491452085,1.0366105501537,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,1.18904929830983,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0,0,0,3.75099953738757,0,0,1.1974762285969,3.06408592211787,0.635020748171649,1.29848776109822,3.36956613736151,0,0,2.50634477090067,0.846458889008016,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,1.15233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,2.06764619555678,0.773494655682926,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09265571963696,0,1.32585478664576,2.40495664739004,3.58390108185895,2.005660314339,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.875576689189638,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr10:98497250..98497261,+ | |||
}} |
Revision as of 04:23, 11 January 2014
Short description: | p@chr10:98497250..98497261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98497250..98497261, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.97e-24 | 3 |
germ line cell | 1.58e-17 | 7 |
germ cell | 1.58e-17 | 7 |
embryonic stem cell | 8.89e-14 | 5 |
macrophage | 1.32e-11 | 6 |
precursor B cell | 6.29e-11 | 3 |
hematopoietic stem cell | 1.61e-09 | 168 |
hematopoietic cell | 7.10e-09 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.65e-08 | 1 |
antibody secreting cell | 1.78e-08 | 1 |
plasma cell | 1.78e-08 | 1 |
plasmablast | 1.78e-08 | 1 |
melanocyte | 3.88e-07 | 10 |
melanoblast | 3.88e-07 | 10 |
dendritic cell | 6.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 2.30e-15 | 8 |
male reproductive organ | 3.20e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.44e-08 | 22 |
germ cell cancer | 2.44e-08 | 22 |