FFCP PHASE1:Hg19::chr10:120101804..120101843,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25794 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H8W3,F2Z2Y3 | |||
|association_with_transcript=0bp_to_ENST00000369172,ENST00000369183,ENST00000469758,ENST00000470476,ENST00000487269,NM_001134672,NM_022063,uc001ldo.2,uc010qss.1_5end | |||
|description=CAGE_peak_1_at_FAM204A_5end | |||
|id=chr10:120101804..120101843,- | |||
|ontology_enrichment_celltype=CL:0002057!7.63e-10!42;CL:0000839!1.22e-09!70;CL:0000860!3.34e-09!45;CL:0000766!1.71e-08!76;CL:0002031!3.05e-08!124;CL:0000557!7.49e-08!71;CL:0000738!7.65e-08!140;CL:0000037!1.31e-07!172;CL:0000566!1.31e-07!172;CL:0002194!2.75e-07!63;CL:0000576!2.75e-07!63;CL:0000040!2.75e-07!63;CL:0000559!2.75e-07!63;CL:0002009!6.10e-07!65;CL:0002087!6.10e-07!119;CL:0002032!6.22e-07!165;CL:0000837!6.22e-07!165;CL:0000763!9.16e-07!112;CL:0000049!9.16e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.02e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.02e-10,66;CL:0000860,7.63e-10,42;CL:0002057,7.63e-10,42;CL:0000766,3.85e-09,72;CL:0002031,1.15e-08,120;CL:0000557,1.72e-08,67;CL:0000738,3.27e-08,136;CL:0000473,4.59e-08,48;CL:0000234,4.59e-08,48;CL:0002194,6.03e-08,59;CL:0000576,6.03e-08,59;CL:0000040,6.03e-08,59;CL:0000559,6.03e-08,59;CL:0000037,6.48e-08,168;CL:0002009,1.49e-07,61;CL:0002087,2.56e-07,115;CL:0002032,3.17e-07,161;CL:0000837,3.17e-07,161;CL:0000763,3.77e-07,108;CL:0000049,3.77e-07,108;CL:0000988,4.77e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-11!115;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102;UBERON:0004765!1.62e-07!101;UBERON:0001434!1.62e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.33e-11,114;UBERON:0002390,4.04e-08,98;UBERON:0003061,4.04e-08,98;UBERON:0001434,2.23e-07,100;UBERON:0002371,3.28e-07,76;UBERON:0001474,3.85e-07,82;UBERON:0004765,7.63e-07,90 | |||
|phase1_expression=42.3310623700397,28.0471686297188,39.6081875509679,36.0263874071269,36.6508097430376,34.8935409640147,17.7309914717817,37.271472532183,17.2382514611893,15.4812379995951,5.58240934377942,17.693751142544,9.23184423799587,38.8626348294546,23.8606110524099,34.9609076154923,28.9293373451509,20.4486825308465,24.3966399395254,17.8525534211342,7.75202626728161,5.01527554364941,40.0730381983479,26.8273873142853,25.3596131981502,34.3096191808301,39.2440817570741,38.2534397184481,32.2558707016101,60.6450448993596,56.0434366404195,16.5495820406207,9.93979531968225,28.1013047726759,20.4513409531996,40.9447389563774,37.5808562348604,71.4654077006122,43.919233995961,42.3171197895911,40.7526163116662,36.2760905941257,40.6969396862015,40.1299139031599,40.0548500310138,46.3335556868729,36.9562168680039,32.4822631537242,40.5715345872586,33.3723175093695,39.1925880989524,64.3231665296952,32.4060939892421,43.2474738001163,44.6907405761328,36.5190138712653,42.3004532589661,58.8775529246122,41.3213254700718,44.9300637906531,47.310947309129,44.20007422502,35.9034583718937,39.2126770490079,45.2726412260591,33.4757282567772,40.4834461847124,38.4410457842817,43.8045651472969,67.3285418585861,31.4807741369352,53.4002572181969,65.5077142002631,76.8969242175468,76.5375479874157,77.5736988380991,58.9725313519099,72.6856161352891,85.1845609494525,61.5627526481097,79.1688375252379,81.1028842714975,43.9990611153307,51.8831680699025,43.5859534393142,43.9532129243502,42.0415786387813,52.302472035858,44.9510513493706,52.472956499445,35.2912040847858,35.2342313622563,36.3159566718967,39.6513985737078,71.1845874986551,40.8245331401369,43.0794396549294,25.1526888159465,26.9337963689357,40.6263183799348,39.1106719960308,33.1413464014313,31.1722765452658,37.211092599648,40.6556152315275,44.0852450221406,49.0154993414678,23.5688028295242,23.4106825607781,27.9544437826249,31.7802520453726,51.5849492608393,41.2236645590528,55.91603307075,33.4513676175926,40.224816657636,32.9569624497652,32.9882347663325,54.1462140921736,36.9535880615952,49.4823424930878,45.621698133522,49.689789295665,64.249278799518,44.9750615588445,38.1211375790867,42.6986558398944,36.2892137804518,20.3254548795466,28.5304075649114,12.1903433156981,32.1936412657745,39.3816690478073,62.1675342101454,36.5976674764199,30.7074620196946,58.0558741347302,20.9252994230133,38.8538098544319,26.6075276955077,24.1545660656097,34.643965469145,9.10738220731355,12.977455497455,34.7265711210511,31.8657419257659,19.4118622357543,52.7064279714806,48.6195674163109,62.0334027220373,27.2304498092386,23.2263340678654,24.2998351125316,32.2225526896685,21.3944712467052,22.2845613971455,20.2725117540706,28.9426770269648,43.4034840477786,52.2164155912886,27.392393563422,34.2122447573331,18.3046543161127,43.7519065611584,15.3926970097534,41.9708722935175,36.3737583654395,28.8285390037305,22.9974956198825,16.1375162126582,15.3889464901542,26.3560834872127,38.7780264148325,6.54141078213801,38.2668402805395,38.875567081026,31.2485666719196,22.9469296599051,25.5361235182817,28.0338800071154,20.2823091886439,19.4867363249556,34.5444249293741,37.7189881795127,35.1443091693936,19.827823021486,26.5040925260799,16.4025002283658,29.9673673757108,35.9397247573003,31.3842229158782,41.1020745253177,40.630109036401,42.5565944307813,45.1180718473314,30.708579327942,41.5369640326577,48.7081171485642,25.4684937156914,6.37112953356618,5.74894513452991,46.2924313373682,30.6540373686312,53.7504384039315,41.7028739836796,25.7449748471176,28.0945170155336,35.5042733290866,25.4733282678184,62.3587575350217,56.3738857084435,29.4089274162714,65.3353035371703,30.9168648054755,51.1821354911872,31.3923977968755,65.1853564528419,33.5736919744672,52.9286917193221,65.7899451252564,33.3709016965617,67.6046579107466,41.8814663006904,37.106083807353,34.9115034356268,31.5485054927904,17.3202662704025,18.289108028365,20.7987157736438,26.1225858638734,18.9240638156721,19.7087773900948,15.6449532329816,21.2269509603652,12.4321429217232,29.2551794660147,19.4907460050788,31.4696088105985,29.3337360735897,35.4286213928719,31.2131942832675,31.5925193933989,31.0824511035537,32.0898513421191,31.3954344200554,37.7052213807463,11.0723318193697,7.01208869017229,9.8777762719536,5.88034845542168,31.6887587054577,34.3989525837169,27.767125614026,31.3438800584402,28.2873408649161,30.5390702331375,18.6575485194663,28.1004383144049,44.7353927231757,38.1464394053142,16.2904152655162,8.31947828223663,24.5363281442965,37.793312021875,34.6355647995674,26.1303270447544,18.982406015641,32.1529517276471,17.3844967551041,20.6036678902769,36.4401169009348,30.4205544681009,25.71319107595,37.4935335947108,54.0902452800328,56.0011634107427,67.0793335044334,60.1612252723901,16.8688378832693,56.6562723580335,42.439345194375,55.3566068493861,59.5215407612051,53.5267917727851,41.4006270784942,15.2795370223311,11.7217447210047,10.2643467613623,33.0076251577668,27.6315613216404,32.0125604546248,29.7147373515206,23.1058836481638,38.3559234843569,36.84243899096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| |||
|short_description=p1@FAM204A | |||
}} |
Revision as of 05:14, 11 January 2014
Short description: | p1@FAM204A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM204A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369172, ENST00000369183, ENST00000469758, ENST00000470476, ENST00000487269, NM_001134672, NM_022063, uc001ldo.2, uc010qss.1_5end |
EntrezGene: | FAM204A |
HGNC: | 25794 |
UniProt: | Q9H8W3F2Z2Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.02e-10 | 66 |
classical monocyte | 7.63e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.63e-10 | 42 |
myeloid leukocyte | 3.85e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
granulocyte monocyte progenitor cell | 1.72e-08 | 67 |
leukocyte | 3.27e-08 | 136 |
defensive cell | 4.59e-08 | 48 |
phagocyte | 4.59e-08 | 48 |
monopoietic cell | 6.03e-08 | 59 |
monocyte | 6.03e-08 | 59 |
monoblast | 6.03e-08 | 59 |
promonocyte | 6.03e-08 | 59 |
hematopoietic stem cell | 6.48e-08 | 168 |
macrophage dendritic cell progenitor | 1.49e-07 | 61 |
nongranular leukocyte | 2.56e-07 | 115 |
hematopoietic oligopotent progenitor cell | 3.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-07 | 161 |
myeloid cell | 3.77e-07 | 108 |
common myeloid progenitor | 3.77e-07 | 108 |
hematopoietic cell | 4.77e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.33e-11 | 114 |
hematopoietic system | 4.04e-08 | 98 |
blood island | 4.04e-08 | 98 |
skeletal system | 2.23e-07 | 100 |
bone marrow | 3.28e-07 | 76 |
bone element | 3.85e-07 | 82 |
skeletal element | 7.63e-07 | 90 |