FFCP PHASE1:Hg19::chr11:3968515..3968532,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11386 | |||
|TSSclassifier=strong | |||
|UniProt=E9PR07 | |||
|association_with_transcript=-40bp_to_ENST00000532990_5end | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_3_at_STIM1_5end | |||
|id=chr11:3968515..3968532,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.73e-35!18;CL:0000789!2.73e-35!18;CL:0002420!2.73e-35!18;CL:0002419!2.73e-35!18;CL:0000790!2.73e-35!18;CL:0000084!1.78e-30!25;CL:0000827!1.78e-30!25;CL:0000625!3.99e-21!11;CL:0000838!5.78e-20!52;CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000738!1.38e-14!140;CL:0000624!5.47e-14!6;CL:0000037!8.42e-11!172;CL:0000566!8.42e-11!172;CL:0000988!1.13e-09!182;CL:0002087!1.36e-09!119;CL:0002031!4.90e-08!124;CL:0002032!6.57e-08!165;CL:0000837!6.57e-08!165;CL:0000898!7.35e-08!3;CL:0000623!8.08e-08!3;CL:0000825!8.08e-08!3;CL:0000842!1.73e-07!3;CL:0000767!1.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.79e-21;18!CL:0000789;1.79e-21;18!CL:0002419;1.79e-21;18!CL:0000625;2.96e-20;11!CL:0000084;3.95e-19;25!CL:0000895;5.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.48e-21,18;CL:0000789,1.48e-21,18;CL:0002420,1.48e-21,18;CL:0002419,1.48e-21,18;CL:0000790,1.48e-21,18;CL:0000625,2.67e-20,11;CL:0000084,3.31e-19,25;CL:0000827,3.31e-19,25;CL:0000838,1.52e-10,52;CL:0000542,2.58e-10,53;CL:0000051,2.58e-10,53;CL:0000810,5.33e-08,1;CL:0000895,5.33e-08,1;CL:0002436,5.33e-08,1;CL:0002427,5.33e-08,1;CL:0002428,5.33e-08,1;CL:0002429,5.33e-08,1;CL:0002433,5.33e-08,1;CL:0002431,5.33e-08,1;CL:0002432,5.33e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.79e-21;18!CL:0002427;5.70e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.57e-11!4;UBERON:0005058!9.57e-11!4;UBERON:0009113!9.57e-11!4;UBERON:0003295!9.57e-11!4;UBERON:0005562!9.57e-11!4;UBERON:0004177!6.24e-09!7;UBERON:0003351!4.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.35e-15;2!UBERON:0005058;7.35e-15;2!UBERON:0009113;7.35e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.57e-16,4;UBERON:0005058,5.57e-16,4;UBERON:0009113,5.57e-16,4;UBERON:0003295,5.57e-16,4;UBERON:0005562,5.57e-16,4;UBERON:0003351,8.03e-11,6;UBERON:0004177,2.43e-09,7;UBERON:0005057,2.43e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,1.37696839079683,0.393010762749165,0.616804496998528,2.17342444007882,0.651844533267181,0.946895611469467,1.94826728407911,4.34500781852177,0.294605907474837,1.55073726208535,1.08321545506006,2.43373507478783,3.51160238411671,2.13769275984779,2.21080014228679,0.869409257205157,3.85545064221357,2.94294910898684,1.04535523804977,2.03956816855619,2.29932296161153,4.46715679127419,2.27717722817553,1.27426165729639,0,0.950452044448374,0.903450714466637,1.27986611154418,1.24930726552346,0.947109008176067,2.46338399076314,1.00803371612366,0.534880391567015,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0,0,0,0,0,0.497992903438899,1.27541018183058,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52347989343662,8.38008642994082,0,0.0636471582781649,0,0,0,0.336760265072938,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p3@STIM1 | |||
}} |
Revision as of 06:17, 11 January 2014
Short description: | p3@STIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STIM1_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | -40bp_to_ENST00000532990_5end |
EntrezGene: | STIM1 |
HGNC: | 11386 |
UniProt: | E9PR07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.48e-21 | 18 |
alpha-beta T cell | 1.48e-21 | 18 |
immature T cell | 1.48e-21 | 18 |
mature T cell | 1.48e-21 | 18 |
immature alpha-beta T cell | 1.48e-21 | 18 |
CD8-positive, alpha-beta T cell | 2.67e-20 | 11 |
T cell | 3.31e-19 | 25 |
pro-T cell | 3.31e-19 | 25 |
lymphoid lineage restricted progenitor cell | 1.52e-10 | 52 |
lymphocyte | 2.58e-10 | 53 |
common lymphoid progenitor | 2.58e-10 | 53 |
CD4-positive, alpha-beta thymocyte | 5.33e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.33e-08 | 1 |
mature CD4 single-positive thymocyte | 5.33e-08 | 1 |
resting double-positive thymocyte | 5.33e-08 | 1 |
double-positive blast | 5.33e-08 | 1 |
CD69-positive double-positive thymocyte | 5.33e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.33e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.33e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.57e-16 | 4 |
hemolymphoid system gland | 5.57e-16 | 4 |
thymic region | 5.57e-16 | 4 |
pharyngeal gland | 5.57e-16 | 4 |
thymus primordium | 5.57e-16 | 4 |
pharyngeal epithelium | 8.03e-11 | 6 |
hemopoietic organ | 2.43e-09 | 7 |
immune organ | 2.43e-09 | 7 |