FFCP PHASE1:Hg19::chr11:10590118..10590129,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14687 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z296 | |||
|association_with_transcript=0bp_to_ENST00000529598_5end | |||
|coexpression_cluster_id=C2091 | |||
|description=CAGE_peak_5_at_LYVE1_5end | |||
|id=chr11:10590118..10590129,- | |||
|ontology_enrichment_celltype=CL:0000115!4.23e-13!35;CL:0002139!2.77e-10!24;CL:0002078!3.71e-09!44;CL:0000071!1.86e-07!18;CL:0002546!1.86e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.68e-10;36!CL:0002144;2.40e-08;3!CL:0002188;6.39e-08;5!CL:0002139;6.91e-08;24!CL:0002618;4.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.25e-13,36;CL:0002078,1.83e-09,45;CL:0002144,2.50e-08,3;CL:0002188,5.45e-08,5;CL:0002139,6.67e-08,24;CL:0002618,5.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.42e-12;7!UBERON:0006603;3.14e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.03e-66!115;UBERON:0001049!2.24e-21!57;UBERON:0005068!2.24e-21!57;UBERON:0006241!2.24e-21!57;UBERON:0007135!2.24e-21!57;UBERON:0004111!3.65e-21!241;UBERON:0000025!2.37e-19!194;UBERON:0000477!1.45e-18!286;UBERON:0003080!2.57e-17!42;UBERON:0003075!4.56e-17!86;UBERON:0007284!4.56e-17!86;UBERON:0002616!1.61e-16!59;UBERON:0002780!3.08e-16!41;UBERON:0001890!3.08e-16!41;UBERON:0006240!3.08e-16!41;UBERON:0002346!9.33e-16!90;UBERON:0001017!4.22e-14!82;UBERON:0005743!8.11e-14!86;UBERON:0000955!2.42e-13!69;UBERON:0006238!2.42e-13!69;UBERON:0001893!5.99e-13!34;UBERON:0000073!2.46e-12!94;UBERON:0001016!2.46e-12!94;UBERON:0002791!2.87e-12!33;UBERON:0002020!7.18e-12!34;UBERON:0003528!7.18e-12!34;UBERON:0001869!1.99e-11!32;UBERON:0000483!3.72e-11!309;UBERON:0000119!7.71e-11!312;UBERON:0002619!1.89e-10!22;UBERON:0003056!2.17e-10!61;UBERON:0000468!3.71e-09!659;UBERON:0001950!7.24e-09!20;UBERON:0000481!8.94e-09!347;UBERON:0000956!9.06e-09!25;UBERON:0000203!9.06e-09!25;UBERON:0000467!2.08e-08!625;UBERON:0000480!2.43e-08!626;UBERON:0003103!2.88e-08!69;UBERON:0000064!3.46e-08!219;UBERON:0000153!3.75e-08!129;UBERON:0007811!3.75e-08!129;UBERON:0001986!1.86e-07!18;UBERON:0004638!1.86e-07!18;UBERON:0004852!1.86e-07!18;UBERON:0000062!2.23e-07!511;UBERON:0000033!3.38e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.40e-08;3!UBERON:0001915;2.40e-08;3!UBERON:0001982;2.40e-08;3!UBERON:0000922;1.58e-07;49!UBERON:0004151;2.12e-07;3!UBERON:0007023;2.15e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.89e-34,114;UBERON:0004111,4.69e-10,240;UBERON:0003887,4.13e-09,12;UBERON:0010523,2.50e-08,3;UBERON:0001915,2.50e-08,3;UBERON:0001982,2.50e-08,3;UBERON:0000025,2.68e-08,192;UBERON:0004151,2.35e-07,3;UBERON:0003103,3.11e-07,68;UBERON:0005103,3.35e-07,8;UBERON:0000083,3.35e-07,8;UBERON:0009201,3.35e-07,8;UBERON:0006553,3.35e-07,8;UBERON:0003074,3.35e-07,8;UBERON:0003060,3.35e-07,8;UBERON:0004921,6.72e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0.419499436209906,0,0,13.9545049951438,22.057508286576,6.02497102976406,4.43112248820062,31.9314284401775,6.10155143870424,0.735326160691737,0,4.28638695763583,1.79623498100936,1.12611480483322,0,0.949265659568129,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.3367054589803,1.40241773803446,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54933536283586,14.4579649485038,6.47747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00222306602623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73290495621912,0,0,0,0,0,9.37652347340122,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,2.19172787076177,1.65770349318689,0,0,0,0,0,0,0,7.10232520585922,0,0,0,0.463840490809256,0,0,0,5.07499702804355,0,0,0,0,0,0,0,1.32656082487949,0,0.995213339381022,0.295547618953547,0.219385397153973,0,0,1.46205491157214,0,0,0,0,6.38002319463839,0,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,5.21899630569701,4.27721101453538,0,0,0,0.404406797884062,4.01288823649394,0,0,0,0,0.789168805698781,1.20990716048664,0,6.19228480359182,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,3.4916045935831,0,2.71176888936639,0,0,0.253243183823515,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,2.19048606227189,0,0,0,3.90995361781156,0.229160424011684,1.43574604915363,0.399358000997982,0.858452096273142,4.68660060627932,2.41860500952215,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.182248669974074,0,1.49730843868477,2.6751839948849,0,0,0,2.1440859791201,7.28301167401975,0,0,0,0,0,0.082092520749339,0,0,3.95691030930823,1.32506888912221,0,1.19009341568421,0,0,3.84434685243701,23.2662371547506,4.97086866416635,7.93865634899121,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0.886068179966986,0,0.250381861413,1.14681839138014,2.21858103073705,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,2.48194083552549,0,0.781514011233092,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0.546974809018219,1.09651553371436,0.992422356778588,0,0,1.07140367175657,3.02655349996942,0.606965604236632,2.73194629621557,3.193285325855,0,0,0,0,0,0,3.53218917827313,0.314231179832004,0,3.65263488203798,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,2.66923297826242,1.1598144313382,3.39997695141398,0,0,0,0,0,0,3.08696632431779,1.5299169235277,0,1.96118657403124,0,0.392616934229891,1.18818560130834,0.8453114551668,0,27.3493201321374,35.7096699373618,0,0,0,0,1.46067277649303,0.458729283404541,1.00337708206016,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,1.24119595034274,1.70587185520785,1.90451545170992,0,1.92431614317159,0,5.91918571986934,3.63810940124795,2.17716747896961,5.81796611844978,0.740872583160463,4.08816570738255,3.99192427855216,0,0,0,0,2.34640942403454,0.611207220914332,2.03448089157869,9.32059483859718,8.4534993308231,0 | |||
|short_description=p5@LYVE1 | |||
}} |
Revision as of 06:35, 11 January 2014
Short description: | p5@LYVE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LYVE1_5end |
Coexpression cluster: | C2091_Hepatic_spleen_Endothelial_lung_lymph_adipose_acute |
Association with transcript: | 0bp_to_ENST00000529598_5end |
EntrezGene: | LYVE1 |
HGNC: | 14687 |
UniProt: | F2Z296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.25e-13 | 36 |
meso-epithelial cell | 1.83e-09 | 45 |
capillary endothelial cell | 2.50e-08 | 3 |
glomerular endothelial cell | 5.45e-08 | 5 |
endothelial cell of vascular tree | 6.67e-08 | 24 |
endothelial cell of umbilical vein | 5.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.89e-34 | 114 |
anatomical conduit | 4.69e-10 | 240 |
intraembryonic coelom | 4.13e-09 | 12 |
microcirculatory vessel | 2.50e-08 | 3 |
endothelium of capillary | 2.50e-08 | 3 |
capillary | 2.50e-08 | 3 |
tube | 2.68e-08 | 192 |
cardiac chamber | 2.35e-07 | 3 |
compound organ | 3.11e-07 | 68 |
mesonephric epithelium | 3.35e-07 | 8 |
mesonephric tubule | 3.35e-07 | 8 |
nephric duct | 3.35e-07 | 8 |
renal duct | 3.35e-07 | 8 |
mesonephric duct | 3.35e-07 | 8 |
pronephric duct | 3.35e-07 | 8 |
subdivision of digestive tract | 6.72e-07 | 118 |