FFCP PHASE1:Hg19::chr11:62572901..62572919,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8071 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBU9,E9PQA4 | |||
|association_with_transcript=0bp_to_ENST00000439713,ENST00000525576,ENST00000526163,ENST00000531131_5end | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_1_at_NXF1_5end | |||
|id=chr11:62572901..62572919,- | |||
|ontology_enrichment_celltype=CL:0000037!9.43e-41!172;CL:0000566!9.43e-41!172;CL:0000988!1.56e-40!182;CL:0000738!1.98e-40!140;CL:0002032!3.57e-37!165;CL:0000837!3.57e-37!165;CL:0002031!5.04e-31!124;CL:0002087!5.92e-29!119;CL:0000860!1.84e-26!45;CL:0002057!3.43e-26!42;CL:0000763!1.68e-24!112;CL:0000049!1.68e-24!112;CL:0000766!1.53e-22!76;CL:0000557!2.08e-19!71;CL:0000839!2.49e-18!70;CL:0002009!3.56e-17!65;CL:0002194!4.62e-16!63;CL:0000576!4.62e-16!63;CL:0000040!4.62e-16!63;CL:0000559!4.62e-16!63;CL:0000134!2.09e-12!358;CL:0002320!1.40e-11!365;CL:0000838!2.04e-11!52;CL:0000542!2.05e-11!53;CL:0000051!2.05e-11!53;CL:0000219!5.27e-11!390;CL:0000084!6.39e-09!25;CL:0000827!6.39e-09!25;CL:0000791!1.04e-08!18;CL:0000789!1.04e-08!18;CL:0002420!1.04e-08!18;CL:0002419!1.04e-08!18;CL:0000790!1.04e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.88e-19;33!CL:0002057;2.88e-19;33!CL:0000576;5.99e-15;48!CL:0000473;9.22e-12;39!CL:0000234;9.22e-12;39!CL:0000766;1.08e-11;69!CL:0002087;7.80e-11;104!CL:0000738;4.02e-09;136!CL:0000084;6.61e-09;25!CL:0000791;1.06e-08;18!CL:0000789;1.06e-08;18!CL:0002419;1.06e-08;18!CL:0000763;7.83e-08;100!CL:0000988;8.28e-08;177!CL:0000542;3.26e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.35e-41,168;CL:0000738,7.47e-41,136;CL:0000988,8.02e-41,177;CL:0002032,2.08e-37,161;CL:0000837,2.08e-37,161;CL:0002031,2.22e-31,120;CL:0002087,2.67e-29,115;CL:0000860,3.43e-26,42;CL:0002057,3.43e-26,42;CL:0000763,8.51e-25,108;CL:0000049,8.51e-25,108;CL:0000766,4.32e-23,72;CL:0000473,6.06e-20,48;CL:0000234,6.06e-20,48;CL:0000557,6.80e-20,67;CL:0000839,8.74e-19,66;CL:0002009,1.22e-17,61;CL:0002194,1.68e-16,59;CL:0000576,1.68e-16,59;CL:0000040,1.68e-16,59;CL:0000559,1.68e-16,59;CL:0000134,7.11e-12,354;CL:0000838,2.04e-11,52;CL:0000542,2.05e-11,53;CL:0000051,2.05e-11,53;CL:0002320,4.58e-11,361;CL:0000219,1.69e-10,386;CL:0000084,6.39e-09,25;CL:0000827,6.39e-09,25;CL:0000791,1.04e-08,18;CL:0000789,1.04e-08,18;CL:0002420,1.04e-08,18;CL:0002419,1.04e-08,18;CL:0000790,1.04e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-19;42!CL:0000790;1.06e-08;18!CL:0000049;1.65e-07;108!CL:0000051;3.26e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.33e-26!102;UBERON:0003061!5.33e-26!102;UBERON:0002193!1.31e-24!112;UBERON:0002371!5.86e-19!80;UBERON:0001474!3.94e-18!86;UBERON:0002405!1.09e-15!115;UBERON:0004765!4.38e-12!101;UBERON:0001434!4.38e-12!101;UBERON:0002384!3.63e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.12e-26,98;UBERON:0003061,2.12e-26,98;UBERON:0002193,6.59e-25,108;UBERON:0002405,8.08e-20,93;UBERON:0002371,2.46e-19,76;UBERON:0001474,1.97e-18,82;UBERON:0004765,3.09e-14,90;UBERON:0001434,3.77e-11,100;UBERON:0002384,1.16e-10,371 | |||
|phase1_expression=40.6959569566047,37.2534911570311,39.18532433868,33.024188456533,36.2038486486103,33.148863915814,37.9949817252466,31.5859936713415,32.38701789678,43.9863746337701,85.1317424926362,52.4259293112413,38.2462118431258,43.1944571830563,32.1455454456078,40.3395087871065,34.3535880973667,33.5942641578192,37.570825506869,78.920598227221,58.3441976958564,59.2429423593586,45.225285966707,46.9479277999993,43.0611253810174,32.857764471619,38.2588746836747,36.7579348734882,260.407151273974,214.176804138245,144.443443053899,29.4214791833257,28.6145622839338,29.9500748235098,92.8057062952013,62.5544622944655,65.1792975323361,251.513915473472,321.472749294637,219.18097942301,43.8874329510252,50.5274118989608,52.5454157973741,164.009213343349,154.929136912412,183.878718380365,180.132503601906,185.025549609822,275.638670096642,140.393887453209,134.484370927778,166.010525381787,355.77754252019,320.160403057578,398.153870587365,169.229863248802,177.934809837715,195.734154951669,243.030610542497,229.143325332331,379.76625272463,104.233010859002,123.069076752547,120.621604400752,193.859771403894,213.90422970856,301.445968513858,150.497950488789,147.579665912917,187.651161825221,188.279245318978,293.148998246101,311.082526854389,128.865724650284,160.941455073538,121.811673040366,134.682028744648,146.57264741331,163.297196084233,127.970721939821,159.730091790869,141.930047475121,58.0787606722365,72.0902966866013,63.1551570243124,61.8758822721435,64.864149899834,72.9935598742194,74.6980706246894,64.8756553084048,126.934492111407,120.383623821042,131.501990475079,75.3376572900447,202.343591236335,52.1500487854653,178.022341953019,174.889789423378,182.368529612565,63.5308682484577,122.54677225423,97.0568001756203,103.258166056193,70.5228192083149,92.211649039624,79.7522020501036,100.739037320586,52.5174410875268,44.6103562130382,61.0064626079638,53.6119034504546,65.4954973761219,105.580032971387,100.595351361732,122.306562851823,55.1816498937147,114.199707093373,102.057351308341,145.739342603234,76.4556994377832,65.7594288394983,63.6802869780411,101.035904901186,115.187950038977,86.2022013211186,88.5546922644623,79.6494157013415,184.671776793855,165.545481189991,166.258415657453,31.694892620815,30.1815386866636,26.8511379871414,43.0112591337634,37.6003432976917,30.9971550576163,62.0323038699857,40.8773291054214,48.2127567536746,34.1463272092348,43.1268797753249,58.1547095209844,41.8939581536424,36.3368753928741,33.7529289400871,37.0896340447439,45.4716224974519,134.508712108213,137.278778587231,160.098183073042,50.6844138785098,38.7105567797756,40.2682981864809,43.5287115281487,44.0474408020401,54.1982542621933,50.3677869353713,52.7170188705431,61.5475634448009,57.2372247827586,56.3961043952806,28.130067911585,30.5077571935212,58.826092855339,40.507097394088,52.1510413179026,44.0077570347293,40.0896870520627,55.193989487718,62.6515335314965,32.9763139074733,227.980122164389,275.323987545311,28.3461133892647,31.8062049085004,37.9891534993739,95.3346101855175,107.850569401554,37.2401801308275,27.473202406973,32.0246987189115,31.0801111005622,45.7480222037657,31.522297264307,35.634694878734,74.0137821183715,21.31850920576,41.0062505709144,34.6497685281656,46.2082175451004,25.4062756938062,26.7750656907784,32.5364618179944,37.7812670029048,42.8723759635276,37.587301097401,48.7697687149613,38.0160914330257,32.1447008062124,111.039686156439,43.8357066507905,35.8555922722161,41.0388745180042,49.3174125561846,35.118209670467,26.9709260303137,28.9959453689732,32.328172200606,99.7406374430072,36.3047560991565,39.6312655168381,89.7272377292363,51.423212089981,102.025653858069,36.1066701283284,67.172980232024,53.6877898438204,108.294089150725,43.6316519564499,52.2116763524762,103.307791422335,50.0737928191372,44.0857540007268,27.2497802960249,33.5477728326727,33.8429422559025,29.7615842956213,31.144495555549,27.5379644600759,29.4397396243652,32.5493897629561,22.6285962627015,43.8058690523485,38.5944562915731,35.9150795516449,44.57932109107,38.259612528488,44.1284364148618,44.5063581806188,50.8533273054147,44.8896469020843,48.3692365885142,47.2168532031082,48.5392709376592,62.9870903052361,52.7103605016555,42.8130163682296,46.2797853551371,55.1509175184076,63.213745895783,49.434463580514,57.0039785673023,72.6671585218127,114.780405847809,57.435600799634,37.23021483478,38.8516010346534,30.3484733795573,30.3597496683125,34.1651362634974,56.6906451239965,38.4775870553444,28.8662684050547,45.9084403701304,23.2469214586927,40.5669718208617,43.983623694778,41.2851510349078,47.4122638775565,53.2261420498821,37.178767919197,40.4827378690881,41.022200791689,22.4961201568265,36.2841396909537,35.4437743105966,16.0309755638098,21.2162775115192,27.9869355790604,162.578868505661,58.3761117507689,134.763275101502,112.557683618647,123.338857457573,38.2892302581779,42.4007152369688,33.9930596909136,35.9252136647681,48.637404048672,37.2425391726458,57.1652865261156,100.581582657789,54.0590485353267,50.6767555022765,45.1158287994644,71.5312891703765,30.430899092016,47.0710466355221,33.2823798116371,61.9869771971762,51.0656875283802,59.1457237415741,36.4593883828276,65.1145926469732,49.3944202068461,28.9905204021424,30.5637075918589,34.0539305361375,30.1439377059586,33.1182714268112,28.7922214604324,34.0546585795333,35.1579964002489,27.4084121327941,40.0173508670943,35.6072001085753,82.7294049236167,32.7205753068729,33.2871642531621,38.6771680598174,108.162163953754,174.372222778706,155.251853898852,155.166730862216,48.0238839780456,35.1377605415579,74.2357260266588,43.721745252265,47.2074676223341,192.494805154426,170.522031746294,196.847368882117,43.4327880685755,35.0119364741774,34.7219230335662,27.4521537220665,25.336916409197,33.2752095721602,25.8882527133896,25.5804184768561,31.8370505678379,27.9377292489763,51.809596685764,33.1864503375066,38.1419067514884,67.7472004821082,39.1183503144376,142.669938024792,171.4927896508,148.564760462395,113.066584149455,54.923695038464,42.0322507728256,35.9756321337226,94.5325755454465,24.9787484045435,34.3412920005279,44.0068234197365,29.918829332711,22.2627099667486,40.0945203886904,33.0264809082416,38.6818904825041,32.7130290385681,35.2117446733676,66.7144161745755,24.4617893770008,25.6905959131151,38.6924690314725,32.4122279051956,31.0764863453835,50.0831570327227,24.1058005136818,60.3949322266179,67.2240433404999,28.1822849143978,56.8666920354483,50.5178304671252,39.0807808144872,86.367261506562,54.4602339463144,48.6639080639208,44.0935952367916,42.3848764553649,46.3420742274909,80.468374729058,61.1758955398267,25.1321122614061,60.3546948087459,38.0692721757235,74.9108154678941,40.6568423793445,42.5749019590234,68.3375990215445,50.0546389448121,35.3504645657151,52.6855414692065,33.5825985309925,35.6128525364621,27.5673144969061,46.8352267625673,36.3991901724714,35.0281438680175,55.7340543148576,24.1315976427028,22.2940478143523,72.9944715469021,23.7720785010542,18.1289764225941,58.8699088573297,32.0637144273876,35.7318953004263,34.0675859402894,23.488190786027,25.9453906745488,6.29749501664761,34.9828867198087,38.2819103909658,32.4071329670502,49.3882737230874,30.3836681504084,35.320560519779,32.9678428883677,35.2550016863297,32.9444435683266,30.7490370122242,35.9884817200503,25.3616513876813,32.8581595866405,67.2934559943635,38.5067313617429,41.2035572351346,42.3149725364756,25.7357886155757,30.5121914874656,30.876459238583,25.8741200344076,20.6071916069268,45.1444916728016,40.0095798748446,25.9725282512261,37.17881977197,34.3668635089335,44.60093053546,26.3307429915165,34.2404209422,29.7999293819302,42.8548499654258,44.1255156566269,81.9662055333945,54.5898163582173,24.5366387450056,32.1745092257178,41.3785742473026,75.879903426084,28.4133545963012,30.3248656201726,35.9178424364707,21.1345528190403,103.01186467413,91.756464857085,65.5094265250287,67.4195924545543,71.1656732439116,103.107256479642,95.0455329539082,80.1056428057213,47.2162394383431,54.8613517500114,50.9683649240546,56.6699684133442,69.6820298676229,91.7729779194542,77.8000210916653,68.0565656585905,55.1535465981216,95.2531122257473,76.2861559645205,64.864148144209,58.199843153464,47.16064862768,47.6205506471128,86.6773902344209,46.0887775547618,47.6247308970872,95.8154034803234,90.6854110155219,48.2367999964279,49.4324198442239,52.0569322141154,46.1115905148815,41.2041137364959,67.6980694212418,48.141110768725,71.9435450875291,50.7553218316258,28.8196432228658,55.5265999440478,28.0342805241376,51.70973030475,46.3141919294453,85.9480145055684,36.2296910615819,87.2336393961819,49.7073823883149,57.6744607283102,65.7834446685374,36.4216562041139,98.384440187645,61.1691323930784,93.9365312805902,60.211926737172,95.6212181395147,59.4499610376966,27.0604441265772,75.9387567194912,44.5762724942267,43.995223839511,41.4302303675121,55.0811112397962,66.6821940867821,34.8959788594279,26.9955165650987,37.9266216202269,65.1069402713083,73.2040199968158,36.9749783471745,35.5035558650759,43.477374200063,34.9853769016546,39.6454879227684,25.6612059777264,74.3114978314491,34.5439140467397,53.5448187496811,36.6196167161,46.775026950908,31.328047609076,38.6118298990992,36.3854468153427,69.572448395023,60.4829031839845,42.2725027192374,43.5765779293434,28.9917191443564,29.1174956750982,133.342484767942,38.1961964485766,126.862276692435,81.7546385565892,44.8963533289771,50.5283512976475,30.6810098439366,34.5070060399222,42.626683091864,62.8084855317053,131.440550816773,39.4566380667411,82.4325681203696,71.666007217008,38.5171778740922,56.7299300714748,47.2363394447831,35.4397484061503,169.313564476635,74.0147994289552,80.8225889172225,65.5139012572181,40.1288823649394,26.940411258414,54.5539819754841,50.8728009223433,64.0940201970005,95.4894254895525,48.3962864194656,57.5416791865321,62.1124077748037,121.761969725739,62.6276676039373,67.7946950161329,39.7190347050599,39.5555477193104,60.930939184209,38.1376791679922,44.6532447102307,44.4312930137935,58.4034688589691,59.9837933338974,68.3181272826338,39.3848014360002,74.5991314238846,64.3916883529295,67.7452520688976,39.3775406942983,72.3700238870302,49.2638014901561,28.0935945525839,47.4927921970145,43.4945168216887,44.9768180290047,40.5603630472761,61.6879154796729,55.9466906829965,61.8147889591115,50.0524925245051,117.199383539722,43.7926585883975,73.9302586614323,49.495747269527,28.9475958936798,35.8787762851303,60.9949341465204,94.7757934876982,28.2197535693601,57.9109752713131,84.3127481242017,47.7039639976152,74.9228959696046,76.8026603498699,76.3104211958907,91.8877471458322,61.5011321536893,61.3793248835296,25.2183746909316,86.5323125629034,21.6179930125442,61.7428532495505,40.6521220705274,42.0320877743949,41.5205830141779,48.6231758682859,51.5660592280627,37.3757954210372,62.9259736235479,34.7226800684441,39.1987394302116,41.5440338029185,164.230940832595,618.267761691802,48.7818939963938,31.1954259467317,54.2971323291475,97.3032609904215,79.2002523895549,26.8931008999267,60.4532871556253,24.2996410966945,13.2418394073086,40.1744289494505,26.0639808841782,32.8404166656482,35.924609612035,38.313661299996,61.5693905620042,41.2339012720721,47.9310147130132,36.0518494848083,42.4022044519108,31.932890221303,53.4219711040468,36.6125833072465,52.8611266737504,40.0452797128855,131.73720767352,51.7798819183994,33.2431234614007,44.2650055451395,66.3769661175883,69.5791970969498,111.523649690742,82.2262852394456,88.8402172614039,73.771341909706,44.2892551425661,23.0377726791416,30.5065662254908,48.3236992527089,38.4184161112348,63.6732755821532,57.3770763178383,76.9218410245443,35.9943574930867,55.958524372868,47.3872453684646,50.1116195957106,58.5418632258602,63.0406474457089,44.4779312602885,60.7654605602784,52.7065568427483,59.472543656378,46.791629725979,47.1599947446164,43.0219328586216,51.267283155738,37.6158025410329,49.5314752465274,51.2935590267122,80.0649539651216,36.7973207796735,37.7382649135178,28.4450634577054,45.3918203776208,31.2535826714214,37.3189107925419,60.2168685142899,44.7347701638296,46.61618175644,41.7630383890644,61.7048627482855,60.8042202287994,32.9659876975481,38.7261912080807,66.877996061185,33.1306108300562,58.9714376281046,58.2017271082422,36.7263599329881,34.2653261999274,43.8078701066577,36.8923012627864,39.2177837894435,41.2254013207969,48.9428934270091,36.4607532332029,32.2680061647369,25.1116688216188,34.1976038313887,65.3298905781372,54.0590485353267,143.222326996951,110.144952619778,110.079510334183,34.0714242800269,24.3315179666182,47.1226035089738,65.1958910487071,46.8376693357278,43.3981748745256,42.5636965175127,40.503309055405,28.1157810516083,32.9700947817476,38.7519945050065,56.7158507946546,60.3901216726642,49.5811757391743,32.0794481613108,72.2754728345722,77.5837884261354,35.7532747502876,31.8004350653419,84.4609288963423,30.4216884348478,46.905900510861,42.874366829448,47.2084804458977,28.339315265117,58.5856262739745,26.0497782585759,29.9965318503845,50.6922660562717,43.9213756118635,34.2646608621971,62.5200966851533,41.8792517884478,55.9457225491121,86.9908266112047,49.9610545061989,46.2541150460267,63.6531910772079,65.207354678806,22.5909676947942,35.9496445167223,44.000324672879,85.1613971052503,69.0487922633601,41.4005393710759,24.2134210570293,57.4589294273292,49.7814110022169,24.6138664058199,41.1193325142887,67.484720260944,67.1828153453751,29.1298335018277,55.7129909313418,126.442679554278,66.1592508617928,123.620569903755,90.387715195729,69.3708605085791,27.2665935005495,43.5006291051723,50.118853454891,49.8778008530346,44.7150235606118,59.6547505663907,34.0940830117724,129.485739450971,36.5263488203798,57.8685944465905,28.665101273223,73.7637935903093,50.4063421427398,42.1956374086295,70.4126002825447,111.437879697505,54.4978511748787,78.0183440319351,125.809258450165,86.0454717640555,45.9128162834594,48.3160004984424,74.5161208336035,60.4842132956292,143.62555656258,44.9103301319394,46.308148764286,51.5288726480026,46.5726473432269,64.0954548816016,44.9663094030362,35.9542473714842,45.6568333475591,28.0727356154527,97.8837813793932,61.3627668412254,63.8145363520124,29.7938800380113,82.7276382745371,50.6262477188117,34.3138509991213,41.387922079814,51.971444211828,34.644452423939,30.0351954685866,68.914764875884,41.8429170307566,33.1357873641243,48.4017177596246,109.127204339266,67.460280249327,39.8175283090616,88.5766128006386,53.4407502149861,35.0561466358328,58.7173482757812,60.9193228393668,48.1203264689213,54.1212261919681,37.5261593692725,81.9991602798871,39.4314719256756,60.5450073507158,44.5605358987503,30.5322748100891,37.3688256115839,42.6973948408543,36.3080233881455,49.1680025688631,55.3207295199766,42.6202816797038,47.4374650846179,58.4161803740469,29.8500998205161,68.8863752440222,75.0583616291453,63.3251387693549,66.2682214917423,111.486186875361,52.2534479625659,70.9665814801539,55.1779925855939,59.4366721758704,41.0679961302337,76.8486924896444,57.0908754925704,38.5886013593376,91.7414837245683,63.5027707972407,119.704815017903,37.7265848847665,51.6210073287599,107.816953769288,48.0137490412571,72.5674883862209,75.8802201838169,57.7023286145819 | |||
|short_description=p1@NXF1 | |||
}} |
Revision as of 08:13, 11 January 2014
Short description: | p1@NXF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NXF1_5end |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | 0bp_to_ENST00000439713, ENST00000525576, ENST00000526163, ENST00000531131_5end |
EntrezGene: | NXF1 |
HGNC: | 8071 |
UniProt: | Q9UBU9E9PQA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.12e-26 | 98 |
blood island | 2.12e-26 | 98 |
hemolymphoid system | 6.59e-25 | 108 |
immune system | 8.08e-20 | 93 |
bone marrow | 2.46e-19 | 76 |
bone element | 1.97e-18 | 82 |
skeletal element | 3.09e-14 | 90 |
skeletal system | 3.77e-11 | 100 |
connective tissue | 1.16e-10 | 371 |