FFCP PHASE1:Hg19::chr11:65769302..65769311,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17397 | |||
|TSSclassifier=strong | |||
|UniProt=O75531 | |||
|association_with_transcript=-238bp_to_ENST00000312175,NM_001143985,NM_003860,uc001ogo.2,uc001ogp.2_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_9_at_BANF1_5end | |||
|id=chr11:65769302..65769311,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.43e-28!52;CL:0000542!1.45e-27!53;CL:0000051!1.45e-27!53;CL:0000738!4.86e-25!140;CL:0002087!8.52e-23!119;CL:0002031!7.36e-20!124;CL:0000037!5.64e-19!172;CL:0000566!5.64e-19!172;CL:0000624!3.72e-18!6;CL:0000791!6.06e-18!18;CL:0000789!6.06e-18!18;CL:0002420!6.06e-18!18;CL:0002419!6.06e-18!18;CL:0000790!6.06e-18!18;CL:0000988!1.62e-17!182;CL:0002032!7.91e-16!165;CL:0000837!7.91e-16!165;CL:0000623!1.80e-13!3;CL:0000825!1.80e-13!3;CL:0000084!1.92e-12!25;CL:0000827!1.92e-12!25;CL:0000236!8.20e-11!14;CL:0000945!3.52e-10!24;CL:0000826!3.52e-10!24;CL:0000893!6.82e-09!2;CL:0002489!6.82e-09!2;CL:0000809!6.82e-09!2;CL:0000808!6.82e-09!2;CL:0000894!6.82e-09!2;CL:0000806!6.82e-09!2;CL:0000807!6.82e-09!2;CL:0000805!6.82e-09!2;CL:0002425!6.82e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.59e-26;18!CL:0000789;2.59e-26;18!CL:0002419;2.59e-26;18!CL:0000236;1.11e-25;13!CL:0000624;1.09e-20;6!CL:0000084;6.80e-19;25!CL:0000542;2.78e-17;53!CL:0000945;6.18e-14;24!CL:0000625;1.76e-11;11!CL:0002087;6.02e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.03e-30,52;CL:0000542,3.46e-29,53;CL:0000051,3.46e-29,53;CL:0000791,2.83e-26,18;CL:0000789,2.83e-26,18;CL:0002420,2.83e-26,18;CL:0002419,2.83e-26,18;CL:0000790,2.83e-26,18;CL:0000236,5.85e-24,14;CL:0000624,1.02e-20,6;CL:0000084,7.25e-19,25;CL:0000827,7.25e-19,25;CL:0002087,3.45e-15,115;CL:0000738,5.69e-15,136;CL:0000945,5.40e-14,24;CL:0000826,5.40e-14,24;CL:0002031,4.23e-12,120;CL:0000037,7.49e-12,168;CL:0000625,1.96e-11,11;CL:0000988,3.56e-11,177;CL:0002032,1.82e-10,161;CL:0000837,1.82e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.59e-26;18!CL:0000051;2.78e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.42e-09!4;UBERON:0005058!2.42e-09!4;UBERON:0009113!2.42e-09!4;UBERON:0003295!2.42e-09!4;UBERON:0005562!2.42e-09!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.601633342410425,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,1.32208974556972,0,4.55370375287559,9.98303221930596,8.79228424688026,0,1.12101712596307,0,2.55722701147983,2.75107533924415,2.46721798799411,0,0,0.473447805734733,0,0,0.883817722424512,0,0.541607727530031,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.383220493601921,0.68725489096526,0,0,0,0,0,0,0,0,0,2.62088766192152,1.06976078313403,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@BANF1 | |||
}} |
Revision as of 08:46, 11 January 2014
Short description: | p9@BANF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BANF1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -238bp_to_ENST00000312175, NM_001143985, NM_003860, uc001ogo.2, uc001ogp.2_5end |
EntrezGene: | BANF1 |
HGNC: | 17397 |
UniProt: | O75531 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.03e-30 | 52 |
lymphocyte | 3.46e-29 | 53 |
common lymphoid progenitor | 3.46e-29 | 53 |
mature alpha-beta T cell | 2.83e-26 | 18 |
alpha-beta T cell | 2.83e-26 | 18 |
immature T cell | 2.83e-26 | 18 |
mature T cell | 2.83e-26 | 18 |
immature alpha-beta T cell | 2.83e-26 | 18 |
B cell | 5.85e-24 | 14 |
CD4-positive, alpha-beta T cell | 1.02e-20 | 6 |
T cell | 7.25e-19 | 25 |
pro-T cell | 7.25e-19 | 25 |
nongranular leukocyte | 3.45e-15 | 115 |
leukocyte | 5.69e-15 | 136 |
lymphocyte of B lineage | 5.40e-14 | 24 |
pro-B cell | 5.40e-14 | 24 |
hematopoietic lineage restricted progenitor cell | 4.23e-12 | 120 |
hematopoietic stem cell | 7.49e-12 | 168 |
CD8-positive, alpha-beta T cell | 1.96e-11 | 11 |
hematopoietic cell | 3.56e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.82e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-10 | 161 |