FFCP PHASE1:Hg19::chr11:69240417..69240428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000545202,uc001ooz.1_5end | |||
|description=CAGE_peak_2_at_ENST00000545202_5end,CAGE_peak_2_at_uc001ooz.1_5end | |||
|id=chr11:69240417..69240428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.48e-30;1!DOID:3350;1.15e-15;2!DOID:1909;2.37e-15;2!DOID:8692;5.69e-15;31!DOID:1240;1.37e-09;39!DOID:2531;1.31e-08;51!DOID:0060083;1.31e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.48e-30,1;DOID:3350,1.15e-15,2;DOID:1909,2.05e-15,2;DOID:8692,4.03e-15,31;DOID:1240,3.95e-12,39;DOID:2531,2.17e-09,51;DOID:0060083,2.17e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.75e-52!57;UBERON:0005068!6.75e-52!57;UBERON:0006241!6.75e-52!57;UBERON:0007135!6.75e-52!57;UBERON:0002616!5.45e-43!59;UBERON:0002780!6.99e-43!41;UBERON:0001890!6.99e-43!41;UBERON:0006240!6.99e-43!41;UBERON:0003080!9.77e-42!42;UBERON:0001893!1.30e-39!34;UBERON:0000955!9.09e-38!69;UBERON:0006238!9.09e-38!69;UBERON:0002791!6.51e-37!33;UBERON:0001017!1.09e-35!82;UBERON:0002020!1.24e-35!34;UBERON:0003528!1.24e-35!34;UBERON:0003075!3.20e-34!86;UBERON:0007284!3.20e-34!86;UBERON:0001869!6.62e-34!32;UBERON:0005743!1.09e-33!86;UBERON:0002346!2.36e-32!90;UBERON:0000073!8.44e-30!94;UBERON:0001016!8.44e-30!94;UBERON:0003056!5.24e-27!61;UBERON:0002619!4.76e-23!22;UBERON:0007023!7.33e-22!115;UBERON:0001950!1.34e-21!20;UBERON:0000033!4.11e-21!123;UBERON:0000956!4.87e-20!25;UBERON:0000203!4.87e-20!25;UBERON:0000153!8.88e-20!129;UBERON:0007811!8.88e-20!129;UBERON:0002308!7.33e-19!9;UBERON:0000125!7.33e-19!9;UBERON:0002420!1.16e-18!9;UBERON:0007245!1.16e-18!9;UBERON:0010009!1.16e-18!9;UBERON:0010011!1.16e-18!9;UBERON:0000454!1.16e-18!9;UBERON:0009663!4.71e-18!7;UBERON:0004121!7.86e-17!169;UBERON:0002298!2.77e-16!8;UBERON:0000924!2.97e-16!173;UBERON:0006601!2.97e-16!173;UBERON:0001896!8.06e-12!3;UBERON:0005290!8.06e-12!3;UBERON:0010096!8.06e-12!3;UBERON:0003076!3.66e-11!15;UBERON:0003057!3.66e-11!15;UBERON:0001871!5.44e-11!7;UBERON:0000025!7.25e-11!194;UBERON:0000200!1.37e-09!6;UBERON:0001875!1.39e-08!2;UBERON:0006514!1.39e-08!2;UBERON:0000064!1.80e-08!219;UBERON:0000369!3.32e-08!4;UBERON:0002435!3.32e-08!4;UBERON:0000204!3.32e-08!4;UBERON:0010082!3.32e-08!4;UBERON:0004111!5.17e-08!241;UBERON:0004733!1.83e-07!12;UBERON:0002028!1.83e-07!12;UBERON:0007277!1.83e-07!12;UBERON:0000477!2.24e-07!286;UBERON:0000349!4.94e-07!5;UBERON:0001872!6.07e-07!5;UBERON:0004732!7.33e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.16e-29;1!UBERON:0009661;3.16e-29;1!UBERON:0002950;3.16e-29;1!UBERON:0001891;3.16e-29;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.20e-29,1;UBERON:0009661,4.20e-29,1;UBERON:0002950,4.20e-29,1;UBERON:0001891,4.20e-29,1;UBERON:0009616,4.20e-29,1;UBERON:0010286,4.20e-29,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,2.921597462471,0,0,0,0,0,0,0,0,2.40453741329035,0.614481528616916,2.01308497103174,1.33479313369527,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.876214728748802,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26773461696071,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0.573409195690071,0.665574309221114,0.310482014706917,0,0,0,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.443910671357348,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.339848664884159,0.131545547125698,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.594092800654172,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,1.14671666521161,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000545202,p2@uc001ooz.1 | |||
}} |
Revision as of 09:06, 11 January 2014
Short description: | p2@ENST00000545202, p2@uc001ooz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000545202_5end, CAGE_peak_2_at_uc001ooz.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000545202, uc001ooz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.20e-29 | 1 |
midbrain nucleus | 4.20e-29 | 1 |
regional part of midbrain | 4.20e-29 | 1 |
midbrain | 4.20e-29 | 1 |
presumptive midbrain | 4.20e-29 | 1 |
midbrain neural tube | 4.20e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.48e-30 | 1 |
mesenchymal cell neoplasm | 1.15e-15 | 2 |
melanoma | 2.05e-15 | 2 |
myeloid leukemia | 4.03e-15 | 31 |
leukemia | 3.95e-12 | 39 |
hematologic cancer | 2.17e-09 | 51 |
immune system cancer | 2.17e-09 | 51 |