FFCP PHASE1:Hg19::chr11:111224819..111224845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-141bp_to_CU689419_5end | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_2_at_CU689419_5end | |||
|id=chr11:111224819..111224845,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.54e-69!24;CL:0000826!1.54e-69!24;CL:0000236!3.79e-40!14;CL:0000542!2.66e-35!53;CL:0000051!2.66e-35!53;CL:0000838!3.20e-33!52;CL:0002087!1.34e-13!119;CL:0000738!2.29e-11!140;CL:0000817!4.28e-10!3;CL:0002031!1.11e-09!124;CL:0000037!6.76e-08!172;CL:0000566!6.76e-08!172;CL:0000785!2.09e-07!2;CL:0000955!2.09e-07!2;CL:0000818!2.09e-07!2;CL:0000954!2.09e-07!2;CL:0000816!2.09e-07!2;CL:0000988!4.42e-07!182;CL:0002032!4.44e-07!165;CL:0000837!4.44e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.93e-147;24!CL:0000236;8.02e-78;13!CL:0000542;5.96e-42;53!CL:0002087;4.44e-10;104!CL:0000785;4.28e-08;1!CL:0000819;4.28e-08;1!CL:0000946;1.39e-07;1!CL:0000786;1.39e-07;1!CL:0000817;2.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.92e-147,24;CL:0000826,6.92e-147,24;CL:0000236,7.28e-84,14;CL:0000542,9.90e-70,53;CL:0000051,9.90e-70,53;CL:0000838,2.30e-65,52;CL:0002087,2.88e-29,115;CL:0002031,2.00e-25,120;CL:0000738,4.90e-24,136;CL:0000817,1.21e-19,3;CL:0002032,1.43e-19,161;CL:0000837,1.43e-19,161;CL:0000037,1.47e-18,168;CL:0000988,2.27e-17,177;CL:0000785,5.88e-14,2;CL:0000955,5.88e-14,2;CL:0000818,5.88e-14,2;CL:0000954,5.88e-14,2;CL:0000816,5.88e-14,2;CL:0000819,4.28e-08,1;CL:0000946,1.48e-07,1;CL:0000786,1.48e-07,1;CL:0000980,1.48e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.96e-42;53!CL:0000954;5.51e-14;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.17e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.30e-23;10!DOID:0060073;4.28e-08;1!DOID:8675;4.28e-08;1!DOID:2355;5.40e-08;1!DOID:630;6.37e-08;1!DOID:0050177;6.37e-08;1!DOID:4960;6.37e-08;1!DOID:0070004;6.37e-08;1!DOID:0050427;6.37e-08;1!DOID:12603;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.35e-23,10;DOID:2531,7.38e-09,51;DOID:0060083,7.38e-09,51;DOID:0060073,4.28e-08,1;DOID:8675,4.28e-08,1;DOID:2355,5.58e-08,1;DOID:4960,5.96e-08,1;DOID:0070004,5.96e-08,1;DOID:630,6.37e-08,1;DOID:0050177,6.37e-08,1;DOID:0050427,6.37e-08,1;DOID:12603,1.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.33e-10!7;UBERON:0002106!8.23e-10!3;UBERON:0004854!8.23e-10!3;UBERON:0009034!8.23e-10!3;UBERON:0002095!8.23e-10!3;UBERON:0004782!8.23e-10!3;UBERON:0003281!8.23e-10!3;UBERON:0009664!8.23e-10!3;UBERON:0002296!8.23e-10!3;UBERON:0005602!8.23e-10!3;UBERON:0001179!8.23e-10!3;UBERON:0006293!8.23e-10!3;UBERON:0007023!2.28e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.14e-09;3!UBERON:0002372;2.04e-07;1!UBERON:0001961;2.04e-07;1!UBERON:0001744;2.04e-07;1!UBERON:0001042;2.04e-07;1!UBERON:0001735;2.04e-07;1!UBERON:0000029;2.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.14e-09,3;UBERON:0004854,2.14e-09,3;UBERON:0009034,2.14e-09,3;UBERON:0002095,2.14e-09,3;UBERON:0004782,2.14e-09,3;UBERON:0003281,2.14e-09,3;UBERON:0009664,2.14e-09,3;UBERON:0002296,2.14e-09,3;UBERON:0005602,2.14e-09,3;UBERON:0001179,2.14e-09,3;UBERON:0006293,2.14e-09,3;UBERON:0002372,2.31e-07,1;UBERON:0001961,2.31e-07,1;UBERON:0001744,2.31e-07,1;UBERON:0001735,2.31e-07,1;UBERON:0000029,2.80e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,4.26923065139718,5.35233312933019,0,0,0,0,0,0,7.66925285744986,5.68676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.27683166757279,3.55803701545422,3.41384178053206,3.2031678962881,4.59801951963587,3.96626923670917,4.77026877267682,2.84606484554724,2.34894875748376,1.91136614062614,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0,1.29694662238543,0,0.79312517629427,0,0,0,3.53026032738866,2.59684583357601,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,4.80030741298171,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,11.494651720587,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.13480708770837,0,7.45125322178903,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.48849806543585,8.89252343540749,9.13444487856719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,6.71638420677181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3417856391176,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,2.72553362141575,0.644578879735772,6.09641051142066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,2.28996980249598,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,6.41136984606466 | |||
|short_description=p2@CU689419 | |||
}} |
Revision as of 10:15, 11 January 2014
Short description: | p2@CU689419 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU689419_5end |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | -141bp_to_CU689419_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.92e-147 | 24 |
pro-B cell | 6.92e-147 | 24 |
B cell | 7.28e-84 | 14 |
lymphocyte | 9.90e-70 | 53 |
common lymphoid progenitor | 9.90e-70 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-65 | 52 |
nongranular leukocyte | 2.88e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-25 | 120 |
leukocyte | 4.90e-24 | 136 |
precursor B cell | 1.21e-19 | 3 |
hematopoietic oligopotent progenitor cell | 1.43e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-19 | 161 |
hematopoietic stem cell | 1.47e-18 | 168 |
hematopoietic cell | 2.27e-17 | 177 |
mature B cell | 5.88e-14 | 2 |
pre-B-II cell | 5.88e-14 | 2 |
transitional stage B cell | 5.88e-14 | 2 |
small pre-B-II cell | 5.88e-14 | 2 |
immature B cell | 5.88e-14 | 2 |
B-1 B cell | 4.28e-08 | 1 |
antibody secreting cell | 1.48e-07 | 1 |
plasma cell | 1.48e-07 | 1 |
plasmablast | 1.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.14e-09 | 3 |
gastrointestinal system mesentery | 2.14e-09 | 3 |
stomach region | 2.14e-09 | 3 |
mesentery | 2.14e-09 | 3 |
gastrointestinal system serosa | 2.14e-09 | 3 |
mesentery of stomach | 2.14e-09 | 3 |
gut mesentery | 2.14e-09 | 3 |
dorsal mesentery | 2.14e-09 | 3 |
dorsal mesogastrium | 2.14e-09 | 3 |
peritoneal cavity | 2.14e-09 | 3 |
spleen primordium | 2.14e-09 | 3 |
tonsil | 2.31e-07 | 1 |
mucosa-associated lymphoid tissue | 2.31e-07 | 1 |
lymphoid tissue | 2.31e-07 | 1 |
tonsillar ring | 2.31e-07 | 1 |
lymph node | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.35e-23 | 10 |
hematologic cancer | 7.38e-09 | 51 |
immune system cancer | 7.38e-09 | 51 |
lymphatic system cancer | 4.28e-08 | 1 |
lymphosarcoma | 4.28e-08 | 1 |
anemia | 5.58e-08 | 1 |
bone marrow cancer | 5.96e-08 | 1 |
myeloma | 5.96e-08 | 1 |
genetic disease | 6.37e-08 | 1 |
monogenic disease | 6.37e-08 | 1 |
xeroderma pigmentosum | 6.37e-08 | 1 |
acute leukemia | 1.30e-07 | 1 |