FFCP PHASE1:Hg19::chr11:121323670..121323687,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000501964,uc001pxw.1_5end | |||
|coexpression_cluster_id=C1134 | |||
|description=CAGE_peak_1_at_ENST00000501964_5end,CAGE_peak_1_at_uc001pxw.1_5end | |||
|id=chr11:121323670..121323687,- | |||
|ontology_enrichment_celltype=CL:0000838!3.69e-39!52;CL:0000542!3.80e-38!53;CL:0000051!3.80e-38!53;CL:0000738!1.14e-34!140;CL:0002087!7.99e-32!119;CL:0002031!6.21e-26!124;CL:0000037!4.65e-25!172;CL:0000566!4.65e-25!172;CL:0002032!1.03e-22!165;CL:0000837!1.03e-22!165;CL:0000988!1.68e-22!182;CL:0000945!6.10e-22!24;CL:0000826!6.10e-22!24;CL:0000791!2.67e-17!18;CL:0000789!2.67e-17!18;CL:0002420!2.67e-17!18;CL:0002419!2.67e-17!18;CL:0000790!2.67e-17!18;CL:0000084!2.03e-14!25;CL:0000827!2.03e-14!25;CL:0000236!6.31e-12!14;CL:0000625!7.90e-11!11;CL:0000094!7.51e-10!8;CL:0000624!1.28e-09!6;CL:0000081!9.80e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.09e-20;53!CL:0000791;4.85e-17;18!CL:0000789;4.85e-17;18!CL:0002419;4.85e-17;18!CL:0000775;5.53e-17;3!CL:0000623;9.41e-17;3!CL:0000094;1.08e-16;8!CL:0000945;2.38e-16;24!CL:0000084;4.81e-15;25!CL:0000081;4.51e-12;11!CL:0000625;2.25e-11;11!CL:0000624;2.07e-08;6!CL:0000226;7.50e-08;3!CL:0000898;7.50e-08;3!CL:0000842;7.50e-08;3!CL:0002087;1.43e-07;104!CL:0000738;3.14e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.18e-39,52;CL:0000542,8.13e-39,53;CL:0000051,8.13e-39,53;CL:0000738,2.31e-30,136;CL:0000037,2.16e-23,168;CL:0002087,1.52e-22,115;CL:0000988,6.99e-22,177;CL:0002032,1.90e-19,161;CL:0000837,1.90e-19,161;CL:0002031,1.08e-17,120;CL:0000775,5.55e-17,3;CL:0000791,5.74e-17,18;CL:0000789,5.74e-17,18;CL:0002420,5.74e-17,18;CL:0002419,5.74e-17,18;CL:0000790,5.74e-17,18;CL:0000623,7.64e-17,3;CL:0000825,7.64e-17,3;CL:0000094,7.82e-17,8;CL:0000945,1.39e-16,24;CL:0000826,1.39e-16,24;CL:0000084,6.22e-15,25;CL:0000827,6.22e-15,25;CL:0000081,3.59e-12,11;CL:0000625,2.39e-11,11;CL:0000624,2.35e-08,6;CL:0000898,8.48e-08,3;CL:0000134,9.82e-08,354;CL:0000226,1.15e-07,3;CL:0000842,1.15e-07,3;CL:0002320,1.85e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.09e-20;53!CL:0000790;4.85e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;7.34e-07;1!DOID:0050177;7.34e-07;1!DOID:0050427;7.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.59e-07,1;DOID:0050177,6.59e-07,1;DOID:0050427,6.59e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.73e-09!22;UBERON:0007023!3.76e-09!115;UBERON:0001869!5.00e-09!32;UBERON:0001950!5.36e-09!20;UBERON:0002780!8.16e-09!41;UBERON:0001890!8.16e-09!41;UBERON:0006240!8.16e-09!41;UBERON:0001049!1.47e-08!57;UBERON:0005068!1.47e-08!57;UBERON:0006241!1.47e-08!57;UBERON:0007135!1.47e-08!57;UBERON:0003080!1.75e-08!42;UBERON:0001893!3.02e-08!34;UBERON:0002020!3.06e-08!34;UBERON:0003528!3.06e-08!34;UBERON:0002616!4.68e-08!59;UBERON:0001017!5.22e-08!82;UBERON:0005743!7.11e-08!86;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0002791!1.22e-07!33;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.37e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,3.20192298854788,2.44003422072406,1.96682138424452,0.767658796194425,0.309632246632152,0,0,0,0.387336002901508,0.568676929949686,0,1.10799081706375,2.4065333696417,0.868043482863407,0,0.32389366601898,0,0.290796477559129,0.755751887377619,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.750884464207532,0.32145117339416,0,0,0.365328307529268,0,0.546138611262131,1.77901850772711,0.853460445133014,0.800791974072025,0,0.661044872784862,1.90810750907073,3.41527781465669,3.52342313622563,0.764546456250458,0,1.12101712596307,0,0.786839080455332,2.35806457649499,0.411202997999018,0.668745981562712,2.28145586643513,1.89379122293893,0,0.668462741311041,0.883817722424512,1.10766947291811,2.43723477388514,0.640456598628376,0.520237390239513,0.493313713811028,0.276350017785848,0.289803085735052,0.741432815810302,0,1.04535523804977,0.226618685395132,1.14966148080576,0.68725489096526,0.759059076058509,0.95569624297229,1.30216690771284,0,1.6563263098555,1.53583933385302,0,0.947109008176067,0.821127996921047,0.604820229674197,2.40696176205157,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,4.52817907204986,3.08023287071396,0.254094624222463,0,1.54657762555539,0.167516265334349,0,8.23907726341901,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.15714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,1.19115887728894,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.20453736500431,1.72318727645497,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0.61214552326098,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0.730755590285376,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0.691403925334676,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.248298857183432,0,0,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.402547587182052,3.52625341533556 | |||
|short_description=p1@ENST00000501964,p1@uc001pxw.1 | |||
}} |
Revision as of 10:51, 11 January 2014
Short description: | p1@ENST00000501964, p1@uc001pxw.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000501964_5end, CAGE_peak_1_at_uc001pxw.1_5end |
Coexpression cluster: | C1134_Eosinophils_Neutrophils_CD19_CD8_Natural_CD4_Basophils |
Association with transcript: | 34bp_to_ENST00000501964, uc001pxw.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.18e-39 | 52 |
lymphocyte | 8.13e-39 | 53 |
common lymphoid progenitor | 8.13e-39 | 53 |
leukocyte | 2.31e-30 | 136 |
hematopoietic stem cell | 2.16e-23 | 168 |
nongranular leukocyte | 1.52e-22 | 115 |
hematopoietic cell | 6.99e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.90e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 1.08e-17 | 120 |
neutrophil | 5.55e-17 | 3 |
mature alpha-beta T cell | 5.74e-17 | 18 |
alpha-beta T cell | 5.74e-17 | 18 |
immature T cell | 5.74e-17 | 18 |
mature T cell | 5.74e-17 | 18 |
immature alpha-beta T cell | 5.74e-17 | 18 |
natural killer cell | 7.64e-17 | 3 |
pro-NK cell | 7.64e-17 | 3 |
granulocyte | 7.82e-17 | 8 |
lymphocyte of B lineage | 1.39e-16 | 24 |
pro-B cell | 1.39e-16 | 24 |
T cell | 6.22e-15 | 25 |
pro-T cell | 6.22e-15 | 25 |
blood cell | 3.59e-12 | 11 |
CD8-positive, alpha-beta T cell | 2.39e-11 | 11 |
CD4-positive, alpha-beta T cell | 2.35e-08 | 6 |
naive T cell | 8.48e-08 | 3 |
mesenchymal cell | 9.82e-08 | 354 |
single nucleate cell | 1.15e-07 | 3 |
mononuclear cell | 1.15e-07 | 3 |
connective tissue cell | 1.85e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.37e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.59e-07 | 1 |
monogenic disease | 6.59e-07 | 1 |
xeroderma pigmentosum | 6.59e-07 | 1 |