FFCP PHASE1:Hg19::chr12:31910006..31910040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr12:31910006..31910040,- | |||
|id=chr12:31910006..31910040,- | |||
|ontology_enrichment_celltype=CL:0000860!1.04e-27!45;CL:0002057!1.48e-27!42;CL:0002009!2.09e-19!65;CL:0002194!5.93e-18!63;CL:0000576!5.93e-18!63;CL:0000040!5.93e-18!63;CL:0000559!5.93e-18!63;CL:0000557!1.15e-16!71;CL:0000766!4.67e-16!76;CL:0000066!2.77e-15!254;CL:0000839!6.18e-15!70;CL:0002076!1.48e-11!43;CL:0000223!2.49e-10!59;CL:0000063!1.45e-09!578;CL:0000763!9.79e-09!112;CL:0000049!9.79e-09!112;CL:0002031!5.74e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-40;33!CL:0002057;2.47e-40;33!CL:0000473;1.70e-26;39!CL:0000234;1.70e-26;39!CL:0000576;7.07e-19;48!CL:0000766;3.52e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-36,42;CL:0002057,2.69e-36,42;CL:0000473,5.66e-31,48;CL:0000234,5.66e-31,48;CL:0002194,1.55e-23,59;CL:0000576,1.55e-23,59;CL:0000040,1.55e-23,59;CL:0000559,1.55e-23,59;CL:0002009,1.40e-22,61;CL:0000766,4.42e-22,72;CL:0000839,1.94e-20,66;CL:0000557,4.76e-20,67;CL:0000763,1.18e-12,108;CL:0000049,1.18e-12,108;CL:0002087,2.51e-10,115;CL:0000738,1.06e-09,136;CL:0002031,1.16e-09,120;CL:0002032,2.83e-07,161;CL:0000837,2.83e-07,161;CL:0000037,9.86e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;7.50e-26;42 | |||
|ontology_enrichment_disease=DOID:305!1.15e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.29e-14!80;UBERON:0001474!1.72e-12!86;UBERON:0002405!1.57e-10!115;UBERON:0002193!6.36e-10!112;UBERON:0002390!6.74e-10!102;UBERON:0003061!6.74e-10!102;UBERON:0004765!1.88e-09!101;UBERON:0001434!1.88e-09!101;UBERON:0000062!1.68e-08!511;UBERON:0004119!7.80e-08!169;UBERON:0000925!7.80e-08!169;UBERON:0006595!7.80e-08!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-18,76;UBERON:0002405,5.77e-17,93;UBERON:0001474,8.04e-17,82;UBERON:0004765,8.43e-15,90;UBERON:0002193,1.01e-13,108;UBERON:0002390,4.09e-13,98;UBERON:0003061,4.09e-13,98;UBERON:0001434,9.79e-13,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0,1.96682138424452,2.30297638858328,0.928896739896456,0.919421224478927,0,1.47901604066715,0,0,0,0,1.20326668482085,0.868043482863407,0,0,0,1.30858414901608,0.755751887377619,0.242584061187816,4.88100977501938,3.28934310417461,7.12324653058738,1.43846196161075,1.7931249457037,2.83778675866302,14.8240642716746,12.2642089880927,6.77132432971709,3.01187743268168,1.09162460023138,1.79778787556068,3.97909060082173,3.53021929783703,5.75403413219137,0.329851300186716,0,0.426224750532694,0.290209238628584,2.26954089876456,1.24564449799115,3.01498398308092,2.60741459210101,5.86409880703815,0.605399502633369,1.47311054395026,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,1.03366703667732,1.77883131343355,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,1.19705285616665,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,2.17781969722645,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0.921482106297696,0,0,1.33570446027487,0,0,0,0,0,0.306806047506464,0.123084805461069,0,1.07842021376792,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0.265372693510018,3.05515072466813,0,0,0,0,0,0,0,5.6742739490306,0,0,1.20990716048664,0,0,1.80388103297391,0.518440956986236,0.664653872707185,0,0.313932918407225,0,0,1.10939738410511,0.694238953340524,0.293977192243133,0.261177619741208,0,0,0.0967563312890851,0.146178634172371,0,0.290967049465258,0,0,0,0.993573058514948,0,0,0.721429382263803,0.426905989478705,0,1.87317542300338,0,0,14.9816989907676,2.98206085357038,0,0.135904206073614,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,1.16160370171347,0,1.34340638123612,0,0,0,0,0,0,2.39460383124975,0.082092520749339,0,0,0,0,0,0,0.684347351537318,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,4.23763626896067,0,0,0,0,0,0,0,0,0,0.771656153083659,1.8583668471838,0,1.0362910251936,0.911579868532147,0,0,0,0,0,0.491545817507439,1.69049698686902,0,0,1.03328987796489,0,0.184105950251841,2.51783113895,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.366857197043358,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,1.20041606606193,0,0,0,0.111231401892069,0,0,2.5224494698241,0,0,0,0,0,0,0,0,0.62164849248911,0,0.691259661814092,0,0.236664001461131,0.596493833314104,0,0.9164274741762,3.1020638566432,3.82215575590973,0,3.14080747568778,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.926089897295336,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0.357107877211315,23.6439564049513,136.00911653814,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47031839255752,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.932388670104793,0,0,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr12:31910006..31910040,- | |||
}} |
Revision as of 12:54, 11 January 2014
Short description: | p@chr12:31910006..31910040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31910006..31910040, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.69e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-36 | 42 |
defensive cell | 5.66e-31 | 48 |
phagocyte | 5.66e-31 | 48 |
monopoietic cell | 1.55e-23 | 59 |
monocyte | 1.55e-23 | 59 |
monoblast | 1.55e-23 | 59 |
promonocyte | 1.55e-23 | 59 |
macrophage dendritic cell progenitor | 1.40e-22 | 61 |
myeloid leukocyte | 4.42e-22 | 72 |
myeloid lineage restricted progenitor cell | 1.94e-20 | 66 |
granulocyte monocyte progenitor cell | 4.76e-20 | 67 |
myeloid cell | 1.18e-12 | 108 |
common myeloid progenitor | 1.18e-12 | 108 |
nongranular leukocyte | 2.51e-10 | 115 |
leukocyte | 1.06e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.16e-09 | 120 |
hematopoietic oligopotent progenitor cell | 2.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-07 | 161 |
hematopoietic stem cell | 9.86e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-18 | 76 |
immune system | 5.77e-17 | 93 |
bone element | 8.04e-17 | 82 |
skeletal element | 8.43e-15 | 90 |
hemolymphoid system | 1.01e-13 | 108 |
hematopoietic system | 4.09e-13 | 98 |
blood island | 4.09e-13 | 98 |
skeletal system | 9.79e-13 | 100 |