FFCP PHASE1:Hg19::chr12:46662772..46662835,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2H9 | |||
|association_with_transcript=0bp_to_ENST00000398637,ENST00000439706,ENST00000549049,ENST00000549633_5end | |||
|coexpression_cluster_id=C3281 | |||
|description=CAGE_peak_1_at_SLC38A1_5end | |||
|id=chr12:46662772..46662835,- | |||
|ontology_enrichment_celltype=CL:0000542!9.59e-21!53;CL:0000051!9.59e-21!53;CL:0000838!2.02e-20!52;CL:0000791!3.79e-12!18;CL:0000789!3.79e-12!18;CL:0002420!3.79e-12!18;CL:0002419!3.79e-12!18;CL:0000790!3.79e-12!18;CL:0000945!3.89e-10!24;CL:0000826!3.89e-10!24;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000236!1.49e-08!14;CL:0000625!3.87e-08!11;CL:0002076!7.71e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.74e-12;18!CL:0000789;3.74e-12;18!CL:0002419;3.74e-12;18!CL:0000542;4.60e-12;53!CL:0000945;3.66e-10;24!CL:0000084;9.72e-10;25!CL:0000236;2.91e-08;13!CL:0000625;3.93e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.81e-21,53;CL:0000051,8.81e-21,53;CL:0000838,1.86e-20,52;CL:0000791,3.77e-12,18;CL:0000789,3.77e-12,18;CL:0002420,3.77e-12,18;CL:0002419,3.77e-12,18;CL:0000790,3.77e-12,18;CL:0000945,3.87e-10,24;CL:0000826,3.87e-10,24;CL:0000084,1.02e-09,25;CL:0000827,1.02e-09,25;CL:0000236,1.48e-08,14;CL:0000625,3.86e-08,11;CL:0002076,2.06e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;3.74e-12;18!CL:0000051;4.60e-12;53 | |||
|ontology_enrichment_disease=DOID:305!6.32e-16!106;DOID:0050687!2.09e-13!143;DOID:162!3.49e-09!235;DOID:14566!2.60e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.70e-16,106;DOID:0050687,1.85e-13,143;DOID:162,3.06e-09,235;DOID:14566,2.30e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@SLC38A1 | |||
}} |
Revision as of 13:07, 11 January 2014
Short description: | p1@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC38A1_5end |
Coexpression cluster: | C3281_bronchogenic_CD4_CD8_acute_Dendritic_somatostatinoma_small |
Association with transcript: | 0bp_to_ENST00000398637, ENST00000439706, ENST00000549049, ENST00000549633_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | Q9H2H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.81e-21 | 53 |
common lymphoid progenitor | 8.81e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.86e-20 | 52 |
mature alpha-beta T cell | 3.77e-12 | 18 |
alpha-beta T cell | 3.77e-12 | 18 |
immature T cell | 3.77e-12 | 18 |
mature T cell | 3.77e-12 | 18 |
immature alpha-beta T cell | 3.77e-12 | 18 |
lymphocyte of B lineage | 3.87e-10 | 24 |
pro-B cell | 3.87e-10 | 24 |
T cell | 1.02e-09 | 25 |
pro-T cell | 1.02e-09 | 25 |
B cell | 1.48e-08 | 14 |
CD8-positive, alpha-beta T cell | 3.86e-08 | 11 |
endo-epithelial cell | 2.06e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.70e-16 | 106 |
cell type cancer | 1.85e-13 | 143 |
cancer | 3.06e-09 | 235 |
disease of cellular proliferation | 2.30e-08 | 239 |