FFCP PHASE1:Hg19::chr12:52525577..52525579,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:52525577..52525579,- | |||
|id=chr12:52525577..52525579,- | |||
|ontology_enrichment_celltype=CL:0000066!4.06e-14!254;CL:0000076!4.08e-12!62;CL:0002251!3.06e-10!21;CL:0002076!3.44e-09!43;CL:0000223!4.76e-09!59;CL:0002178!3.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.72e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.55e-11,19;CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29!UBERON:0001041;1.17e-07;30 | |||
|ontology_enrichment_disease=DOID:1749!2.03e-47!14;DOID:305!4.07e-41!106;DOID:0050687!9.43e-31!143;DOID:162!1.02e-19!235;DOID:14566!3.78e-19!239;DOID:299!8.61e-11!25;DOID:3493!1.56e-10!2;DOID:4074!4.02e-10!2;DOID:4905!4.02e-10!2;DOID:3498!4.02e-10!2;DOID:170!2.25e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-32;14!DOID:4556;8.69e-18;3!DOID:1324;2.94e-14;15!DOID:0050615;1.95e-13;16!DOID:3908;3.10e-11;5!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-32,14;DOID:4556,8.00e-18,3;DOID:1324,2.58e-14,15;DOID:0050615,1.72e-13,16;DOID:3908,2.94e-11,5;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0003343!7.29e-20!4;UBERON:0004785!7.29e-20!4;UBERON:0003729!6.41e-16!5;UBERON:0000344!9.09e-10!12;UBERON:0002075!8.07e-09!18;UBERON:0002114!8.28e-09!12;UBERON:0000974!5.42e-08!10;UBERON:0001264!9.67e-08!10;UBERON:0003922!9.67e-08!10;UBERON:0003923!9.67e-08!10;UBERON:0003924!9.67e-08!10;UBERON:0003921!9.67e-08!10;UBERON:0002108!1.35e-07!14;UBERON:0001007!1.40e-07!155;UBERON:0001555!1.40e-07!155;UBERON:0007026!1.40e-07!155;UBERON:0004119!1.90e-07!169;UBERON:0000925!1.90e-07!169;UBERON:0006595!1.90e-07!169;UBERON:0001045!4.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.72e-11;19!UBERON:0000115;1.72e-11;19!UBERON:0002048;4.53e-10;22!UBERON:0004807;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.55e-11,19;UBERON:0000115,1.55e-11,19;UBERON:0002048,4.14e-10,22;UBERON:0000117,4.14e-10,22;UBERON:0000171,4.14e-10,22;UBERON:0000170,4.14e-10,22;UBERON:0005597,4.14e-10,22;UBERON:0000118,4.14e-10,22;UBERON:0004807,3.65e-08,28;UBERON:0005178,6.75e-07,34;UBERON:0002224,6.75e-07,34;UBERON:0005181,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0,0,0.0979923974143777,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0.14405479798815,0.124252535565433,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.589848616738702,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.827356886187777,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.196300467230486,0.609589624911347,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42843150884526,0.352894871715692,1.84555143385087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:52525577..52525579,- | |||
}} |
Revision as of 13:32, 11 January 2014
Short description: | p@chr12:52525577..52525579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52525577..52525579, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.55e-11 | 19 |
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.55e-11 | 19 |
lung epithelium | 1.55e-11 | 19 |
lung | 4.14e-10 | 22 |
respiratory tube | 4.14e-10 | 22 |
respiration organ | 4.14e-10 | 22 |
pair of lungs | 4.14e-10 | 22 |
lung primordium | 4.14e-10 | 22 |
lung bud | 4.14e-10 | 22 |
respiratory system epithelium | 3.65e-08 | 28 |
thoracic cavity element | 6.75e-07 | 34 |
thoracic cavity | 6.75e-07 | 34 |
thoracic segment organ | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.46e-32 | 14 |
lung large cell carcinoma | 8.00e-18 | 3 |
lung cancer | 2.58e-14 | 15 |
respiratory system cancer | 1.72e-13 | 16 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
lung carcinoma | 7.91e-07 | 9 |