FFCP PHASE1:Hg19::chr12:52638257..52638271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=95bp_to_ENST00000552322_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_25_at_KRT7_5end | |||
|id=chr12:52638257..52638271,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.76e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002379;3.98e-14;1!CL:0000222;4.83e-14;1!CL:0002174;1.10e-13;1!CL:0000501;1.10e-13;1!CL:0002589;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,3.98e-14,1;CL:0002174,1.10e-13,1;CL:0000501,1.10e-13,1;CL:0002589,2.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.51e-07!235;DOID:14566!6.24e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.98e-14;1!DOID:3565;3.98e-14;1!DOID:0060060;1.10e-13;1!DOID:0060061;1.10e-13;1!DOID:8691;1.10e-13;1!DOID:4231;1.75e-07;2!DOID:1907;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.98e-14,1;DOID:3565,3.98e-14,1;DOID:0060060,5.85e-14,1;DOID:0060061,5.85e-14,1;DOID:8691,5.85e-14,1;DOID:4231,2.12e-07,2;DOID:1907,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!6.30e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.07e-12;10!UBERON:0000178;2.96e-08;15!UBERON:0000179;2.96e-08;15!UBERON:0000463;2.96e-08;15!UBERON:0006562;1.75e-07;2!UBERON:0001529;1.75e-07;2!UBERON:0007204;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.15e-12,10;UBERON:0000358,4.15e-12,10;UBERON:0000307,4.15e-12,10;UBERON:0000091,4.15e-12,10;UBERON:0000087,4.15e-12,10;UBERON:0007010,4.15e-12,10;UBERON:0007806,4.15e-12,10;UBERON:0008780,4.15e-12,10;UBERON:0005728,4.15e-12,10;UBERON:0000178,3.00e-08,15;UBERON:0000179,3.00e-08,15;UBERON:0000463,3.00e-08,15;UBERON:0001529,2.40e-07,2;UBERON:0007204,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,1.02738161275192,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.788512075169673,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,1.00187420719394,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,1.33570446027487,0,0.422250816255987,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,3.26173241548684,5.93106906943214,5.95205112181096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.391969589657511,0,0,0,0.0967563312890851,0,0,0,0,0,0.822251547880505,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0.543616824294456,0.313808538937,0.305994652908965,0,0,0,0,1.28929632425987,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,4.47005057426526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,3.78554694685953,0.192619830407303,0.214441591374926,0.260994291965212,0,0.694567422971502,0,0.537266523244462,0,0,0,0,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0,0,1.9998739585493,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,1.42843150884526,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p25@KRT7 | |||
}} |
Revision as of 13:33, 11 January 2014
Short description: | p25@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_KRT7_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 95bp_to_ENST00000552322_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 3.98e-14 | 1 |
follicular cell of ovary | 1.10e-13 | 1 |
granulosa cell | 1.10e-13 | 1 |
smooth muscle cell of the brachiocephalic vasculature | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.15e-12 | 10 |
blastocyst | 4.15e-12 | 10 |
blastula | 4.15e-12 | 10 |
bilaminar disc | 4.15e-12 | 10 |
inner cell mass | 4.15e-12 | 10 |
cleaving embryo | 4.15e-12 | 10 |
connecting stalk | 4.15e-12 | 10 |
inner cell mass derived epiblast | 4.15e-12 | 10 |
extraembryonic mesoderm | 4.15e-12 | 10 |
blood | 3.00e-08 | 15 |
haemolymphatic fluid | 3.00e-08 | 15 |
organism substance | 3.00e-08 | 15 |
brachiocephalic artery | 2.40e-07 | 2 |
brachiocephalic vasculature | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.98e-14 | 1 |
meningioma | 3.98e-14 | 1 |
non-Hodgkin lymphoma | 5.85e-14 | 1 |
cutaneous T cell lymphoma | 5.85e-14 | 1 |
mycosis fungoides | 5.85e-14 | 1 |
histiocytoma | 2.12e-07 | 2 |
malignant fibroxanthoma | 2.12e-07 | 2 |