FFCP PHASE1:Hg19::chr12:54380404..54380433,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=190bp_to_ENST00000513413_5end | |||
|description=CAGE_peak_3_at_HOXC10_5end | |||
|id=chr12:54380404..54380433,+ | |||
|ontology_enrichment_celltype=CL:0000153!6.80e-09!9;CL:0000447!6.80e-09!9;CL:0000055!4.76e-08!180;CL:0002570!1.85e-07!8;CL:0000499!2.30e-07!27;CL:0000667!5.87e-07!6;CL:0000058!5.87e-07!6;CL:0000138!5.87e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;6.35e-11;9!CL:0000447;6.35e-11;9!CL:0002570;5.16e-09;8!CL:0000138;2.14e-08;6!CL:0000680;4.81e-07;7!CL:0000499;6.22e-07;28!CL:1000507;9.13e-07;10!CL:1000494;9.13e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.02e-11,9;CL:0000447,8.02e-11,9;CL:0002570,5.15e-09,8;CL:0000058,2.21e-08,6;CL:0000138,2.21e-08,6;CL:0000499,6.67e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.15e-12!143;DOID:14566!1.83e-08!239;DOID:162!1.96e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.23e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.82e-10!9;UBERON:0001013!1.99e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.32e-12;9!UBERON:0001557;6.32e-12;9!UBERON:0004765;1.46e-10;26!UBERON:0001013;2.95e-09;14!UBERON:0004905;1.17e-08;8!UBERON:0000982;1.17e-08;8!UBERON:0004770;1.17e-08;8!UBERON:0001474;1.44e-08;18!UBERON:0001434;2.84e-07;36!UBERON:0004211;9.13e-07;10!UBERON:0009773;9.13e-07;10!UBERON:0001231;9.13e-07;10!UBERON:0004810;9.13e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.99e-12,9;UBERON:0001013,3.00e-09,14;UBERON:0004905,1.80e-08,8;UBERON:0000982,1.80e-08,8;UBERON:0004770,1.80e-08,8 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,6.00439790118782,0,1.74467704820074,0,4.42203911398782,1.56711376919903,0,0,0,0,5.19818682432196,5.96515276310248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75885711438329,11.5307719446255,9.99440980829684,19.0868627292264,20.9252994230133,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,5.96366342034382,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38015249986484,2.46612447151906,2.26622122115384,3.79217178096071,0,0,0,0,0,20.9337113245746,8.62341770179486,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,3.34932702059318,13.4004136558745,4.72573730275545,12.277062650311,0,0,0,0,0,9.15627198476633,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,9.58285080322736,9.4407426443737,7.47134192638794,11.3602791914366,9.58669554006587,11.8635309555548,8.22470979777003,9.02618739576592,10.3881732375525,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,2.01057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03443756959773,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,1.77794104018073,5.34783795781589,1.17217447210047,8.55362230113526,1.13110241973656,6.00686115687835,5.71652865261156,0,0.43596006883328,0,3.87815147273333,7.15312891703765,6.762422020448,0,0,16.4612719527771,0,6.92697665441858,0,5.42621605391443,5.76268235746538,7.49193223875591,0,7.91951872933429,0,0,0,0,0,0,0,0,2.85273810081437,4.48822050669496,2.05476322550383,6.26713371339634,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,3.0672872929785,5.00170521059677,5.15403545029498,0,0,0,0,0,4.5481500811197,2.0694614258501,12.6202863721733,0.368738337083406,2.34585759063824,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.256278298511402,3.58195074346692,0.160853921143607,0,4.78050050788232,5.14929003408069,3.85997633264903,0,4.76462551685833,0,0,0,0,0.182091168006717,0,1.35359883872224,1.5403067420883,3.13739907670742,2.92278449306521,1.05551628892876,0,0,3.02282282542995,0,4.6060894382455,3.01013864312912,5.86215428003588,0,4.70136984916574,0,0,0,0,0,0.103041011647722,2.93022287418699,3.79543699634705,0.574265537996172,1.30012049207304,0,2.99679226705578,0.154048617114644,0.15350367472613,2.48105830472155,5.80069322288678,4.78555089916954,2.13066568540252,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,2.68084838594413,4.22600587027022,0,0,0,0,0,0,0,0,11.9717122407995,6.50629346009475,7.32408566583828,8.89150383665119,4.91245205065606,14.26684205925,0,17.3108260944085,3.29294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,4.48661098735387,0.962479855263359,2.69544237579135,0,0,0,0.318852545457645,0,0,0,0,0,1.36940807419915,1.88015874927628,0,0,0,0,0,0,0,0,0,4.10315000344285,0,0,0,0,0,3.36852972734796,2.3441308683503,4.36897878298248,0,5.39858678932185,0,0,0,0,0,0,0,5.48926061132783,2.78947183551498,0,3.77899121781414,0,0,0,0,0,0,0.394573622547734,0,27.7842475361592,0,0,0,0,4.023159999825,0,0,0,3.54581522651905,1.37897349296586,0,0.694499979733169,0,0,0,0,0,0,20.6983080686081,2.37020365273626,0.384751292518985,0,0,0.448788222048861,0.325942115766024,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,11.6486725331036,0,0,0,1.92199335066233,0,9.96590212277577,7.82055692822185,8.29366116237413,0,3.08896443420251,0,3.15196426687527,1.9871461170299,0,1.75996244461323,0.160317640503067,0,0.599428828746391,17.8672117271091,2.97795150031381,0,0,0,0,1.76675467895698,4.91633377667966,18.7676720450832,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,4.72451911270794,0,0,0,0,0,0,0,0,0,2.34804281319486,8.03818214451821,2.41291105420991,0,0,4.41404953834724,0,0,0,0,0,0,1.19730191562487,0,1.87426823963964,2.60617810496289,0,0,0,0,0,0,0,0,0,0,1.7785046870815,0,3.83004754662109,1.63205341010842,1.7548292581589,3.67614692116154,4.26234419922746,0,0,0,0,0,0,0,0,0,2.12308764558307,0,1.88212655758537,0,0.28984205722165,5.52242770681434,1.16856654923612,6.65767033803136,10.7959713006801,6.54076544556695,11.567545880755,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0.601030435988874,0.380805212168795,0,0,0.751873899297419,0.928067519756987,0.796191777397232,0,5.83772698810748,5.72474130902062,0,3.46715694733146,0,0,0,8.56633154998186,0,0,0,14.6920313217734,0.883445729729405,0,0,0,0,1.21543982470953,0,0,0,0,5.56936743038901,0.983091635014877,4.43755459053117,0,0,0,0,6.44370825881442,0,0,0,0,0.314531883711793,0.436838552768056,0.848662649770126,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00553364355231,2.00548529691159,0,2.19498765685643,3.05105676373734,6.90359926060101,2.98374333174412,0.977734268540344,9.27843316036192,0,0,0,5.91424344868181,0,0,0,0,0,0,2.481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| |||
|short_description=p3@HOXC10 | |||
}} |
Revision as of 13:47, 11 January 2014
Short description: | p3@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 190bp_to_ENST00000513413_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.02e-11 | 9 |
carbohydrate secreting cell | 8.02e-11 | 9 |
mesenchymal stem cell of adipose | 5.15e-09 | 8 |
chondroblast | 2.21e-08 | 6 |
chondrocyte | 2.21e-08 | 6 |
stromal cell | 6.67e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.99e-12 | 9 |
adipose tissue | 3.00e-09 | 14 |
articulation | 1.80e-08 | 8 |
skeletal joint | 1.80e-08 | 8 |
articular system | 1.80e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.23e-09 | 143 |