FFCP PHASE1:Hg19::chr12:54447026..54447038,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr12:54447026..54447038,+ | |||
|id=chr12:54447026..54447038,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.62e-21!24;CL:0000826!1.62e-21!24;CL:0000542!1.40e-16!53;CL:0000051!1.40e-16!53;CL:0000838!2.18e-15!52;CL:1000507!6.81e-12!12;CL:1000494!6.81e-12!12;CL:0000236!1.96e-08!14;CL:1000449!2.08e-08!16;CL:1000497!2.95e-07!18;CL:0002518!2.95e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.73e-61;24!CL:0000317;1.56e-21;2!CL:1000448;1.56e-21;2!CL:0002308;1.56e-21;2!CL:0002140;1.56e-21;2!CL:0000542;1.69e-18;53!CL:0000236;5.26e-13;13!CL:0000946;6.26e-12;1!CL:0000785;6.26e-12;1!CL:0000819;6.26e-12;1!CL:0000786;6.26e-12;1!CL:0000622;3.44e-09;5!CL:0000154;8.41e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.59e-61,24;CL:0000826,2.59e-61,24;CL:0000542,1.31e-31,53;CL:0000051,1.31e-31,53;CL:0000838,1.92e-27,52;CL:0000785,4.86e-22,2;CL:0000955,4.86e-22,2;CL:0000818,4.86e-22,2;CL:0000954,4.86e-22,2;CL:0000816,4.86e-22,2;CL:0000317,1.26e-21,2;CL:1000448,1.26e-21,2;CL:0002308,1.26e-21,2;CL:0002140,1.26e-21,2;CL:0000236,1.68e-18,14;CL:0000817,4.94e-15,3;CL:0002087,2.01e-13,115;CL:0000946,6.26e-12,1;CL:0000786,6.26e-12,1;CL:0000980,6.26e-12,1;CL:0000819,6.97e-12,1;CL:0000738,4.57e-11,136;CL:0002031,8.42e-11,120;CL:0000622,3.17e-09,5;CL:0002032,4.73e-09,161;CL:0000837,4.73e-09,161;CL:0000037,1.36e-08,168;CL:0000988,4.66e-08,177;CL:0000154,7.85e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000954;4.36e-22;2!CL:0000051;1.69e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.57e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.66e-26;10!DOID:630;4.29e-12;1!DOID:0050177;4.29e-12;1!DOID:0050427;4.29e-12;1!DOID:0060073;6.26e-12;1!DOID:8675;6.26e-12;1!DOID:12603;1.19e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.67e-26,10;DOID:630,4.53e-12,1;DOID:0050177,4.53e-12,1;DOID:0050427,4.53e-12,1;DOID:0060073,6.97e-12,1;DOID:8675,6.97e-12,1;DOID:12603,1.32e-11,1;DOID:2531,4.98e-07,51;DOID:0060083,4.98e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0009773!6.81e-12!12;UBERON:0001231!6.81e-12!12;UBERON:0004810!6.81e-12!12;UBERON:0003887!4.03e-09!21;UBERON:0004211!2.08e-08!16;UBERON:0001285!2.08e-08!16;UBERON:0007684!2.08e-08!16;UBERON:0003220!2.08e-08!16;UBERON:0004208!2.08e-08!16;UBERON:0001851!5.91e-08!16;UBERON:0006555!8.49e-08!17;UBERON:0005103!8.49e-08!17;UBERON:0000083!8.49e-08!17;UBERON:0009201!8.49e-08!17;UBERON:0004819!8.49e-08!17;UBERON:0006553!8.49e-08!17;UBERON:0003074!8.49e-08!17;UBERON:0003060!8.49e-08!17;UBERON:0000080!2.95e-07!18;UBERON:0002120!2.95e-07!18;UBERON:0004875!2.95e-07!18;UBERON:0005721!2.95e-07!18;UBERON:0005754!2.95e-07!18;UBERON:0007297!2.95e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.56e-21;2!UBERON:0007771;1.56e-21;2!UBERON:0003297;1.56e-21;2!UBERON:0001821;1.56e-21;2!UBERON:0003487;1.56e-21;2!UBERON:0001820;1.56e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.26e-21,2;UBERON:0007771,1.26e-21,2;UBERON:0003297,1.26e-21,2;UBERON:0001821,1.26e-21,2;UBERON:0003487,1.26e-21,2;UBERON:0001820,1.26e-21,2;UBERON:0005089,1.26e-21,2;UBERON:0005088,1.26e-21,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,6.64796630007176,6.23964479819588,6.69041641166274,0,0,0,0,0,0,2.78881922089086,1.70603078984906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,1.77901850772711,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.581267877027924,0.383382679165211,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0.896681151948218,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.616122696835318,0.784349769176855,0,0.844413031143006,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,1.30062222588003,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.00700268137233,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.941798755221676,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,3.95223263795889,3.0448149595224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0.989464650708862,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,3.39799930144758,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,1.13668047327359,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.26940821205835,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,3.20568492303233 | |||
|short_description=p@chr12:54447026..54447038,+ | |||
}} |
Revision as of 13:48, 11 January 2014
Short description: | p@chr12:54447026..54447038, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54447026..54447038, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.59e-61 | 24 |
pro-B cell | 2.59e-61 | 24 |
lymphocyte | 1.31e-31 | 53 |
common lymphoid progenitor | 1.31e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.92e-27 | 52 |
mature B cell | 4.86e-22 | 2 |
pre-B-II cell | 4.86e-22 | 2 |
transitional stage B cell | 4.86e-22 | 2 |
small pre-B-II cell | 4.86e-22 | 2 |
immature B cell | 4.86e-22 | 2 |
sebum secreting cell | 1.26e-21 | 2 |
epithelial cell of sweat gland | 1.26e-21 | 2 |
epithelial cell of skin gland | 1.26e-21 | 2 |
acinar cell of sebaceous gland | 1.26e-21 | 2 |
B cell | 1.68e-18 | 14 |
precursor B cell | 4.94e-15 | 3 |
nongranular leukocyte | 2.01e-13 | 115 |
antibody secreting cell | 6.26e-12 | 1 |
plasma cell | 6.26e-12 | 1 |
plasmablast | 6.26e-12 | 1 |
B-1 B cell | 6.97e-12 | 1 |
leukocyte | 4.57e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 8.42e-11 | 120 |
acinar cell | 3.17e-09 | 5 |
hematopoietic oligopotent progenitor cell | 4.73e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-09 | 161 |
hematopoietic stem cell | 1.36e-08 | 168 |
hematopoietic cell | 4.66e-08 | 177 |
protein secreting cell | 7.85e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.26e-21 | 2 |
epidermis gland | 1.26e-21 | 2 |
gland of integumental system | 1.26e-21 | 2 |
sebaceous gland | 1.26e-21 | 2 |
skin sebaceous gland | 1.26e-21 | 2 |
sweat gland | 1.26e-21 | 2 |
sweat gland placode | 1.26e-21 | 2 |
sebaceous gland placode | 1.26e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.67e-26 | 10 |
genetic disease | 4.53e-12 | 1 |
monogenic disease | 4.53e-12 | 1 |
xeroderma pigmentosum | 4.53e-12 | 1 |
lymphatic system cancer | 6.97e-12 | 1 |
lymphosarcoma | 6.97e-12 | 1 |
acute leukemia | 1.32e-11 | 1 |
hematologic cancer | 4.98e-07 | 51 |
immune system cancer | 4.98e-07 | 51 |